RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 IDI1Q13907 227 aa15.41■□□□□ 0.06
SCG3-202ENST00000542355 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
SCG3-202ENST00000542355 ZC3H13Q5T200 1668 aaKnown RBP15.4■□□□□ 0.06
SCG3-202ENST00000542355 CFAP65Q6ZU64 1925 aaKnown RBP15.39■□□□□ 0.06
SCG3-202ENST00000542355 ST20-MTHFSA0A0A6YYL1 179 aa15.39■□□□□ 0.05
SCG3-202ENST00000542355 SLC52A1Q9NWF4 448 aa15.39■□□□□ 0.05
SCG3-202ENST00000542355 NEURL4Q96JN8 1562 aa15.38■□□□□ 0.05
SCG3-202ENST00000542355 ADGRF5Q8IZF2 1346 aa15.38■□□□□ 0.05
SCG3-202ENST00000542355 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
SCG3-202ENST00000542355 TRPM1Q7Z4N2 1603 aa15.37■□□□□ 0.05
SCG3-202ENST00000542355 CCDC7Q96M83 1385 aa15.37■□□□□ 0.05
SCG3-202ENST00000542355 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
SCG3-202ENST00000542355 SYNMO15061 1565 aa15.36■□□□□ 0.05
SCG3-202ENST00000542355 ADGRB3O60242 1522 aa15.35■□□□□ 0.05
SCG3-202ENST00000542355 KIF1BO60333 1816 aa15.35■□□□□ 0.05
SCG3-202ENST00000542355 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
SCG3-202ENST00000542355 RPGRIP1LQ68CZ1 1315 aa15.34■□□□□ 0.05
SCG3-202ENST00000542355 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
SCG3-202ENST00000542355 ZMYM3Q14202 1370 aa15.34■□□□□ 0.05
SCG3-202ENST00000542355 MADDQ8WXG6 1647 aa15.33■□□□□ 0.04
SCG3-202ENST00000542355 NUTM2DQ5VT03 806 aaPredicted RBP15.33■□□□□ 0.04
SCG3-202ENST00000542355 ERVK-7P63135 1459 aa15.33■□□□□ 0.04
SCG3-202ENST00000542355 MYOM2P54296 1465 aa15.32■□□□□ 0.04
SCG3-202ENST00000542355 MROH2AA6NES4 1674 aa15.32■□□□□ 0.04
SCG3-202ENST00000542355 CLTCQ00610 1675 aaKnown RBP15.32■□□□□ 0.04
SCG3-202ENST00000542355 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
SCG3-202ENST00000542355 PIK3C2BO00750 1634 aa15.31■□□□□ 0.04
SCG3-202ENST00000542355 ANP32CO43423 234 aa15.31■□□□□ 0.04
SCG3-202ENST00000542355 PREX1Q8TCU6 1659 aa15.31■□□□□ 0.04
SCG3-202ENST00000542355 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
SCG3-202ENST00000542355 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.04
SCG3-202ENST00000542355 TESK2Q96S53 571 aa15.27■□□□□ 0.04
SCG3-202ENST00000542355 LAMC1P11047 1609 aa15.27■□□□□ 0.03
SCG3-202ENST00000542355 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
SCG3-202ENST00000542355 SPATA31D1Q6ZQQ2 1576 aa15.26■□□□□ 0.03
SCG3-202ENST00000542355 YTHDC1Q96MU7 727 aaKnown RBP15.25■□□□□ 0.03
SCG3-202ENST00000542355 PIK3C2GO75747 1445 aa15.25■□□□□ 0.03
SCG3-202ENST00000542355 SCAF11Q99590 1463 aaKnown RBP15.25■□□□□ 0.03
SCG3-202ENST00000542355 CEBPAP49715 358 aaPredicted RBP15.25■□□□□ 0.03
SCG3-202ENST00000542355 IFT172Q9UG01 1749 aa15.25■□□□□ 0.03
SCG3-202ENST00000542355 TMEM132EQ6IEE7 984 aa15.24■□□□□ 0.03
SCG3-202ENST00000542355 TMEM131LA2VDJ0 1609 aa15.23■□□□□ 0.03
SCG3-202ENST00000542355 NEXMIFQ5QGS0 1516 aa15.23■□□□□ 0.03
SCG3-202ENST00000542355 TMF1P82094 1093 aa15.23■□□□□ 0.03
SCG3-202ENST00000542355 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
SCG3-202ENST00000542355 PPLO60437 1756 aa15.23■□□□□ 0.03
SCG3-202ENST00000542355 TNRQ92752 1358 aa15.21■□□□□ 0.03
SCG3-202ENST00000542355 EIF3AQ14152 1382 aaKnown RBP15.21■□□□□ 0.03
SCG3-202ENST00000542355 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
SCG3-202ENST00000542355 HOMEZQ8IX15 550 aa15.21■□□□□ 0.02
SCG3-202ENST00000542355 TRAK1Q9UPV9 953 aa15.21■□□□□ 0.02
SCG3-202ENST00000542355 ZFYVE9O95405 1425 aa15.21■□□□□ 0.02
SCG3-202ENST00000542355 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
SCG3-202ENST00000542355 A2ML1A8K2U0 1454 aa15.2■□□□□ 0.02
SCG3-202ENST00000542355 POLR1AO95602 1720 aaPredicted RBP15.19■□□□□ 0.02
SCG3-202ENST00000542355 CCER2I3L3R5 266 aa15.18■□□□□ 0.02
SCG3-202ENST00000542355 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
SCG3-202ENST00000542355 CNGB1Q14028 1251 aaPredicted RBP15.17■□□□□ 0.02
SCG3-202ENST00000542355 MYO5BQ9ULV0 1848 aa15.16■□□□□ 0.02
SCG3-202ENST00000542355 VSIG10Q8N0Z9 540 aa15.16■□□□□ 0.02
SCG3-202ENST00000542355 PRKRIP1Q9H875 184 aaPredicted RBP15.16■□□□□ 0.02
SCG3-202ENST00000542355 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
SCG3-202ENST00000542355 SETBP1Q9Y6X0 1596 aa15.16■□□□□ 0.02
SCG3-202ENST00000542355 ADGRB1O14514 1584 aa15.15■□□□□ 0.02
SCG3-202ENST00000542355 GTF3C3Q9Y5Q9 886 aa15.15■□□□□ 0.02
SCG3-202ENST00000542355 CDCA8Q53HL2 280 aa15.14■□□□□ 0.01
SCG3-202ENST00000542355 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCG3-202ENST00000542355 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
SCG3-202ENST00000542355 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
SCG3-202ENST00000542355 STK26Q9P289 416 aa15.14■□□□□ 0.01
SCG3-202ENST00000542355 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
SCG3-202ENST00000542355 PANK3Q9H999 370 aa15.11■□□□□ 0.01
SCG3-202ENST00000542355 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
SCG3-202ENST00000542355 FER1L4A9Z1Z3 1794 aa15.1■□□□□ 0.01
SCG3-202ENST00000542355 NLRP1Q9C000 1473 aa15.1■□□□□ 0.01
SCG3-202ENST00000542355 PER1O15534 1290 aaPredicted RBP15.09■□□□□ 0.01
SCG3-202ENST00000542355 C3P01024 1663 aa15.09■□□□□ 0.01
SCG3-202ENST00000542355 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0.01
SCG3-202ENST00000542355 ALKQ9UM73 1620 aa15.08■□□□□ 0
SCG3-202ENST00000542355 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
SCG3-202ENST00000542355 LTKP29376 864 aa15.07■□□□□ 0
SCG3-202ENST00000542355 CCDC184Q52MB2 194 aa15.07■□□□□ 0
SCG3-202ENST00000542355 TXNDC2Q86VQ3 553 aa15.07■□□□□ 0
SCG3-202ENST00000542355 YTHDC2Q9H6S0 1430 aaKnown RBP15.06■□□□□ 0
SCG3-202ENST00000542355 ASXL1Q8IXJ9 1541 aa15.06■□□□□ 0
SCG3-202ENST00000542355 PRAM1Q96QH2 718 aa15.05■□□□□ 0
SCG3-202ENST00000542355 POGKQ9P215 609 aa15.05■□□□□ 0
SCG3-202ENST00000542355 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
SCG3-202ENST00000542355 EID1Q9Y6B2 187 aa15.05■□□□□ -0
SCG3-202ENST00000542355 UBR1Q8IWV7 1749 aa15.04■□□□□ -0
SCG3-202ENST00000542355 MYO3AQ8NEV4 1616 aa15.04■□□□□ -0
SCG3-202ENST00000542355 MRS2Q9HD23 443 aa15.03■□□□□ -0
SCG3-202ENST00000542355 PTPRMP28827 1452 aa15.03■□□□□ -0
SCG3-202ENST00000542355 METP08581 1390 aa15.02■□□□□ -0
SCG3-202ENST00000542355 EVC2Q86UK5 1308 aa15.02■□□□□ -0
SCG3-202ENST00000542355 KDM5AP29375 1690 aaKnown RBP15.02□□□□□ -0.01
SCG3-202ENST00000542355 CC2D1BQ5T0F9 858 aaKnown RBP15.02□□□□□ -0.01
SCG3-202ENST00000542355 RALBP1Q15311 655 aa15.01□□□□□ -0.01
SCG3-202ENST00000542355 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
SCG3-202ENST00000542355 RIMS1Q86UR5 1692 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms