RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 CCDC144AA2RUR9 1427 aa32.51■■■□□ 2.8
TRIM65-202ENST00000540128 ANKRD30BQ9BXX2 1392 aa32.51■■■□□ 2.79
TRIM65-202ENST00000540128 KIF1BO60333 1816 aa32.46■■■□□ 2.79
TRIM65-202ENST00000540128 IQGAP1P46940 1657 aa32.45■■■□□ 2.79
TRIM65-202ENST00000540128 ZNF326Q5BKZ1 582 aaKnown RBP32.44■■■□□ 2.78
TRIM65-202ENST00000540128 RPGRIP1LQ68CZ1 1315 aa32.43■■■□□ 2.78
TRIM65-202ENST00000540128 PLEKHG1Q9ULL1 1385 aa32.43■■■□□ 2.78
TRIM65-202ENST00000540128 SPATA31E1Q6ZUB1 1445 aa32.42■■■□□ 2.78
TRIM65-202ENST00000540128 PPP1R15AO75807 674 aaPredicted RBP32.41■■■□□ 2.78
TRIM65-202ENST00000540128 NUTM2DQ5VT03 806 aaPredicted RBP32.38■■■□□ 2.77
TRIM65-202ENST00000540128 ZNF335Q9H4Z2 1342 aaPredicted RBP32.37■■■□□ 2.77
TRIM65-202ENST00000540128 NEXMIFQ5QGS0 1516 aa32.36■■■□□ 2.77
TRIM65-202ENST00000540128 LTBP4Q8N2S1 1624 aa32.34■■■□□ 2.77
TRIM65-202ENST00000540128 VGFO15240 615 aaPredicted RBP32.32■■■□□ 2.76
TRIM65-202ENST00000540128 SLC26A8Q96RN1 970 aa32.32■■■□□ 2.76
TRIM65-202ENST00000540128 TBX22Q9Y458 520 aa32.32■■■□□ 2.76
TRIM65-202ENST00000540128 RGL3Q3MIN7 710 aa32.31■■■□□ 2.76
TRIM65-202ENST00000540128 ILDR1Q86SU0 546 aaPredicted RBP32.31■■■□□ 2.76
TRIM65-202ENST00000540128 BCANQ96GW7 911 aa32.31■■■□□ 2.76
TRIM65-202ENST00000540128 PCGF6Q9BYE7 350 aa32.3■■■□□ 2.76
TRIM65-202ENST00000540128 ADAMTS13Q76LX8 1427 aa32.29■■■□□ 2.76
TRIM65-202ENST00000540128 DHX57Q6P158 1386 aaKnown RBP32.29■■■□□ 2.76
TRIM65-202ENST00000540128 CERKQ8TCT0 537 aa32.28■■■□□ 2.76
TRIM65-202ENST00000540128 SETBP1Q9Y6X0 1596 aa32.23■■■□□ 2.75
TRIM65-202ENST00000540128 PPLO60437 1756 aa32.22■■■□□ 2.75
TRIM65-202ENST00000540128 KCNA6P17658 529 aa32.22■■■□□ 2.75
TRIM65-202ENST00000540128 SENP3Q9H4L4 574 aaPredicted RBP32.21■■■□□ 2.75
TRIM65-202ENST00000540128 CPS1P31327 1500 aa32.21■■■□□ 2.75
TRIM65-202ENST00000540128 PIK3R4Q99570 1358 aa32.19■■■□□ 2.74
TRIM65-202ENST00000540128 DIP2AQ14689 1571 aa32.19■■■□□ 2.74
TRIM65-202ENST00000540128 ADGRF5Q8IZF2 1346 aa32.18■■■□□ 2.74
TRIM65-202ENST00000540128 NRXN3Q9Y4C0 1643 aa32.18■■■□□ 2.74
TRIM65-202ENST00000540128 STAC3Q96MF2 364 aa32.15■■■□□ 2.74
TRIM65-202ENST00000540128 IFT172Q9UG01 1749 aa32.14■■■□□ 2.74
TRIM65-202ENST00000540128 STRCP1A6NGW2 1772 aa32.14■■■□□ 2.74
TRIM65-202ENST00000540128 IQSEC2Q5JU85 1478 aa32.14■■■□□ 2.74
TRIM65-202ENST00000540128 MYOM2P54296 1465 aa32.1■■■□□ 2.73
TRIM65-202ENST00000540128 NRXN1Q9ULB1 1477 aa32.1■■■□□ 2.73
TRIM65-202ENST00000540128 METP08581 1390 aa32.09■■■□□ 2.73
TRIM65-202ENST00000540128 NWD1Q149M9 1564 aa32.09■■■□□ 2.73
TRIM65-202ENST00000540128 LRRC7Q96NW7 1537 aa32.09■■■□□ 2.73
TRIM65-202ENST00000540128 CHD2O14647 1828 aaKnown RBP32.09■■■□□ 2.73
TRIM65-202ENST00000540128 SIN3AQ96ST3 1273 aa32.08■■■□□ 2.73
TRIM65-202ENST00000540128 DCAF11Q8TEB1 546 aa32.07■■■□□ 2.72
TRIM65-202ENST00000540128 PIK3C2GO75747 1445 aa32.07■■■□□ 2.72
TRIM65-202ENST00000540128 ALKQ9UM73 1620 aa32.07■■■□□ 2.72
TRIM65-202ENST00000540128 NKTRP30414 1462 aaKnown RBP32.05■■■□□ 2.72
TRIM65-202ENST00000540128 PTPRUQ92729 1446 aa32.05■■■□□ 2.72
TRIM65-202ENST00000540128 AMOTL2Q9Y2J4 779 aa32.04■■■□□ 2.72
TRIM65-202ENST00000540128 C14orf93Q9H972 538 aaKnown RBP32.03■■■□□ 2.72
TRIM65-202ENST00000540128 PROSER2Q86WR7 435 aaPredicted RBP32.02■■■□□ 2.72
TRIM65-202ENST00000540128 KDM2AQ9Y2K7 1162 aa32.01■■■□□ 2.71
TRIM65-202ENST00000540128 SETD1AO15047 1707 aaKnown RBP32■■■□□ 2.71
TRIM65-202ENST00000540128 FBXO41Q8TF61 875 aa32■■■□□ 2.71
TRIM65-202ENST00000540128 NEUROD1Q13562 356 aa31.98■■■□□ 2.71
TRIM65-202ENST00000540128 TMEM94Q12767 1356 aa31.97■■■□□ 2.71
TRIM65-202ENST00000540128 NCOA3Q9Y6Q9 1424 aa31.95■■■□□ 2.71
TRIM65-202ENST00000540128 L3MBTL2Q969R5 705 aa31.95■■■□□ 2.71
TRIM65-202ENST00000540128 CFAP70Q5T0N1 1121 aa31.94■■■□□ 2.7
TRIM65-202ENST00000540128 XRN1Q8IZH2 1706 aaKnown RBP31.94■■■□□ 2.7
TRIM65-202ENST00000540128 PRAG1Q86YV5 1406 aa31.93■■■□□ 2.7
TRIM65-202ENST00000540128 XIRP1Q702N8 1843 aaKnown RBP31.89■■■□□ 2.7
TRIM65-202ENST00000540128 RBM33Q96EV2 1170 aaKnown RBP31.89■■■□□ 2.7
TRIM65-202ENST00000540128 CLSPNQ9HAW4 1339 aa31.89■■■□□ 2.7
TRIM65-202ENST00000540128 TMEM132EQ6IEE7 984 aa31.88■■■□□ 2.69
TRIM65-202ENST00000540128 LRPPRCP42704 1394 aaKnown RBP31.88■■■□□ 2.69
TRIM65-202ENST00000540128 ABCC11Q96J66 1382 aa31.87■■■□□ 2.69
TRIM65-202ENST00000540128 LAMC1P11047 1609 aa31.86■■■□□ 2.69
TRIM65-202ENST00000540128 ASXL1Q8IXJ9 1541 aa31.86■■■□□ 2.69
TRIM65-202ENST00000540128 PTCH1Q13635 1447 aa31.86■■■□□ 2.69
TRIM65-202ENST00000540128 UBAP1LF5GYI3 381 aa31.86■■■□□ 2.69
TRIM65-202ENST00000540128 TOM1O60784 492 aa31.85■■■□□ 2.69
TRIM65-202ENST00000540128 TECPR2O15040 1411 aa31.84■■■□□ 2.69
TRIM65-202ENST00000540128 ROBO2Q9HCK4 1378 aa31.83■■■□□ 2.69
TRIM65-202ENST00000540128 YTHDC2Q9H6S0 1430 aaKnown RBP31.83■■■□□ 2.69
TRIM65-202ENST00000540128 SIRT1Q96EB6 747 aa31.82■■■□□ 2.68
TRIM65-202ENST00000540128 C19orf44Q9H6X5 657 aa31.81■■■□□ 2.68
TRIM65-202ENST00000540128 ADGRB1O14514 1584 aa31.8■■■□□ 2.68
TRIM65-202ENST00000540128 MSH6P52701 1360 aa31.8■■■□□ 2.68
TRIM65-202ENST00000540128 STK26Q9P289 416 aa31.79■■■□□ 2.68
TRIM65-202ENST00000540128 TONSLQ96HA7 1378 aa31.76■■■□□ 2.67
TRIM65-202ENST00000540128 C14orf37Q86TY3 774 aa31.75■■■□□ 2.67
TRIM65-202ENST00000540128 FAM135BQ49AJ0 1406 aa31.73■■■□□ 2.67
TRIM65-202ENST00000540128 KIAA1210Q9ULL0 1709 aa31.72■■■□□ 2.67
TRIM65-202ENST00000540128 CCER1Q8TC90 406 aaPredicted RBP31.72■■■□□ 2.67
TRIM65-202ENST00000540128 KNDC1Q76NI1 1749 aa31.72■■■□□ 2.67
TRIM65-202ENST00000540128 CADPS2Q86UW7 1296 aa31.71■■■□□ 2.67
TRIM65-202ENST00000540128 ADGRL3Q9HAR2 1447 aa31.71■■■□□ 2.67
TRIM65-202ENST00000540128 WAPLQ7Z5K2 1190 aa31.7■■■□□ 2.67
TRIM65-202ENST00000540128 DCCP43146 1447 aa31.69■■■□□ 2.66
TRIM65-202ENST00000540128 NBPF1Q3BBV0 1214 aa31.69■■■□□ 2.66
TRIM65-202ENST00000540128 TIMELESSQ9UNS1 1208 aa31.69■■■□□ 2.66
TRIM65-202ENST00000540128 DLC1Q96QB1 1528 aa31.69■■■□□ 2.66
TRIM65-202ENST00000540128 ATF3P18847 181 aa31.67■■■□□ 2.66
TRIM65-202ENST00000540128 SLAIN2Q9P270 581 aa31.67■■■□□ 2.66
TRIM65-202ENST00000540128 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.66■■■□□ 2.66
TRIM65-202ENST00000540128 NBPF8Q3BBV2 869 aa31.66■■■□□ 2.66
TRIM65-202ENST00000540128 PIP4K2BP78356 416 aa31.65■■■□□ 2.66
TRIM65-202ENST00000540128 PLEKHH1Q9ULM0 1364 aa31.65■■■□□ 2.66
TRIM65-202ENST00000540128 TRAK1Q9UPV9 953 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms