RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 CIZ1Q9ULV3 898 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-211ENST00000539921 KIF3AQ9Y496 699 aa7.71□□□□□ -1.18
SNHG1-211ENST00000539921 CFAP65Q6ZU64 1925 aaKnown RBP7.71□□□□□ -1.18
SNHG1-211ENST00000539921 RAD50Q92878 1312 aa7.71□□□□□ -1.18
SNHG1-211ENST00000539921 BRD4O60885 1362 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-211ENST00000539921 PRXQ9BXM0 1461 aa7.7□□□□□ -1.18
SNHG1-211ENST00000539921 NLRP1Q9C000 1473 aa7.7□□□□□ -1.18
SNHG1-211ENST00000539921 RUSC2Q8N2Y8 1516 aa7.7□□□□□ -1.18
SNHG1-211ENST00000539921 TULP2O00295 520 aa7.7□□□□□ -1.18
SNHG1-211ENST00000539921 HSP90AB1P08238 724 aaKnown RBP7.7□□□□□ -1.18
SNHG1-211ENST00000539921 EIF4G2P78344 907 aaKnown RBP eCLIP7.7□□□□□ -1.18
SNHG1-211ENST00000539921 DHX37Q8IY37 1157 aaKnown RBP7.7□□□□□ -1.18
SNHG1-211ENST00000539921 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
SNHG1-211ENST00000539921 MAPK8IP3Q9UPT6 1336 aa7.7□□□□□ -1.18
SNHG1-211ENST00000539921 TRAK2O60296 914 aa7.69□□□□□ -1.18
SNHG1-211ENST00000539921 MFAP1P55081 439 aaKnown RBP7.69□□□□□ -1.18
SNHG1-211ENST00000539921 PDCL2Q8N4E4 241 aa7.69□□□□□ -1.18
SNHG1-211ENST00000539921 MYRIPQ8NFW9 859 aa7.69□□□□□ -1.18
SNHG1-211ENST00000539921 PDLIM2Q96JY6 352 aa7.69□□□□□ -1.18
SNHG1-211ENST00000539921 CFAP43Q8NDM7 1665 aa7.69□□□□□ -1.18
SNHG1-211ENST00000539921 HFM1A2PYH4 1435 aa7.69□□□□□ -1.18
SNHG1-211ENST00000539921 NCOA3Q9Y6Q9 1424 aa7.69□□□□□ -1.18
SNHG1-211ENST00000539921 RAPGEF2Q9Y4G8 1499 aa7.68□□□□□ -1.18
SNHG1-211ENST00000539921 FAM9BQ8IZU0 186 aa7.68□□□□□ -1.18
SNHG1-211ENST00000539921 EXOC6Q8TAG9 804 aa7.68□□□□□ -1.18
SNHG1-211ENST00000539921 CALCOCO1Q9P1Z2 691 aa7.68□□□□□ -1.18
SNHG1-211ENST00000539921 HDAC5Q9UQL6 1122 aa7.68□□□□□ -1.18
SNHG1-211ENST00000539921 SYCP1Q15431 976 aa7.67□□□□□ -1.18
SNHG1-211ENST00000539921 TIGD1Q96MW7 591 aa7.67□□□□□ -1.18
SNHG1-211ENST00000539921 ZKSCAN5Q9Y2L8 839 aa7.67□□□□□ -1.18
SNHG1-211ENST00000539921 DHX29Q7Z478 1369 aaKnown RBP7.67□□□□□ -1.18
SNHG1-211ENST00000539921 SPATA31E1Q6ZUB1 1445 aa7.67□□□□□ -1.18
SNHG1-211ENST00000539921 HECW1Q76N89 1606 aa7.67□□□□□ -1.18
SNHG1-211ENST00000539921 CLSTN1O94985 981 aa7.66□□□□□ -1.18
SNHG1-211ENST00000539921 IRX5P78411 483 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-211ENST00000539921 NBPF20Q3BBV1 942 aa7.66□□□□□ -1.18
SNHG1-211ENST00000539921 CLEC17AQ6ZS10 378 aa7.66□□□□□ -1.18
SNHG1-211ENST00000539921 USP19O94966 1318 aa7.66□□□□□ -1.18
SNHG1-211ENST00000539921 POLA1P09884 1462 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-211ENST00000539921 CC2D1BQ5T0F9 858 aaKnown RBP7.65□□□□□ -1.18
SNHG1-211ENST00000539921 LRRC9Q6ZRR7 1453 aa7.65□□□□□ -1.18
SNHG1-211ENST00000539921 TICAM2Q86XR7 235 aa7.65□□□□□ -1.18
SNHG1-211ENST00000539921 UPF2Q9HAU5 1272 aaKnown RBP7.65□□□□□ -1.18
SNHG1-211ENST00000539921 BRMS1Q9HCU9 246 aa7.65□□□□□ -1.18
SNHG1-211ENST00000539921 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.18
SNHG1-211ENST00000539921 NPC1L1Q9UHC9 1359 aa7.64□□□□□ -1.19
SNHG1-211ENST00000539921 HSPA5P11021 654 aaKnown RBP7.64□□□□□ -1.19
SNHG1-211ENST00000539921 NASPP49321 788 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-211ENST00000539921 CCDC184Q52MB2 194 aa7.64□□□□□ -1.19
SNHG1-211ENST00000539921 C14orf37Q86TY3 774 aa7.64□□□□□ -1.19
SNHG1-211ENST00000539921 PNISRQ8TF01 805 aaKnown RBP7.64□□□□□ -1.19
SNHG1-211ENST00000539921 GBP4Q96PP9 640 aa7.64□□□□□ -1.19
SNHG1-211ENST00000539921 SLC4A3P48751 1232 aa7.63□□□□□ -1.19
SNHG1-211ENST00000539921 ZNF445P59923 1031 aa7.63□□□□□ -1.19
SNHG1-211ENST00000539921 SETQ01105 290 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-211ENST00000539921 KANK4Q5T7N3 995 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-211ENST00000539921 CNPY4Q8N129 248 aa7.63□□□□□ -1.19
SNHG1-211ENST00000539921 OGFRQ9NZT2 677 aa7.63□□□□□ -1.19
SNHG1-211ENST00000539921 CCDC39Q9UFE4 941 aa7.63□□□□□ -1.19
SNHG1-211ENST00000539921 CECR2Q9BXF3 1484 aa7.62□□□□□ -1.19
SNHG1-211ENST00000539921 RGL2O15211 777 aa7.62□□□□□ -1.19
SNHG1-211ENST00000539921 APPP05067 770 aa7.62□□□□□ -1.19
SNHG1-211ENST00000539921 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-211ENST00000539921 SPRYD3Q8NCJ5 442 aa7.62□□□□□ -1.19
SNHG1-211ENST00000539921 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
SNHG1-211ENST00000539921 SLKQ9H2G2 1235 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-211ENST00000539921 CGNQ9P2M7 1197 aaKnown RBP7.62□□□□□ -1.19
SNHG1-211ENST00000539921 PTPN23Q9H3S7 1636 aa7.62□□□□□ -1.19
SNHG1-211ENST00000539921 FMN1Q68DA7 1419 aa7.61□□□□□ -1.19
SNHG1-211ENST00000539921 PRDM2Q13029 1718 aa7.61□□□□□ -1.19
SNHG1-211ENST00000539921 VGLL3A8MV65 326 aa7.61□□□□□ -1.19
SNHG1-211ENST00000539921 DDIT3P35638 169 aa7.61□□□□□ -1.19
SNHG1-211ENST00000539921 CARD10Q9BWT7 1032 aa7.61□□□□□ -1.19
SNHG1-211ENST00000539921 PRDM10Q9NQV6 1147 aa7.61□□□□□ -1.19
SNHG1-211ENST00000539921 CLASP1Q7Z460 1538 aa7.61□□□□□ -1.19
SNHG1-211ENST00000539921 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-211ENST00000539921 CGNL1Q0VF96 1302 aa7.6□□□□□ -1.19
SNHG1-211ENST00000539921 SOX12O15370 315 aa7.6□□□□□ -1.19
SNHG1-211ENST00000539921 KIF1CO43896 1103 aaKnown RBP7.6□□□□□ -1.19
SNHG1-211ENST00000539921 KLHL40Q2TBA0 621 aa7.6□□□□□ -1.19
SNHG1-211ENST00000539921 HSP90AB3PQ58FF7 597 aa7.6□□□□□ -1.19
SNHG1-211ENST00000539921 ANKRD7Q92527 254 aa7.6□□□□□ -1.19
SNHG1-211ENST00000539921 MYCBPQ99417 103 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-211ENST00000539921 NCAPGQ9BPX3 1015 aa7.6□□□□□ -1.19
SNHG1-211ENST00000539921 ANKRD30AQ9BXX3 1397 aa7.59□□□□□ -1.19
SNHG1-211ENST00000539921 KIF15Q9NS87 1388 aa7.59□□□□□ -1.19
SNHG1-211ENST00000539921 GOLGA6L22H0YM25 854 aa7.59□□□□□ -1.19
SNHG1-211ENST00000539921 NPM1P06748 294 aaKnown RBP eCLIP7.59□□□□□ -1.19
SNHG1-211ENST00000539921 WWC1Q8IX03 1113 aa7.59□□□□□ -1.19
SNHG1-211ENST00000539921 RBM28Q9NW13 759 aaKnown RBP7.59□□□□□ -1.19
SNHG1-211ENST00000539921 RAI14Q9P0K7 980 aa7.59□□□□□ -1.19
SNHG1-211ENST00000539921 AQRO60306 1485 aaKnown RBP eCLIP7.58□□□□□ -1.23e-14■■■■■ 45.6
SNHG1-211ENST00000539921 ARHGAP35Q9NRY4 1499 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 CHGAP10645 457 aaKnown RBP7.58□□□□□ -1.2
SNHG1-211ENST00000539921 KCNJ4P48050 445 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 KIAA2012Q0VF49 1180 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 ZNF771Q7L3S4 317 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-211ENST00000539921 RPAINQ86UA6 219 aa7.58□□□□□ -1.2
SNHG1-211ENST00000539921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.58□□□□□ -1.2
SNHG1-211ENST00000539921 SNX21Q969T3 373 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms