RNA–Protein interactions for RNA: ENST00000539611.1

ARF3-206, Transcript of ADP ribosylation factor 3, humanhuman

TSL 5

Gene ARF3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-206ENST00000539611 HRCP23327 699 aa31.75■■■□□ 2.67
ARF3-206ENST00000539611 ILDR1Q86SU0 546 aaPredicted RBP31.73■■■□□ 2.67
ARF3-206ENST00000539611 HDGFP51858 240 aaKnown RBP31.72■■■□□ 2.67
ARF3-206ENST00000539611 FBXO41Q8TF61 875 aa31.71■■■□□ 2.67
ARF3-206ENST00000539611 PLEKHG1Q9ULL1 1385 aa31.7■■■□□ 2.67
ARF3-206ENST00000539611 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.7■■■□□ 2.67
ARF3-206ENST00000539611 IQSEC2Q5JU85 1478 aa31.69■■■□□ 2.66
ARF3-206ENST00000539611 CPS1P31327 1500 aa31.68■■■□□ 2.66
ARF3-206ENST00000539611 PPP1R15AO75807 674 aaPredicted RBP31.66■■■□□ 2.66
ARF3-206ENST00000539611 NUTM2DQ5VT03 806 aaPredicted RBP31.65■■■□□ 2.66
ARF3-206ENST00000539611 SLC26A8Q96RN1 970 aa31.65■■■□□ 2.66
ARF3-206ENST00000539611 STRCP1A6NGW2 1772 aa31.65■■■□□ 2.66
ARF3-206ENST00000539611 KIF1BO60333 1816 aa31.63■■■□□ 2.65
ARF3-206ENST00000539611 ZNF326Q5BKZ1 582 aaKnown RBP31.62■■■□□ 2.65
ARF3-206ENST00000539611 NEXMIFQ5QGS0 1516 aa31.61■■■□□ 2.65
ARF3-206ENST00000539611 CCDC144AA2RUR9 1427 aa31.61■■■□□ 2.65
ARF3-206ENST00000539611 SENP3Q9H4L4 574 aaPredicted RBP31.59■■■□□ 2.65
ARF3-206ENST00000539611 ADAMTS13Q76LX8 1427 aa31.58■■■□□ 2.65
ARF3-206ENST00000539611 BCANQ96GW7 911 aa31.58■■■□□ 2.65
ARF3-206ENST00000539611 TBX22Q9Y458 520 aa31.56■■■□□ 2.64
ARF3-206ENST00000539611 LRRC7Q96NW7 1537 aa31.55■■■□□ 2.64
ARF3-206ENST00000539611 SPATA31E1Q6ZUB1 1445 aa31.55■■■□□ 2.64
ARF3-206ENST00000539611 KCNA6P17658 529 aa31.53■■■□□ 2.64
ARF3-206ENST00000539611 RPGRIP1LQ68CZ1 1315 aa31.52■■■□□ 2.64
ARF3-206ENST00000539611 NRXN3Q9Y4C0 1643 aa31.52■■■□□ 2.64
ARF3-206ENST00000539611 DIP2AQ14689 1571 aa31.51■■■□□ 2.64
ARF3-206ENST00000539611 SETBP1Q9Y6X0 1596 aa31.51■■■□□ 2.64
ARF3-206ENST00000539611 ANKRD30BQ9BXX2 1392 aa31.51■■■□□ 2.63
ARF3-206ENST00000539611 NWD1Q149M9 1564 aa31.51■■■□□ 2.63
ARF3-206ENST00000539611 VGFO15240 615 aaPredicted RBP31.45■■■□□ 2.63
ARF3-206ENST00000539611 PIK3R4Q99570 1358 aa31.44■■■□□ 2.62
ARF3-206ENST00000539611 PPLO60437 1756 aa31.44■■■□□ 2.62
ARF3-206ENST00000539611 NKTRP30414 1462 aaKnown RBP31.44■■■□□ 2.62
ARF3-206ENST00000539611 CHD2O14647 1828 aaKnown RBP31.44■■■□□ 2.62
ARF3-206ENST00000539611 TRIM26Q12899 539 aaPredicted RBP31.43■■■□□ 2.62
ARF3-206ENST00000539611 RGL3Q3MIN7 710 aa31.43■■■□□ 2.62
ARF3-206ENST00000539611 UBAP1LF5GYI3 381 aa31.4■■■□□ 2.62
ARF3-206ENST00000539611 XIRP1Q702N8 1843 aaKnown RBP31.39■■■□□ 2.62
ARF3-206ENST00000539611 PTPRUQ92729 1446 aa31.39■■■□□ 2.62
ARF3-206ENST00000539611 TMEM94Q12767 1356 aa31.38■■■□□ 2.61
ARF3-206ENST00000539611 METP08581 1390 aa31.37■■■□□ 2.61
ARF3-206ENST00000539611 IFT172Q9UG01 1749 aa31.37■■■□□ 2.61
ARF3-206ENST00000539611 ALKQ9UM73 1620 aa31.36■■■□□ 2.61
ARF3-206ENST00000539611 PROSER2Q86WR7 435 aaPredicted RBP31.36■■■□□ 2.61
ARF3-206ENST00000539611 ADGRF5Q8IZF2 1346 aa31.34■■■□□ 2.61
ARF3-206ENST00000539611 RBM33Q96EV2 1170 aaKnown RBP31.32■■■□□ 2.6
ARF3-206ENST00000539611 AMOTL2Q9Y2J4 779 aa31.32■■■□□ 2.6
ARF3-206ENST00000539611 SETD1AO15047 1707 aaKnown RBP31.32■■■□□ 2.6
ARF3-206ENST00000539611 TOM1O60784 492 aa31.31■■■□□ 2.6
ARF3-206ENST00000539611 XRN1Q8IZH2 1706 aaKnown RBP31.29■■■□□ 2.6
ARF3-206ENST00000539611 PIK3C2GO75747 1445 aa31.25■■■□□ 2.59
ARF3-206ENST00000539611 MYOM2P54296 1465 aa31.25■■■□□ 2.59
ARF3-206ENST00000539611 NRXN1Q9ULB1 1477 aa31.25■■■□□ 2.59
ARF3-206ENST00000539611 NCOA3Q9Y6Q9 1424 aa31.24■■■□□ 2.59
ARF3-206ENST00000539611 PIP4K2BP78356 416 aa31.2■■■□□ 2.59
ARF3-206ENST00000539611 PRAG1Q86YV5 1406 aa31.18■■■□□ 2.58
ARF3-206ENST00000539611 MSH6P52701 1360 aa31.17■■■□□ 2.58
ARF3-206ENST00000539611 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
ARF3-206ENST00000539611 ASXL1Q8IXJ9 1541 aa31.15■■■□□ 2.58
ARF3-206ENST00000539611 SCAF1Q9H7N4 1312 aaKnown RBP31.15■■■□□ 2.58
ARF3-206ENST00000539611 PTCH1Q13635 1447 aa31.15■■■□□ 2.58
ARF3-206ENST00000539611 C14orf93Q9H972 538 aaKnown RBP31.14■■■□□ 2.58
ARF3-206ENST00000539611 DCAF11Q8TEB1 546 aa31.12■■■□□ 2.57
ARF3-206ENST00000539611 ROBO2Q9HCK4 1378 aa31.12■■■□□ 2.57
ARF3-206ENST00000539611 C19orf44Q9H6X5 657 aa31.11■■■□□ 2.57
ARF3-206ENST00000539611 STAC3Q96MF2 364 aa31.1■■■□□ 2.57
ARF3-206ENST00000539611 CFAP70Q5T0N1 1121 aa31.09■■■□□ 2.57
ARF3-206ENST00000539611 TMEM132EQ6IEE7 984 aa31.09■■■□□ 2.57
ARF3-206ENST00000539611 C14orf37Q86TY3 774 aa31.09■■■□□ 2.57
ARF3-206ENST00000539611 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.08■■■□□ 2.57
ARF3-206ENST00000539611 KDM2AQ9Y2K7 1162 aa31.08■■■□□ 2.57
ARF3-206ENST00000539611 LRPPRCP42704 1394 aaKnown RBP31.07■■■□□ 2.56
ARF3-206ENST00000539611 TECPR2O15040 1411 aa31.07■■■□□ 2.56
ARF3-206ENST00000539611 FAM135BQ49AJ0 1406 aa31.07■■■□□ 2.56
ARF3-206ENST00000539611 LAMC1P11047 1609 aa31.06■■■□□ 2.56
ARF3-206ENST00000539611 HSPA1LP34931 641 aa31.05■■■□□ 2.56
ARF3-206ENST00000539611 ADGRL3Q9HAR2 1447 aa31.05■■■□□ 2.56
ARF3-206ENST00000539611 ABCC11Q96J66 1382 aa31.05■■■□□ 2.56
ARF3-206ENST00000539611 SIN3AQ96ST3 1273 aa31.04■■■□□ 2.56
ARF3-206ENST00000539611 SLAIN2Q9P270 581 aa31.04■■■□□ 2.56
ARF3-206ENST00000539611 DCCP43146 1447 aa31.04■■■□□ 2.56
ARF3-206ENST00000539611 CADPS2Q86UW7 1296 aa31.03■■■□□ 2.56
ARF3-206ENST00000539611 YTHDC2Q9H6S0 1430 aaKnown RBP31.03■■■□□ 2.56
ARF3-206ENST00000539611 NALCNQ8IZF0 1738 aa31.01■■■□□ 2.55
ARF3-206ENST00000539611 ATF3P18847 181 aa31■■■□□ 2.55
ARF3-206ENST00000539611 STK26Q9P289 416 aa31■■■□□ 2.55
ARF3-206ENST00000539611 KNDC1Q76NI1 1749 aa31■■■□□ 2.55
ARF3-206ENST00000539611 ADGRB1O14514 1584 aa30.99■■■□□ 2.55
ARF3-206ENST00000539611 ROBO1Q9Y6N7 1651 aa30.98■■■□□ 2.55
ARF3-206ENST00000539611 WAPLQ7Z5K2 1190 aa30.94■■■□□ 2.54
ARF3-206ENST00000539611 SIRT1Q96EB6 747 aa30.94■■■□□ 2.54
ARF3-206ENST00000539611 PLEKHH1Q9ULM0 1364 aa30.93■■■□□ 2.54
ARF3-206ENST00000539611 MST1RQ04912 1400 aa30.93■■■□□ 2.54
ARF3-206ENST00000539611 L3MBTL2Q969R5 705 aa30.93■■■□□ 2.54
ARF3-206ENST00000539611 NEUROD1Q13562 356 aa30.92■■■□□ 2.54
ARF3-206ENST00000539611 PCGF6Q9BYE7 350 aa30.92■■■□□ 2.54
ARF3-206ENST00000539611 DLC1Q96QB1 1528 aa30.88■■■□□ 2.53
ARF3-206ENST00000539611 CDC42BPGQ6DT37 1551 aa30.84■■■□□ 2.53
ARF3-206ENST00000539611 BRINP3Q76B58 766 aa30.84■■■□□ 2.53
ARF3-206ENST00000539611 KIAA1210Q9ULL0 1709 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms