RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 TET3O43151 1660 aa15.84■□□□□ 0.13
PTPN6-212ENST00000539029 CADPS2Q86UW7 1296 aa15.84■□□□□ 0.13
PTPN6-212ENST00000539029 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
PTPN6-212ENST00000539029 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.13
PTPN6-212ENST00000539029 LRRIQ1Q96JM4 1722 aa15.83■□□□□ 0.13
PTPN6-212ENST00000539029 ADAMTS2O95450 1211 aa15.83■□□□□ 0.12
PTPN6-212ENST00000539029 BRINP3Q76B58 766 aa15.83■□□□□ 0.12
PTPN6-212ENST00000539029 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
PTPN6-212ENST00000539029 NCOA3Q9Y6Q9 1424 aa15.83■□□□□ 0.12
PTPN6-212ENST00000539029 CFAP65Q6ZU64 1925 aaKnown RBP15.82■□□□□ 0.12
PTPN6-212ENST00000539029 TMEM2Q9UHN6 1383 aa15.82■□□□□ 0.12
PTPN6-212ENST00000539029 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
PTPN6-212ENST00000539029 UNC13BO14795 1591 aa15.81■□□□□ 0.12
PTPN6-212ENST00000539029 PNPLA6Q8IY17 1366 aa15.81■□□□□ 0.12
PTPN6-212ENST00000539029 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.81■□□□□ 0.12
PTPN6-212ENST00000539029 GPATCH8Q9UKJ3 1502 aaKnown RBP15.81■□□□□ 0.12
PTPN6-212ENST00000539029 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
PTPN6-212ENST00000539029 FNBP4Q8N3X1 1017 aaPredicted RBP15.8■□□□□ 0.12
PTPN6-212ENST00000539029 MROH1Q8NDA8 1641 aa15.79■□□□□ 0.12
PTPN6-212ENST00000539029 ATF3P18847 181 aa15.79■□□□□ 0.12
PTPN6-212ENST00000539029 C14orf37Q86TY3 774 aa15.79■□□□□ 0.12
PTPN6-212ENST00000539029 R3HDM1Q15032 1099 aaKnown RBP15.77■□□□□ 0.12
PTPN6-212ENST00000539029 CHD2O14647 1828 aaKnown RBP15.77■□□□□ 0.11
PTPN6-212ENST00000539029 CAMSAP2Q08AD1 1489 aa15.77■□□□□ 0.11
PTPN6-212ENST00000539029 C19orf44Q9H6X5 657 aa15.76■□□□□ 0.11
PTPN6-212ENST00000539029 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
PTPN6-212ENST00000539029 CEP162Q5TB80 1403 aa15.75■□□□□ 0.11
PTPN6-212ENST00000539029 BAG6P46379 1132 aa15.74■□□□□ 0.11
PTPN6-212ENST00000539029 SPHKAPQ2M3C7 1700 aa15.74■□□□□ 0.11
PTPN6-212ENST00000539029 SLC34A2O95436 690 aa15.73■□□□□ 0.11
PTPN6-212ENST00000539029 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
PTPN6-212ENST00000539029 BRWD3Q6RI45 1802 aa15.73■□□□□ 0.11
PTPN6-212ENST00000539029 GJD4Q96KN9 370 aaPredicted RBP15.72■□□□□ 0.11
PTPN6-212ENST00000539029 PIK3C2BO00750 1634 aa15.72■□□□□ 0.11
PTPN6-212ENST00000539029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTPN6-212ENST00000539029 PTCH1Q13635 1447 aa15.7■□□□□ 0.1
PTPN6-212ENST00000539029 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
PTPN6-212ENST00000539029 BCANQ96GW7 911 aa15.68■□□□□ 0.1
PTPN6-212ENST00000539029 EFCAB6Q5THR3 1501 aa15.68■□□□□ 0.1
PTPN6-212ENST00000539029 MBD5Q9P267 1494 aa15.67■□□□□ 0.1
PTPN6-212ENST00000539029 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
PTPN6-212ENST00000539029 CAMTA1Q9Y6Y1 1673 aa15.67■□□□□ 0.1
PTPN6-212ENST00000539029 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
PTPN6-212ENST00000539029 CASKIN1Q8WXD9 1431 aa15.65■□□□□ 0.1
PTPN6-212ENST00000539029 PPP1R1BQ9UD71 204 aaPredicted RBP15.64■□□□□ 0.09
PTPN6-212ENST00000539029 CHD4Q14839 1912 aa15.64■□□□□ 0.09
PTPN6-212ENST00000539029 RALGAPBQ86X10 1494 aa15.64■□□□□ 0.09
PTPN6-212ENST00000539029 CEP152O94986 1710 aa15.63■□□□□ 0.09
PTPN6-212ENST00000539029 DDX17Q92841 729 aaKnown RBP15.63■□□□□ 0.09
PTPN6-212ENST00000539029 GLI3P10071 1580 aa15.62■□□□□ 0.09
PTPN6-212ENST00000539029 DCCP43146 1447 aa15.62■□□□□ 0.09
PTPN6-212ENST00000539029 EN1Q05925 392 aaPredicted RBP15.62■□□□□ 0.09
PTPN6-212ENST00000539029 FYCO1Q9BQS8 1478 aa15.62■□□□□ 0.09
PTPN6-212ENST00000539029 ZNF644Q9H582 1327 aaPredicted RBP15.61■□□□□ 0.09
PTPN6-212ENST00000539029 GIGYF1O75420 1035 aaPredicted RBP15.6■□□□□ 0.09
PTPN6-212ENST00000539029 PCDH10Q9P2E7 1040 aa15.6■□□□□ 0.09
PTPN6-212ENST00000539029 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
PTPN6-212ENST00000539029 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.6■□□□□ 0.09
PTPN6-212ENST00000539029 MST1RQ04912 1400 aa15.6■□□□□ 0.09
PTPN6-212ENST00000539029 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
PTPN6-212ENST00000539029 SEPT12Q8IYM1 358 aa15.58■□□□□ 0.08
PTPN6-212ENST00000539029 MARF1Q9Y4F3 1742 aaKnown RBP15.57■□□□□ 0.08
PTPN6-212ENST00000539029 ARHGAP31Q2M1Z3 1444 aa15.57■□□□□ 0.08
PTPN6-212ENST00000539029 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
PTPN6-212ENST00000539029 KRT27Q7Z3Y8 459 aa15.56■□□□□ 0.08
PTPN6-212ENST00000539029 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
PTPN6-212ENST00000539029 TBX22Q9Y458 520 aa15.55■□□□□ 0.08
PTPN6-212ENST00000539029 UTRNP46939 3433 aa15.55■□□□□ 0.08
PTPN6-212ENST00000539029 RGPD1P0DJD0 1748 aa15.54■□□□□ 0.08
PTPN6-212ENST00000539029 IDI1Q13907 227 aa15.54■□□□□ 0.08
PTPN6-212ENST00000539029 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
PTPN6-212ENST00000539029 COL22A1Q8NFW1 1626 aaPredicted RBP15.54■□□□□ 0.08
PTPN6-212ENST00000539029 CCDC141Q6ZP82 1450 aa15.53■□□□□ 0.08
PTPN6-212ENST00000539029 DISP2A7MBM2 1401 aa15.52■□□□□ 0.08
PTPN6-212ENST00000539029 UNC5CLQ8IV45 518 aa15.52■□□□□ 0.08
PTPN6-212ENST00000539029 LAMC1P11047 1609 aa15.51■□□□□ 0.07
PTPN6-212ENST00000539029 EIF2AK4Q9P2K8 1649 aaKnown RBP15.51■□□□□ 0.07
PTPN6-212ENST00000539029 MYOM2P54296 1465 aa15.51■□□□□ 0.07
PTPN6-212ENST00000539029 SOS2Q07890 1332 aaPredicted RBP15.5■□□□□ 0.07
PTPN6-212ENST00000539029 CAPN15O75808 1086 aa15.5■□□□□ 0.07
PTPN6-212ENST00000539029 ADGRB3O60242 1522 aa15.49■□□□□ 0.07
PTPN6-212ENST00000539029 KCNQ2O43526 872 aa15.49■□□□□ 0.07
PTPN6-212ENST00000539029 EZH2Q15910 746 aaKnown RBP15.49■□□□□ 0.07
PTPN6-212ENST00000539029 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
PTPN6-212ENST00000539029 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
PTPN6-212ENST00000539029 RSPH4AQ5TD94 716 aa15.47■□□□□ 0.07
PTPN6-212ENST00000539029 MTUS2Q5JR59 1369 aa15.47■□□□□ 0.07
PTPN6-212ENST00000539029 SLIT2O94813 1529 aa15.46■□□□□ 0.07
PTPN6-212ENST00000539029 ZFYVE9O95405 1425 aa15.45■□□□□ 0.06
PTPN6-212ENST00000539029 TNS1Q9HBL0 1735 aaKnown RBP15.45■□□□□ 0.06
PTPN6-212ENST00000539029 TRPM2O94759 1503 aa15.44■□□□□ 0.06
PTPN6-212ENST00000539029 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
PTPN6-212ENST00000539029 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
PTPN6-212ENST00000539029 PRELPP51888 382 aa15.43■□□□□ 0.06
PTPN6-212ENST00000539029 CAMKK2Q96RR4 588 aa15.43■□□□□ 0.06
PTPN6-212ENST00000539029 AMOTL2Q9Y2J4 779 aa15.43■□□□□ 0.06
PTPN6-212ENST00000539029 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
PTPN6-212ENST00000539029 RPRD2Q5VT52 1461 aaKnown RBP15.41■□□□□ 0.06
PTPN6-212ENST00000539029 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
PTPN6-212ENST00000539029 TSPY4P0CV99 314 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms