RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SCAF11Q99590 1463 aaKnown RBP28.12■■■□□ 2.09
DDX55-205ENST00000538744 ARHGEF40Q8TER5 1519 aa28.12■■■□□ 2.09
DDX55-205ENST00000538744 TESK2Q96S53 571 aa28.11■■■□□ 2.09
DDX55-205ENST00000538744 PREX1Q8TCU6 1659 aa28.11■■■□□ 2.09
DDX55-205ENST00000538744 CHGAP10645 457 aaKnown RBP28.09■■■□□ 2.09
DDX55-205ENST00000538744 ADGRF5Q8IZF2 1346 aa28.07■■■□□ 2.08
DDX55-205ENST00000538744 RPGRIP1LQ68CZ1 1315 aa28.07■■■□□ 2.08
DDX55-205ENST00000538744 DISP3Q9P2K9 1392 aa28.05■■■□□ 2.08
DDX55-205ENST00000538744 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
DDX55-205ENST00000538744 EIF3AQ14152 1382 aaKnown RBP28.05■■■□□ 2.08
DDX55-205ENST00000538744 TMF1P82094 1093 aa28.04■■■□□ 2.08
DDX55-205ENST00000538744 SETBP1Q9Y6X0 1596 aa28.02■■■□□ 2.08
DDX55-205ENST00000538744 CLTCQ00610 1675 aaKnown RBP28.01■■■□□ 2.07
DDX55-205ENST00000538744 CFAP70Q5T0N1 1121 aa28.01■■■□□ 2.07
DDX55-205ENST00000538744 SLC52A1Q9NWF4 448 aa28■■■□□ 2.07
DDX55-205ENST00000538744 PIK3C2GO75747 1445 aa27.99■■■□□ 2.07
DDX55-205ENST00000538744 NEXMIFQ5QGS0 1516 aa27.98■■■□□ 2.07
DDX55-205ENST00000538744 ERVK-7P63135 1459 aa27.96■■■□□ 2.07
DDX55-205ENST00000538744 MRS2Q9HD23 443 aa27.95■■■□□ 2.07
DDX55-205ENST00000538744 MYO3AQ8NEV4 1616 aa27.95■■■□□ 2.06
DDX55-205ENST00000538744 CCDC184Q52MB2 194 aa27.95■■■□□ 2.06
DDX55-205ENST00000538744 MYO5BQ9ULV0 1848 aa27.95■■■□□ 2.06
DDX55-205ENST00000538744 KTN1Q86UP2 1357 aaKnown RBP27.94■■■□□ 2.06
DDX55-205ENST00000538744 TMEM131LA2VDJ0 1609 aa27.94■■■□□ 2.06
DDX55-205ENST00000538744 IDI1Q13907 227 aa27.94■■■□□ 2.06
DDX55-205ENST00000538744 CDCA8Q53HL2 280 aa27.91■■■□□ 2.06
DDX55-205ENST00000538744 C14orf93Q9H972 538 aaKnown RBP27.9■■■□□ 2.06
DDX55-205ENST00000538744 VGFO15240 615 aaPredicted RBP27.89■■■□□ 2.06
DDX55-205ENST00000538744 SLC24A1O60721 1099 aa27.89■■■□□ 2.06
DDX55-205ENST00000538744 KDM5AP29375 1690 aaKnown RBP27.88■■■□□ 2.05
DDX55-205ENST00000538744 ADGRB1O14514 1584 aa27.88■■■□□ 2.05
DDX55-205ENST00000538744 SPATA31D1Q6ZQQ2 1576 aa27.88■■■□□ 2.05
DDX55-205ENST00000538744 ZFYVE9O95405 1425 aa27.87■■■□□ 2.05
DDX55-205ENST00000538744 RALBP1Q15311 655 aa27.87■■■□□ 2.05
DDX55-205ENST00000538744 FBXO31Q5XUX0 539 aaPredicted RBP27.86■■■□□ 2.05
DDX55-205ENST00000538744 CNGB1Q14028 1251 aaPredicted RBP27.85■■■□□ 2.05
DDX55-205ENST00000538744 PER1O15534 1290 aaPredicted RBP27.84■■■□□ 2.05
DDX55-205ENST00000538744 HNRNPUQ00839 825 aaKnown RBP eCLIP27.84■■■□□ 2.05
DDX55-205ENST00000538744 MLECQ14165 292 aa27.84■■■□□ 2.05
DDX55-205ENST00000538744 MYOM1P52179 1685 aa27.83■■■□□ 2.05
DDX55-205ENST00000538744 SBNO2Q9Y2G9 1366 aa27.83■■■□□ 2.05
DDX55-205ENST00000538744 PANK3Q9H999 370 aa27.81■■■□□ 2.04
DDX55-205ENST00000538744 MYBBP1AQ9BQG0 1328 aaKnown RBP27.81■■■□□ 2.04
DDX55-205ENST00000538744 FAM9BQ8IZU0 186 aa27.81■■■□□ 2.04
DDX55-205ENST00000538744 QRICH2Q9H0J4 1663 aa27.8■■■□□ 2.04
DDX55-205ENST00000538744 PARD3Q8TEW0 1356 aa27.79■■■□□ 2.04
DDX55-205ENST00000538744 CENPJQ9HC77 1338 aaPredicted RBP27.77■■■□□ 2.04
DDX55-205ENST00000538744 ESF1Q9H501 851 aaKnown RBP27.77■■■□□ 2.04
DDX55-205ENST00000538744 BRD4O60885 1362 aaPredicted RBP27.76■■■□□ 2.04
DDX55-205ENST00000538744 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
DDX55-205ENST00000538744 ARHGEF28Q8N1W1 1705 aaKnown RBP27.75■■■□□ 2.03
DDX55-205ENST00000538744 TMEM132EQ6IEE7 984 aa27.73■■■□□ 2.03
DDX55-205ENST00000538744 TRAK1Q9UPV9 953 aa27.73■■■□□ 2.03
DDX55-205ENST00000538744 TMC1Q8TDI8 760 aa27.72■■■□□ 2.03
DDX55-205ENST00000538744 STAG3Q9UJ98 1225 aa27.72■■■□□ 2.03
DDX55-205ENST00000538744 ZMYM3Q14202 1370 aa27.71■■■□□ 2.03
DDX55-205ENST00000538744 A2ML1A8K2U0 1454 aa27.7■■■□□ 2.03
DDX55-205ENST00000538744 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
DDX55-205ENST00000538744 NLRP13Q86W25 1043 aa27.68■■■□□ 2.02
DDX55-205ENST00000538744 KNSTRNQ9Y448 316 aa27.67■■■□□ 2.02
DDX55-205ENST00000538744 CC2D1BQ5T0F9 858 aaKnown RBP27.66■■■□□ 2.02
DDX55-205ENST00000538744 PNISRQ8TF01 805 aaKnown RBP27.66■■■□□ 2.02
DDX55-205ENST00000538744 ZBED9Q6R2W3 1325 aa27.64■■■□□ 2.02
DDX55-205ENST00000538744 ALKQ9UM73 1620 aa27.63■■■□□ 2.01
DDX55-205ENST00000538744 RIMS2Q9UQ26 1411 aa27.62■■■□□ 2.01
DDX55-205ENST00000538744 TRHP20396 242 aaPredicted RBP27.61■■■□□ 2.01
DDX55-205ENST00000538744 LRPPRCP42704 1394 aaKnown RBP27.61■■■□□ 2.01
DDX55-205ENST00000538744 NPC1L1Q9UHC9 1359 aa27.6■■■□□ 2.01
DDX55-205ENST00000538744 TNRQ92752 1358 aa27.59■■■□□ 2.01
DDX55-205ENST00000538744 AMER1Q5JTC6 1135 aaPredicted RBP27.58■■■□□ 2.01
DDX55-205ENST00000538744 YTHDC2Q9H6S0 1430 aaKnown RBP27.56■■■□□ 2
DDX55-205ENST00000538744 SETD1AO15047 1707 aaKnown RBP27.56■■■□□ 2
DDX55-205ENST00000538744 TULP4Q9NRJ4 1543 aa27.55■■■□□ 2
DDX55-205ENST00000538744 PTPRMP28827 1452 aa27.55■■■□□ 2
DDX55-205ENST00000538744 PUS7Q96PZ0 661 aaKnown RBP27.55■■■□□ 2
DDX55-205ENST00000538744 EVC2Q86UK5 1308 aa27.54■■■□□ 2
DDX55-205ENST00000538744 UBR1Q8IWV7 1749 aa27.53■■■□□ 2
DDX55-205ENST00000538744 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.53■■■□□ 2
DDX55-205ENST00000538744 FER1L4A9Z1Z3 1794 aa27.52■■■□□ 2
DDX55-205ENST00000538744 STK26Q9P289 416 aa27.52■■■□□ 2
DDX55-205ENST00000538744 SUPT16HQ9Y5B9 1047 aaKnown RBP27.52■■■□□ 2
DDX55-205ENST00000538744 SENP3Q9H4L4 574 aaPredicted RBP27.51■■□□□ 1.99
DDX55-205ENST00000538744 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
DDX55-205ENST00000538744 C3P01024 1663 aa27.49■■□□□ 1.99
DDX55-205ENST00000538744 DLC1Q96QB1 1528 aa27.47■■□□□ 1.99
DDX55-205ENST00000538744 NLRP1Q9C000 1473 aa27.47■■□□□ 1.99
DDX55-205ENST00000538744 NEFLP07196 543 aa27.47■■□□□ 1.99
DDX55-205ENST00000538744 HDGFP51858 240 aaKnown RBP27.47■■□□□ 1.99
DDX55-205ENST00000538744 USP32Q8NFA0 1604 aa27.46■■□□□ 1.99
DDX55-205ENST00000538744 PPP2R1AP30153 589 aa27.46■■□□□ 1.99
DDX55-205ENST00000538744 CARD14Q9BXL6 1004 aa27.46■■□□□ 1.99
DDX55-205ENST00000538744 INSRP06213 1382 aa27.46■■□□□ 1.99
DDX55-205ENST00000538744 PRAM1Q96QH2 718 aa27.43■■□□□ 1.98
DDX55-205ENST00000538744 POGKQ9P215 609 aa27.43■■□□□ 1.98
DDX55-205ENST00000538744 SAFB2Q14151 953 aaKnown RBP eCLIP27.42■■□□□ 1.98
DDX55-205ENST00000538744 TMEM2Q9UHN6 1383 aa27.42■■□□□ 1.98
DDX55-205ENST00000538744 SLC12A5Q9H2X9 1139 aa27.41■■□□□ 1.98
DDX55-205ENST00000538744 NSD3Q9BZ95 1437 aa27.41■■□□□ 1.98
DDX55-205ENST00000538744 NINLQ9Y2I6 1382 aa27.4■■□□□ 1.98
DDX55-205ENST00000538744 FKBP8Q14318 412 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms