RNA–Protein interactions for RNA: ENST00000538503.5

KDM2B-209, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 6,676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-209ENST00000538503 CREBRFQ8IUR6 639 aa16.61■□□□□ 0.25
KDM2B-209ENST00000538503 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
KDM2B-209ENST00000538503 CABP4P57796 275 aa16.61■□□□□ 0.25
KDM2B-209ENST00000538503 ARHGAP5Q13017 1502 aa16.61■□□□□ 0.25
KDM2B-209ENST00000538503 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
KDM2B-209ENST00000538503 LMTK3Q96Q04 1460 aa16.6■□□□□ 0.25
KDM2B-209ENST00000538503 HMMRO75330 724 aa16.6■□□□□ 0.25
KDM2B-209ENST00000538503 MPHOSPH10O00566 681 aaKnown RBP16.6■□□□□ 0.25
KDM2B-209ENST00000538503 NOC3LQ8WTT2 800 aaKnown RBP16.6■□□□□ 0.25
KDM2B-209ENST00000538503 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
KDM2B-209ENST00000538503 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
KDM2B-209ENST00000538503 NRDCO43847 1150 aa16.59■□□□□ 0.25
KDM2B-209ENST00000538503 TMOD2Q9NZR1 351 aa16.59■□□□□ 0.25
KDM2B-209ENST00000538503 RGS3P49796 1198 aa16.59■□□□□ 0.25
KDM2B-209ENST00000538503 RIC3Q7Z5B4 369 aa16.59■□□□□ 0.25
KDM2B-209ENST00000538503 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
KDM2B-209ENST00000538503 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
KDM2B-209ENST00000538503 MTMR7Q9Y216 660 aa16.58■□□□□ 0.24
KDM2B-209ENST00000538503 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
KDM2B-209ENST00000538503 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
KDM2B-209ENST00000538503 FHOD3Q2V2M9 1422 aa16.57■□□□□ 0.24
KDM2B-209ENST00000538503 AK7Q96M32 723 aa16.57■□□□□ 0.24
KDM2B-209ENST00000538503 KTN1Q86UP2 1357 aaKnown RBP16.57■□□□□ 0.24
KDM2B-209ENST00000538503 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
KDM2B-209ENST00000538503 SLC26A8Q96RN1 970 aa16.56■□□□□ 0.24
KDM2B-209ENST00000538503 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
KDM2B-209ENST00000538503 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
KDM2B-209ENST00000538503 RAPGEF3O95398 923 aa16.55■□□□□ 0.24
KDM2B-209ENST00000538503 CRBNQ96SW2 442 aa16.55■□□□□ 0.24
KDM2B-209ENST00000538503 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
KDM2B-209ENST00000538503 SPG7Q9UQ90 795 aa16.55■□□□□ 0.24
KDM2B-209ENST00000538503 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
KDM2B-209ENST00000538503 WDR78Q5VTH9 848 aa16.54■□□□□ 0.24
KDM2B-209ENST00000538503 PHF14O94880 888 aa16.53■□□□□ 0.24
KDM2B-209ENST00000538503 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
KDM2B-209ENST00000538503 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
KDM2B-209ENST00000538503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■■■■ 128.1
KDM2B-209ENST00000538503 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
KDM2B-209ENST00000538503 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
KDM2B-209ENST00000538503 RRP7AQ9Y3A4 280 aaKnown RBP16.52■□□□□ 0.24
KDM2B-209ENST00000538503 ERICH2A1L162 156 aa16.52■□□□□ 0.23
KDM2B-209ENST00000538503 CA8P35219 290 aa16.52■□□□□ 0.23
KDM2B-209ENST00000538503 GPR162Q16538 588 aa16.52■□□□□ 0.23
KDM2B-209ENST00000538503 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
KDM2B-209ENST00000538503 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
KDM2B-209ENST00000538503 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
KDM2B-209ENST00000538503 BCL2L13Q9BXK5 485 aa16.5■□□□□ 0.23
KDM2B-209ENST00000538503 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
KDM2B-209ENST00000538503 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.232e-6■■□□□ 11.5
KDM2B-209ENST00000538503 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
KDM2B-209ENST00000538503 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
KDM2B-209ENST00000538503 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
KDM2B-209ENST00000538503 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
KDM2B-209ENST00000538503 RFX1P22670 979 aa16.48■□□□□ 0.23
KDM2B-209ENST00000538503 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
KDM2B-209ENST00000538503 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
KDM2B-209ENST00000538503 PPP4R2Q9NY27 417 aa16.47■□□□□ 0.23
KDM2B-209ENST00000538503 MSH6P52701 1360 aa16.47■□□□□ 0.23
KDM2B-209ENST00000538503 LRPPRCP42704 1394 aaKnown RBP16.47■□□□□ 0.23
KDM2B-209ENST00000538503 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
KDM2B-209ENST00000538503 IL27Q8NEV9 243 aa16.47■□□□□ 0.23
KDM2B-209ENST00000538503 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
KDM2B-209ENST00000538503 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
KDM2B-209ENST00000538503 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
KDM2B-209ENST00000538503 VTI1AQ96AJ9 217 aa16.46■□□□□ 0.23
KDM2B-209ENST00000538503 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
KDM2B-209ENST00000538503 GRIN2BQ13224 1484 aa16.46■□□□□ 0.23
KDM2B-209ENST00000538503 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.22
KDM2B-209ENST00000538503 CNNM1Q9NRU3 951 aa16.45■□□□□ 0.22
KDM2B-209ENST00000538503 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
KDM2B-209ENST00000538503 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
KDM2B-209ENST00000538503 LMOD1P29536 600 aaPredicted RBP16.45■□□□□ 0.22
KDM2B-209ENST00000538503 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
KDM2B-209ENST00000538503 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
KDM2B-209ENST00000538503 ELL2O00472 640 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-209ENST00000538503 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
KDM2B-209ENST00000538503 CEBPAP49715 358 aaPredicted RBP16.44■□□□□ 0.22
KDM2B-209ENST00000538503 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
KDM2B-209ENST00000538503 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
KDM2B-209ENST00000538503 DRC7Q8IY82 874 aa16.43■□□□□ 0.22
KDM2B-209ENST00000538503 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
KDM2B-209ENST00000538503 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
KDM2B-209ENST00000538503 ZNF710Q8N1W2 664 aa16.43■□□□□ 0.22
KDM2B-209ENST00000538503 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
KDM2B-209ENST00000538503 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
KDM2B-209ENST00000538503 EXOC5O00471 708 aa16.42■□□□□ 0.22
KDM2B-209ENST00000538503 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
KDM2B-209ENST00000538503 SLC3A2P08195 630 aaKnown RBP16.42■□□□□ 0.22
KDM2B-209ENST00000538503 NF2P35240 595 aa16.42■□□□□ 0.22
KDM2B-209ENST00000538503 HSPA2P54652 639 aa16.42■□□□□ 0.22
KDM2B-209ENST00000538503 TRDNQ13061 729 aa16.41■□□□□ 0.22
KDM2B-209ENST00000538503 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
KDM2B-209ENST00000538503 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
KDM2B-209ENST00000538503 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
KDM2B-209ENST00000538503 TMOD3Q9NYL9 352 aa16.41■□□□□ 0.22
KDM2B-209ENST00000538503 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
KDM2B-209ENST00000538503 BAG6P46379 1132 aa16.39■□□□□ 0.22
KDM2B-209ENST00000538503 RFC4P35249 363 aa16.39■□□□□ 0.21
KDM2B-209ENST00000538503 TRIM29Q14134 588 aa16.39■□□□□ 0.21
KDM2B-209ENST00000538503 B4GALNT3Q6L9W6 998 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms