RNA–Protein interactions for RNA: ENST00000538260.5

ARMC8-223, Transcript of armadillo repeat containing 8, human

TSL 2 BASIC

Gene ARMC8, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARMC8-223	ENST00000538260	UACA	Q9BZF9	1416 aa		13.18	□□□□□ -0.3
ARMC8-223	ENST00000538260	FRAT2	O75474	233 aa	Predicted RBP	13.17	□□□□□ -0.3
ARMC8-223	ENST00000538260	FAM43A	Q8N2R8	423 aa		13.17	□□□□□ -0.3
ARMC8-223	ENST00000538260	JPH4	Q96JJ6	628 aa		13.17	□□□□□ -0.3
ARMC8-223	ENST00000538260	NUTM2F	A1L443	756 aa		13.17	□□□□□ -0.3
ARMC8-223	ENST00000538260	MARCH6	O60337	910 aa		13.17	□□□□□ -0.3
ARMC8-223	ENST00000538260	TEF	Q10587	303 aa		13.17	□□□□□ -0.3
ARMC8-223	ENST00000538260	AKAP17A	Q02040	695 aa	Known RBP	13.16	□□□□□ -0.3
ARMC8-223	ENST00000538260	MCTP1	Q6DN14	999 aa		13.16	□□□□□ -0.3
ARMC8-223	ENST00000538260	GTF2E1	P29083	439 aa	Predicted RBP	13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	NFKBIB	Q15653	356 aa		13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	DIAPH1	O60610	1272 aa	Known RBP	13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	FAM13B	Q9NYF5	915 aa		13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	NEXN	Q0ZGT2	675 aa		13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	SYNE3	Q6ZMZ3	975 aa		13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	ANO2	Q9NQ90	1003 aa		13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	C22orf23	Q9BZE7	217 aa		13.15	□□□□□ -0.3
ARMC8-223	ENST00000538260	IPO7	O95373	1038 aa	Known RBP	13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	RIPK4	P57078	832 aa		13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	ZNF592	Q92610	1267 aa		13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	CCDC70	Q6NSX1	233 aa		13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	SMARCA4	P51532	1647 aa		13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	RNF20	Q5VTR2	975 aa		13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	RUNDC1	Q96C34	613 aa		13.14	□□□□□ -0.31
ARMC8-223	ENST00000538260	INTS3	Q68E01	1043 aa	Known RBP	13.13	□□□□□ -0.31
ARMC8-223	ENST00000538260	BICD2	Q8TD16	824 aa		13.13	□□□□□ -0.31
ARMC8-223	ENST00000538260	CCDC7	Q96M83	1385 aa		13.13	□□□□□ -0.31
ARMC8-223	ENST00000538260	LNPK	Q9C0E8	428 aa		13.13	□□□□□ -0.31
ARMC8-223	ENST00000538260	MRE11	P49959	708 aa		13.13	□□□□□ -0.31
ARMC8-223	ENST00000538260	CPLX1	O14810	134 aa		13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	ROCK1	Q13464	1354 aa		13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	PDE4C	Q08493	712 aa		13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	STAC3	Q96MF2	364 aa		13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	KIF7	Q2M1P5	1343 aa		13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	IFIT2	P09913	472 aa	Known RBP	13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	C1orf141	Q5JVX7	400 aa		13.12	□□□□□ -0.31
ARMC8-223	ENST00000538260	SMC3	Q9UQE7	1217 aa		13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	TPM2	P07951	284 aa		13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	TRIM29	Q14134	588 aa		13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	HOMER1	Q86YM7	354 aa		13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	SET	Q01105	290 aa	Predicted RBP	13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	CADPS	Q9ULU8	1353 aa		13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	ANKRD20A12P	Q8NF67	263 aa		13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	CCDC9	Q9Y3X0	531 aa	Known RBP	13.11	□□□□□ -0.31
ARMC8-223	ENST00000538260	VPS37C	A5D8V6	355 aa	Predicted RBP	13.1	□□□□□ -0.31
ARMC8-223	ENST00000538260	GNAI1	P63096	354 aa		13.1	□□□□□ -0.31
ARMC8-223	ENST00000538260	HSP90AB4P	Q58FF6	505 aa		13.1	□□□□□ -0.31
ARMC8-223	ENST00000538260	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.09	□□□□□ -0.31
ARMC8-223	ENST00000538260	FKBP5	Q13451	457 aa	Predicted RBP	13.09	□□□□□ -0.31
ARMC8-223	ENST00000538260	EIF2S2	P20042	333 aa	Known RBP	13.09	□□□□□ -0.31
ARMC8-223	ENST00000538260	TEX35	Q5T0J7	233 aa		13.09	□□□□□ -0.31
ARMC8-223	ENST00000538260		G3V3G9	751 aa		13.09	□□□□□ -0.31
ARMC8-223	ENST00000538260	DCAF8	Q5TAQ9	597 aa		13.09	□□□□□ -0.31
ARMC8-223	ENST00000538260	SASS6	Q6UVJ0	657 aa		13.09	□□□□□ -0.31
ARMC8-223	ENST00000538260	HOOK1	Q9UJC3	728 aa	Known RBP	13.08	□□□□□ -0.31
ARMC8-223	ENST00000538260	TRDN	Q13061	729 aa		13.08	□□□□□ -0.32
ARMC8-223	ENST00000538260	DDX58	O95786	925 aa	Known RBP	13.08	□□□□□ -0.32
ARMC8-223	ENST00000538260	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
ARMC8-223	ENST00000538260	CCDC73	Q6ZRK6	1079 aa		13.07	□□□□□ -0.32
ARMC8-223	ENST00000538260	CCDC47	Q96A33	483 aa	Known RBP	13.07	□□□□□ -0.32
ARMC8-223	ENST00000538260	VPS53	Q5VIR6	699 aa		13.07	□□□□□ -0.32
ARMC8-223	ENST00000538260	PANK1	Q8TE04	598 aa		13.07	□□□□□ -0.32
ARMC8-223	ENST00000538260	NASP	P49321	788 aa	Predicted RBP	13.06	□□□□□ -0.32
ARMC8-223	ENST00000538260	MAP7D2	Q96T17	732 aa		13.06	□□□□□ -0.32
ARMC8-223	ENST00000538260	BRD4	O60885	1362 aa	Predicted RBP	13.06	□□□□□ -0.32
ARMC8-223	ENST00000538260	ERC2	O15083	957 aa		13.06	□□□□□ -0.32
ARMC8-223	ENST00000538260	CDC45	O75419	566 aa		13.06	□□□□□ -0.32
ARMC8-223	ENST00000538260	MTERF4	Q7Z6M4	381 aa	Known RBP	13.06	□□□□□ -0.32
ARMC8-223	ENST00000538260	CNTLN	Q9NXG0	1405 aa		13.06	□□□□□ -0.32
ARMC8-223	ENST00000538260	TTC5	Q8N0Z6	440 aa		13.05	□□□□□ -0.32
ARMC8-223	ENST00000538260	TRAK2	O60296	914 aa		13.05	□□□□□ -0.32
ARMC8-223	ENST00000538260	IFT57	Q9NWB7	429 aa		13.05	□□□□□ -0.32
ARMC8-223	ENST00000538260	APP	P05067	770 aa		13.05	□□□□□ -0.32
ARMC8-223	ENST00000538260	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.05	□□□□□ -0.32
ARMC8-223	ENST00000538260	MBD3	O95983	291 aa		13.04	□□□□□ -0.32
ARMC8-223	ENST00000538260	MYOM3	Q5VTT5	1437 aa		13.04	□□□□□ -0.32
ARMC8-223	ENST00000538260	MNS1	Q8NEH6	495 aa		13.04	□□□□□ -0.32
ARMC8-223	ENST00000538260	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.04	□□□□□ -0.32
ARMC8-223	ENST00000538260	ADAMTS8	Q9UP79	889 aa		13.04	□□□□□ -0.32
ARMC8-223	ENST00000538260	NECTIN2	Q92692	538 aa		13.03	□□□□□ -0.32
ARMC8-223	ENST00000538260	CCDC39	Q9UFE4	941 aa		13.03	□□□□□ -0.32
ARMC8-223	ENST00000538260	WASHC2A	Q641Q2	1341 aa		13.02	□□□□□ -0.32
ARMC8-223	ENST00000538260	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
ARMC8-223	ENST00000538260	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.02	□□□□□ -0.33
ARMC8-223	ENST00000538260	MIA2	Q96PC5	1412 aa		13.02	□□□□□ -0.33
ARMC8-223	ENST00000538260	SAFB	Q15424	915 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
ARMC8-223	ENST00000538260	TSPYL4	Q9UJ04	414 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	RNF214	Q8ND24	703 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	SDF4	Q9BRK5	362 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	MCM2	P49736	904 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	PDE3A	Q14432	1141 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	AMOTL1	Q8IY63	956 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	TCP11L2	Q8N4U5	519 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	ACBD3	Q9H3P7	528 aa		13.01	□□□□□ -0.33
ARMC8-223	ENST00000538260	PTPRG	P23470	1445 aa		13	□□□□□ -0.33
ARMC8-223	ENST00000538260	CDCA7L	Q96GN5	454 aa		13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms