RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TRPM2O94759 1503 aa12.62□□□□□ -0.39
SPARC-208ENST00000538026 RAB3GAP2Q9H2M9 1393 aa12.62□□□□□ -0.39
SPARC-208ENST00000538026 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
SPARC-208ENST00000538026 SLC26A8Q96RN1 970 aa12.62□□□□□ -0.39
SPARC-208ENST00000538026 MPHOSPH9Q99550 1183 aa12.62□□□□□ -0.39
SPARC-208ENST00000538026 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
SPARC-208ENST00000538026 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
SPARC-208ENST00000538026 ALKQ9UM73 1620 aa12.6□□□□□ -0.39
SPARC-208ENST00000538026 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
SPARC-208ENST00000538026 PLEKHG1Q9ULL1 1385 aa12.59□□□□□ -0.39
SPARC-208ENST00000538026 CPS1P31327 1500 aa12.59□□□□□ -0.39
SPARC-208ENST00000538026 ADAMTS13Q76LX8 1427 aa12.59□□□□□ -0.39
SPARC-208ENST00000538026 NRXN3Q9Y4C0 1643 aa12.57□□□□□ -0.4
SPARC-208ENST00000538026 KIF1BO60333 1816 aa12.57□□□□□ -0.4
SPARC-208ENST00000538026 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
SPARC-208ENST00000538026 CHD2O14647 1828 aaKnown RBP12.56□□□□□ -0.4
SPARC-208ENST00000538026 KCNA6P17658 529 aa12.55□□□□□ -0.4
SPARC-208ENST00000538026 RBM33Q96EV2 1170 aaKnown RBP12.55□□□□□ -0.4
SPARC-208ENST00000538026 TBX22Q9Y458 520 aa12.55□□□□□ -0.4
SPARC-208ENST00000538026 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
SPARC-208ENST00000538026 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
SPARC-208ENST00000538026 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
SPARC-208ENST00000538026 NWD1Q149M9 1564 aa12.53□□□□□ -0.4
SPARC-208ENST00000538026 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
SPARC-208ENST00000538026 HRCP23327 699 aa12.53□□□□□ -0.4
SPARC-208ENST00000538026 PPP1R15AO75807 674 aaPredicted RBP12.52□□□□□ -0.41
SPARC-208ENST00000538026 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
SPARC-208ENST00000538026 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.41
SPARC-208ENST00000538026 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.41
SPARC-208ENST00000538026 BCANQ96GW7 911 aa12.51□□□□□ -0.41
SPARC-208ENST00000538026 METP08581 1390 aa12.51□□□□□ -0.41
SPARC-208ENST00000538026 PPLO60437 1756 aa12.51□□□□□ -0.41
SPARC-208ENST00000538026 TMEM94Q12767 1356 aa12.5□□□□□ -0.41
SPARC-208ENST00000538026 ANKRD30BQ9BXX2 1392 aa12.5□□□□□ -0.41
SPARC-208ENST00000538026 SETD1AO15047 1707 aaKnown RBP12.5□□□□□ -0.41
SPARC-208ENST00000538026 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
SPARC-208ENST00000538026 PROSER2Q86WR7 435 aaPredicted RBP12.48□□□□□ -0.41
SPARC-208ENST00000538026 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
SPARC-208ENST00000538026 DIP2AQ14689 1571 aa12.47□□□□□ -0.41
SPARC-208ENST00000538026 CCDC144AA2RUR9 1427 aa12.47□□□□□ -0.41
SPARC-208ENST00000538026 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
SPARC-208ENST00000538026 ADGRF5Q8IZF2 1346 aa12.47□□□□□ -0.41
SPARC-208ENST00000538026 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
SPARC-208ENST00000538026 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
SPARC-208ENST00000538026 PIK3R4Q99570 1358 aa12.46□□□□□ -0.41
SPARC-208ENST00000538026 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.41
SPARC-208ENST00000538026 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
SPARC-208ENST00000538026 PIP4K2BP78356 416 aa12.46□□□□□ -0.41
SPARC-208ENST00000538026 TOM1O60784 492 aa12.45□□□□□ -0.42
SPARC-208ENST00000538026 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
SPARC-208ENST00000538026 HSPA1LP34931 641 aa12.44□□□□□ -0.42
SPARC-208ENST00000538026 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
SPARC-208ENST00000538026 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.41□□□□□ -0.42
SPARC-208ENST00000538026 NRXN1Q9ULB1 1477 aa12.4□□□□□ -0.42
SPARC-208ENST00000538026 PIK3C2GO75747 1445 aa12.4□□□□□ -0.42
SPARC-208ENST00000538026 DHX57Q6P158 1386 aaKnown RBP12.4□□□□□ -0.42
SPARC-208ENST00000538026 ROBO2Q9HCK4 1378 aa12.4□□□□□ -0.42
SPARC-208ENST00000538026 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
SPARC-208ENST00000538026 NCOA3Q9Y6Q9 1424 aa12.39□□□□□ -0.43
SPARC-208ENST00000538026 TMEM132EQ6IEE7 984 aa12.38□□□□□ -0.43
SPARC-208ENST00000538026 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
SPARC-208ENST00000538026 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
SPARC-208ENST00000538026 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
SPARC-208ENST00000538026 C14orf93Q9H972 538 aaKnown RBP12.37□□□□□ -0.43
SPARC-208ENST00000538026 SLAIN2Q9P270 581 aa12.37□□□□□ -0.43
SPARC-208ENST00000538026 ROBO1Q9Y6N7 1651 aa12.36□□□□□ -0.43
SPARC-208ENST00000538026 MYOM2P54296 1465 aa12.36□□□□□ -0.43
SPARC-208ENST00000538026 MSH6P52701 1360 aa12.36□□□□□ -0.43
SPARC-208ENST00000538026 CFAP70Q5T0N1 1121 aa12.36□□□□□ -0.43
SPARC-208ENST00000538026 NALCNQ8IZF0 1738 aa12.36□□□□□ -0.43
SPARC-208ENST00000538026 PTCH1Q13635 1447 aa12.35□□□□□ -0.43
SPARC-208ENST00000538026 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
SPARC-208ENST00000538026 LRPPRCP42704 1394 aaKnown RBP12.33□□□□□ -0.44
SPARC-208ENST00000538026 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
SPARC-208ENST00000538026 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
SPARC-208ENST00000538026 SIN3AQ96ST3 1273 aa12.33□□□□□ -0.44
SPARC-208ENST00000538026 STK26Q9P289 416 aa12.33□□□□□ -0.44
SPARC-208ENST00000538026 TECPR2O15040 1411 aa12.33□□□□□ -0.44
SPARC-208ENST00000538026 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
SPARC-208ENST00000538026 ABCC11Q96J66 1382 aa12.32□□□□□ -0.44
SPARC-208ENST00000538026 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
SPARC-208ENST00000538026 MST1RQ04912 1400 aa12.32□□□□□ -0.44
SPARC-208ENST00000538026 C14orf37Q86TY3 774 aa12.32□□□□□ -0.44
SPARC-208ENST00000538026 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
SPARC-208ENST00000538026 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
SPARC-208ENST00000538026 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
SPARC-208ENST00000538026 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
SPARC-208ENST00000538026 KNDC1Q76NI1 1749 aa12.31□□□□□ -0.44
SPARC-208ENST00000538026 DCCP43146 1447 aa12.3□□□□□ -0.44
SPARC-208ENST00000538026 ATF3P18847 181 aa12.3□□□□□ -0.44
SPARC-208ENST00000538026 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
SPARC-208ENST00000538026 DDX17Q92841 729 aaKnown RBP12.28□□□□□ -0.44
SPARC-208ENST00000538026 COL16A1Q07092 1604 aaPredicted RBP12.27□□□□□ -0.44
SPARC-208ENST00000538026 L3MBTL2Q969R5 705 aa12.27□□□□□ -0.45
SPARC-208ENST00000538026 SIRT1Q96EB6 747 aa12.27□□□□□ -0.45
SPARC-208ENST00000538026 C1orf167Q5SNV9 1468 aa12.27□□□□□ -0.45
SPARC-208ENST00000538026 LAMC1P11047 1609 aa12.26□□□□□ -0.45
SPARC-208ENST00000538026 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
SPARC-208ENST00000538026 NBPF1Q3BBV0 1214 aa12.26□□□□□ -0.45
SPARC-208ENST00000538026 ORAI2Q96SN7 254 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms