RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 LMTK2Q8IWU2 1503 aa24.98■■□□□ 1.59
HTATSF1-204ENST00000535601 TMF1P82094 1093 aa24.98■■□□□ 1.59
HTATSF1-204ENST00000535601 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
HTATSF1-204ENST00000535601 CAMSAP1Q5T5Y3 1602 aa24.97■■□□□ 1.59
HTATSF1-204ENST00000535601 FKBP8Q14318 412 aa24.95■■□□□ 1.58
HTATSF1-204ENST00000535601 LAMC1P11047 1609 aa24.94■■□□□ 1.58
HTATSF1-204ENST00000535601 IDI1Q13907 227 aa24.93■■□□□ 1.58
HTATSF1-204ENST00000535601 IQGAP1P46940 1657 aa24.93■■□□□ 1.58
HTATSF1-204ENST00000535601 TRAK1Q9UPV9 953 aa24.92■■□□□ 1.58
HTATSF1-204ENST00000535601 TMC1Q8TDI8 760 aa24.91■■□□□ 1.58
HTATSF1-204ENST00000535601 IRX6P78412 446 aaPredicted RBP24.91■■□□□ 1.58
HTATSF1-204ENST00000535601 SCAF11Q99590 1463 aaKnown RBP24.9■■□□□ 1.58
HTATSF1-204ENST00000535601 PER1O15534 1290 aaPredicted RBP24.9■■□□□ 1.58
HTATSF1-204ENST00000535601 SYNMO15061 1565 aa24.89■■□□□ 1.58
HTATSF1-204ENST00000535601 ADGRB3O60242 1522 aa24.89■■□□□ 1.58
HTATSF1-204ENST00000535601 KIF13AQ9H1H9 1805 aa24.89■■□□□ 1.58
HTATSF1-204ENST00000535601 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
HTATSF1-204ENST00000535601 MYO5BQ9ULV0 1848 aa24.85■■□□□ 1.57
HTATSF1-204ENST00000535601 SALL2Q9Y467 1007 aaPredicted RBP24.84■■□□□ 1.57
HTATSF1-204ENST00000535601 SAFB2Q14151 953 aaKnown RBP eCLIP24.84■■□□□ 1.57
HTATSF1-204ENST00000535601 MYOM2P54296 1465 aa24.83■■□□□ 1.57
HTATSF1-204ENST00000535601 PPLO60437 1756 aa24.82■■□□□ 1.56
HTATSF1-204ENST00000535601 KTN1Q86UP2 1357 aaKnown RBP24.82■■□□□ 1.56
HTATSF1-204ENST00000535601 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
HTATSF1-204ENST00000535601 PNISRQ8TF01 805 aaKnown RBP24.81■■□□□ 1.56
HTATSF1-204ENST00000535601 STAC3Q96MF2 364 aa24.79■■□□□ 1.56
HTATSF1-204ENST00000535601 ZMYM4Q5VZL5 1548 aa24.79■■□□□ 1.56
HTATSF1-204ENST00000535601 STK26Q9P289 416 aa24.79■■□□□ 1.56
HTATSF1-204ENST00000535601 RALBP1Q15311 655 aa24.77■■□□□ 1.56
HTATSF1-204ENST00000535601 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
HTATSF1-204ENST00000535601 EIF3AQ14152 1382 aaKnown RBP24.76■■□□□ 1.55
HTATSF1-204ENST00000535601 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
HTATSF1-204ENST00000535601 C14orf93Q9H972 538 aaKnown RBP24.76■■□□□ 1.55
HTATSF1-204ENST00000535601 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
HTATSF1-204ENST00000535601 PARD3Q8TEW0 1356 aa24.75■■□□□ 1.55
HTATSF1-204ENST00000535601 KIAA1210Q9ULL0 1709 aa24.75■■□□□ 1.55
HTATSF1-204ENST00000535601 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
HTATSF1-204ENST00000535601 STAG3Q9UJ98 1225 aa24.75■■□□□ 1.55
HTATSF1-204ENST00000535601 NEURL4Q96JN8 1562 aa24.74■■□□□ 1.55
HTATSF1-204ENST00000535601 PIK3C2BO00750 1634 aa24.74■■□□□ 1.55
HTATSF1-204ENST00000535601 KNSTRNQ9Y448 316 aa24.74■■□□□ 1.55
HTATSF1-204ENST00000535601 CLTCQ00610 1675 aaKnown RBP24.73■■□□□ 1.55
HTATSF1-204ENST00000535601 NEFLP07196 543 aa24.73■■□□□ 1.55
HTATSF1-204ENST00000535601 ZBED9Q6R2W3 1325 aa24.73■■□□□ 1.55
HTATSF1-204ENST00000535601 ERVK-7P63135 1459 aa24.72■■□□□ 1.55
HTATSF1-204ENST00000535601 CENPJQ9HC77 1338 aaPredicted RBP24.72■■□□□ 1.55
HTATSF1-204ENST00000535601 NEXMIFQ5QGS0 1516 aa24.71■■□□□ 1.55
HTATSF1-204ENST00000535601 ZC3H13Q5T200 1668 aaKnown RBP24.7■■□□□ 1.55
HTATSF1-204ENST00000535601 NLRP13Q86W25 1043 aa24.7■■□□□ 1.55
HTATSF1-204ENST00000535601 ARHGAP31Q2M1Z3 1444 aa24.7■■□□□ 1.54
HTATSF1-204ENST00000535601 MYOM1P52179 1685 aa24.69■■□□□ 1.54
HTATSF1-204ENST00000535601 VGFO15240 615 aaPredicted RBP24.69■■□□□ 1.54
HTATSF1-204ENST00000535601 SLC52A1Q9NWF4 448 aa24.68■■□□□ 1.54
HTATSF1-204ENST00000535601 BRD4O60885 1362 aaPredicted RBP24.68■■□□□ 1.54
HTATSF1-204ENST00000535601 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
HTATSF1-204ENST00000535601 AMER1Q5JTC6 1135 aaPredicted RBP24.67■■□□□ 1.54
HTATSF1-204ENST00000535601 CDCA8Q53HL2 280 aa24.66■■□□□ 1.54
HTATSF1-204ENST00000535601 RPGRIP1LQ68CZ1 1315 aa24.66■■□□□ 1.54
HTATSF1-204ENST00000535601 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
HTATSF1-204ENST00000535601 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
HTATSF1-204ENST00000535601 SLC12A5Q9H2X9 1139 aa24.66■■□□□ 1.54
HTATSF1-204ENST00000535601 TMEM131LA2VDJ0 1609 aa24.63■■□□□ 1.53
HTATSF1-204ENST00000535601 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
HTATSF1-204ENST00000535601 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
HTATSF1-204ENST00000535601 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
HTATSF1-204ENST00000535601 TNNT2P45379 298 aaPredicted RBP24.62■■□□□ 1.53
HTATSF1-204ENST00000535601 CABP2Q9NPB3 220 aa24.6■■□□□ 1.53
HTATSF1-204ENST00000535601 PPP2R1AP30153 589 aa24.6■■□□□ 1.53
HTATSF1-204ENST00000535601 LRPPRCP42704 1394 aaKnown RBP24.6■■□□□ 1.53
HTATSF1-204ENST00000535601 ARHGEF40Q8TER5 1519 aa24.59■■□□□ 1.53
HTATSF1-204ENST00000535601 SETBP1Q9Y6X0 1596 aa24.58■■□□□ 1.53
HTATSF1-204ENST00000535601 MINK1Q8N4C8 1332 aaPredicted RBP24.57■■□□□ 1.52
HTATSF1-204ENST00000535601 CEBPAP49715 358 aaPredicted RBP24.57■■□□□ 1.52
HTATSF1-204ENST00000535601 ASXL1Q8IXJ9 1541 aa24.56■■□□□ 1.52
HTATSF1-204ENST00000535601 AGLP35573 1532 aa24.55■■□□□ 1.52
HTATSF1-204ENST00000535601 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
HTATSF1-204ENST00000535601 MYO3AQ8NEV4 1616 aa24.54■■□□□ 1.52
HTATSF1-204ENST00000535601 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
HTATSF1-204ENST00000535601 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
HTATSF1-204ENST00000535601 ARHGEF28Q8N1W1 1705 aaKnown RBP24.53■■□□□ 1.52
HTATSF1-204ENST00000535601 REREQ9P2R6 1566 aa24.52■■□□□ 1.52
HTATSF1-204ENST00000535601 CDCA7LQ96GN5 454 aa24.51■■□□□ 1.51
HTATSF1-204ENST00000535601 POGKQ9P215 609 aa24.5■■□□□ 1.51
HTATSF1-204ENST00000535601 SRPK2P78362 688 aaKnown RBP24.49■■□□□ 1.51
HTATSF1-204ENST00000535601 MYT1Q01538 1121 aa24.49■■□□□ 1.51
HTATSF1-204ENST00000535601 NSD3Q9BZ95 1437 aa24.49■■□□□ 1.51
HTATSF1-204ENST00000535601 WAPLQ7Z5K2 1190 aa24.49■■□□□ 1.51
HTATSF1-204ENST00000535601 NUDCQ9Y266 331 aa24.48■■□□□ 1.51
HTATSF1-204ENST00000535601 A2ML1A8K2U0 1454 aa24.48■■□□□ 1.51
HTATSF1-204ENST00000535601 TULP4Q9NRJ4 1543 aa24.48■■□□□ 1.51
HTATSF1-204ENST00000535601 CCDC146Q8IYE0 955 aa24.48■■□□□ 1.51
HTATSF1-204ENST00000535601 SBNO2Q9Y2G9 1366 aa24.47■■□□□ 1.51
HTATSF1-204ENST00000535601 EVC2Q86UK5 1308 aa24.45■■□□□ 1.51
HTATSF1-204ENST00000535601 RIMS2Q9UQ26 1411 aa24.45■■□□□ 1.5
HTATSF1-204ENST00000535601 SPATA31D1Q6ZQQ2 1576 aa24.44■■□□□ 1.5
HTATSF1-204ENST00000535601 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
HTATSF1-204ENST00000535601 ALKQ9UM73 1620 aa24.44■■□□□ 1.5
HTATSF1-204ENST00000535601 WDR43Q15061 677 aaKnown RBP eCLIP24.43■■□□□ 1.5
HTATSF1-204ENST00000535601 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
HTATSF1-204ENST00000535601 SMG6Q86US8 1419 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms