RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
BEST1-208ENST00000534553 MROH2AA6NES4 1674 aa18.42■□□□□ 0.54
BEST1-208ENST00000534553 ARHGEF40Q8TER5 1519 aa18.42■□□□□ 0.54
BEST1-208ENST00000534553 TESK2Q96S53 571 aa18.41■□□□□ 0.54
BEST1-208ENST00000534553 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
BEST1-208ENST00000534553 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
BEST1-208ENST00000534553 SYNMO15061 1565 aa18.4■□□□□ 0.54
BEST1-208ENST00000534553 SETBP1Q9Y6X0 1596 aa18.39■□□□□ 0.53
BEST1-208ENST00000534553 POLR3GLQ9BT43 218 aa18.39■□□□□ 0.53
BEST1-208ENST00000534553 SIGLEC1Q9BZZ2 1709 aa18.38■□□□□ 0.53
BEST1-208ENST00000534553 PPLO60437 1756 aa18.38■□□□□ 0.53
BEST1-208ENST00000534553 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
BEST1-208ENST00000534553 PIK3C2GO75747 1445 aa18.37■□□□□ 0.53
BEST1-208ENST00000534553 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
BEST1-208ENST00000534553 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
BEST1-208ENST00000534553 CHGAP10645 457 aaKnown RBP18.35■□□□□ 0.53
BEST1-208ENST00000534553 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
BEST1-208ENST00000534553 VGFO15240 615 aaPredicted RBP18.33■□□□□ 0.53
BEST1-208ENST00000534553 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.52
BEST1-208ENST00000534553 SBNO2Q9Y2G9 1366 aa18.33■□□□□ 0.52
BEST1-208ENST00000534553 RALBP1Q15311 655 aa18.33■□□□□ 0.52
BEST1-208ENST00000534553 ERVK-7P63135 1459 aa18.32■□□□□ 0.52
BEST1-208ENST00000534553 NEXMIFQ5QGS0 1516 aa18.31■□□□□ 0.52
BEST1-208ENST00000534553 MYO3AQ8NEV4 1616 aa18.31■□□□□ 0.52
BEST1-208ENST00000534553 CFAP70Q5T0N1 1121 aa18.3■□□□□ 0.52
BEST1-208ENST00000534553 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
BEST1-208ENST00000534553 MRS2Q9HD23 443 aa18.3■□□□□ 0.52
BEST1-208ENST00000534553 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
BEST1-208ENST00000534553 IDI1Q13907 227 aa18.28■□□□□ 0.52
BEST1-208ENST00000534553 SPATA31D1Q6ZQQ2 1576 aa18.28■□□□□ 0.52
BEST1-208ENST00000534553 TMEM131LA2VDJ0 1609 aa18.27■□□□□ 0.52
BEST1-208ENST00000534553 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
BEST1-208ENST00000534553 CLTCQ00610 1675 aaKnown RBP18.26■□□□□ 0.51
BEST1-208ENST00000534553 MYBBP1AQ9BQG0 1328 aaKnown RBP18.25■□□□□ 0.51
BEST1-208ENST00000534553 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
BEST1-208ENST00000534553 PER1O15534 1290 aaPredicted RBP18.24■□□□□ 0.51
BEST1-208ENST00000534553 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
BEST1-208ENST00000534553 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
BEST1-208ENST00000534553 ESF1Q9H501 851 aaKnown RBP18.23■□□□□ 0.51
BEST1-208ENST00000534553 PARD3Q8TEW0 1356 aa18.23■□□□□ 0.51
BEST1-208ENST00000534553 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
BEST1-208ENST00000534553 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
BEST1-208ENST00000534553 PANK3Q9H999 370 aa18.2■□□□□ 0.5
BEST1-208ENST00000534553 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
BEST1-208ENST00000534553 NLRP13Q86W25 1043 aa18.19■□□□□ 0.5
BEST1-208ENST00000534553 FBXO31Q5XUX0 539 aaPredicted RBP18.18■□□□□ 0.5
BEST1-208ENST00000534553 TMC1Q8TDI8 760 aa18.18■□□□□ 0.5
BEST1-208ENST00000534553 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
BEST1-208ENST00000534553 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
BEST1-208ENST00000534553 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
BEST1-208ENST00000534553 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
BEST1-208ENST00000534553 FAM9BQ8IZU0 186 aa18.16■□□□□ 0.5
BEST1-208ENST00000534553 ZBED9Q6R2W3 1325 aa18.16■□□□□ 0.5
BEST1-208ENST00000534553 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
BEST1-208ENST00000534553 MYOM1P52179 1685 aa18.15■□□□□ 0.5
BEST1-208ENST00000534553 A2ML1A8K2U0 1454 aa18.15■□□□□ 0.5
BEST1-208ENST00000534553 MYO5BQ9ULV0 1848 aa18.14■□□□□ 0.49
BEST1-208ENST00000534553 QRICH2Q9H0J4 1663 aa18.14■□□□□ 0.49
BEST1-208ENST00000534553 MLECQ14165 292 aa18.14■□□□□ 0.49
BEST1-208ENST00000534553 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
BEST1-208ENST00000534553 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
BEST1-208ENST00000534553 INSRP06213 1382 aa18.13■□□□□ 0.49
BEST1-208ENST00000534553 PNISRQ8TF01 805 aaKnown RBP18.12■□□□□ 0.49
BEST1-208ENST00000534553 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
BEST1-208ENST00000534553 ARHGEF28Q8N1W1 1705 aaKnown RBP18.11■□□□□ 0.49
BEST1-208ENST00000534553 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
BEST1-208ENST00000534553 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
BEST1-208ENST00000534553 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
BEST1-208ENST00000534553 TNRQ92752 1358 aa18.09■□□□□ 0.49
BEST1-208ENST00000534553 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
BEST1-208ENST00000534553 RIMS2Q9UQ26 1411 aa18.08■□□□□ 0.49
BEST1-208ENST00000534553 ALKQ9UM73 1620 aa18.08■□□□□ 0.48
BEST1-208ENST00000534553 CNGB1Q14028 1251 aaPredicted RBP18.07■□□□□ 0.48
BEST1-208ENST00000534553 AMER1Q5JTC6 1135 aaPredicted RBP18.07■□□□□ 0.48
BEST1-208ENST00000534553 NINLQ9Y2I6 1382 aa18.07■□□□□ 0.48
BEST1-208ENST00000534553 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
BEST1-208ENST00000534553 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
BEST1-208ENST00000534553 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
BEST1-208ENST00000534553 NLRP1Q9C000 1473 aa18.06■□□□□ 0.48
BEST1-208ENST00000534553 DLC1Q96QB1 1528 aa18.05■□□□□ 0.48
BEST1-208ENST00000534553 NEFLP07196 543 aa18.05■□□□□ 0.48
BEST1-208ENST00000534553 PTPRMP28827 1452 aa18.04■□□□□ 0.48
BEST1-208ENST00000534553 TULP4Q9NRJ4 1543 aa18.01■□□□□ 0.47
BEST1-208ENST00000534553 USP32Q8NFA0 1604 aa18.01■□□□□ 0.47
BEST1-208ENST00000534553 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
BEST1-208ENST00000534553 ATAD2Q6PL18 1390 aa18■□□□□ 0.47
BEST1-208ENST00000534553 UBR1Q8IWV7 1749 aa17.99■□□□□ 0.47
BEST1-208ENST00000534553 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
BEST1-208ENST00000534553 TMEM2Q9UHN6 1383 aa17.98■□□□□ 0.47
BEST1-208ENST00000534553 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
BEST1-208ENST00000534553 PPP2R1AP30153 589 aa17.98■□□□□ 0.47
BEST1-208ENST00000534553 NSD2O96028 1365 aa17.97■□□□□ 0.47
BEST1-208ENST00000534553 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
BEST1-208ENST00000534553 POGKQ9P215 609 aa17.97■□□□□ 0.47
BEST1-208ENST00000534553 STK26Q9P289 416 aa17.95■□□□□ 0.46
BEST1-208ENST00000534553 BLMP54132 1417 aaPredicted RBP17.95■□□□□ 0.46
BEST1-208ENST00000534553 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
BEST1-208ENST00000534553 NRXN3Q9Y4C0 1643 aa17.95■□□□□ 0.46
BEST1-208ENST00000534553 FER1L4A9Z1Z3 1794 aa17.95■□□□□ 0.46
BEST1-208ENST00000534553 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms