RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RIMS2Q9UQ26 1411 aa25.29■■□□□ 1.64
NXF1-216ENST00000533499 HDGFP51858 240 aaKnown RBP25.28■■□□□ 1.64
NXF1-216ENST00000533499 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
NXF1-216ENST00000533499 LTKP29376 864 aa25.24■■□□□ 1.63
NXF1-216ENST00000533499 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.24■■□□□ 1.63
NXF1-216ENST00000533499 KDM2AQ9Y2K7 1162 aa25.24■■□□□ 1.63
NXF1-216ENST00000533499 SLIT1O75093 1534 aa25.23■■□□□ 1.63
NXF1-216ENST00000533499 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
NXF1-216ENST00000533499 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
NXF1-216ENST00000533499 RPGRIP1LQ68CZ1 1315 aa25.21■■□□□ 1.63
NXF1-216ENST00000533499 CLSPNQ9HAW4 1339 aa25.21■■□□□ 1.63
NXF1-216ENST00000533499 DCAF11Q8TEB1 546 aa25.21■■□□□ 1.63
NXF1-216ENST00000533499 TONSLQ96HA7 1378 aa25.2■■□□□ 1.63
NXF1-216ENST00000533499 POLR1AO95602 1720 aaPredicted RBP25.2■■□□□ 1.62
NXF1-216ENST00000533499 ZFYVE9O95405 1425 aa25.2■■□□□ 1.62
NXF1-216ENST00000533499 NEXMIFQ5QGS0 1516 aa25.19■■□□□ 1.62
NXF1-216ENST00000533499 VGFO15240 615 aaPredicted RBP25.17■■□□□ 1.62
NXF1-216ENST00000533499 PPLO60437 1756 aa25.17■■□□□ 1.62
NXF1-216ENST00000533499 STRCQ7RTU9 1775 aa25.16■■□□□ 1.62
NXF1-216ENST00000533499 L3MBTL2Q969R5 705 aa25.16■■□□□ 1.62
NXF1-216ENST00000533499 NEURL4Q96JN8 1562 aa25.16■■□□□ 1.62
NXF1-216ENST00000533499 NPHP4O75161 1426 aaPredicted RBP25.15■■□□□ 1.62
NXF1-216ENST00000533499 ADGRF5Q8IZF2 1346 aa25.12■■□□□ 1.61
NXF1-216ENST00000533499 IFT172Q9UG01 1749 aa25.12■■□□□ 1.61
NXF1-216ENST00000533499 SLC26A8Q96RN1 970 aa25.11■■□□□ 1.61
NXF1-216ENST00000533499 DMRT2Q9Y5R5 561 aa25.11■■□□□ 1.61
NXF1-216ENST00000533499 PLEKHG1Q9ULL1 1385 aa25.1■■□□□ 1.61
NXF1-216ENST00000533499 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
NXF1-216ENST00000533499 MED14O60244 1454 aa25.06■■□□□ 1.6
NXF1-216ENST00000533499 MYOM2P54296 1465 aa25.05■■□□□ 1.6
NXF1-216ENST00000533499 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
NXF1-216ENST00000533499 CFAP70Q5T0N1 1121 aa25■■□□□ 1.59
NXF1-216ENST00000533499 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
NXF1-216ENST00000533499 SETBP1Q9Y6X0 1596 aa24.99■■□□□ 1.59
NXF1-216ENST00000533499 NRXN3Q9Y4C0 1643 aa24.98■■□□□ 1.59
NXF1-216ENST00000533499 ADAMTS13Q76LX8 1427 aa24.98■■□□□ 1.59
NXF1-216ENST00000533499 TIMELESSQ9UNS1 1208 aa24.97■■□□□ 1.59
NXF1-216ENST00000533499 TBX22Q9Y458 520 aa24.97■■□□□ 1.59
NXF1-216ENST00000533499 ALKQ9UM73 1620 aa24.97■■□□□ 1.59
NXF1-216ENST00000533499 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
NXF1-216ENST00000533499 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.59
NXF1-216ENST00000533499 TMEM132EQ6IEE7 984 aa24.95■■□□□ 1.58
NXF1-216ENST00000533499 C14orf93Q9H972 538 aaKnown RBP24.94■■□□□ 1.58
NXF1-216ENST00000533499 DIP2AQ14689 1571 aa24.93■■□□□ 1.58
NXF1-216ENST00000533499 NBPF8Q3BBV2 869 aa24.93■■□□□ 1.58
NXF1-216ENST00000533499 METP08581 1390 aa24.93■■□□□ 1.58
NXF1-216ENST00000533499 ZNF335Q9H4Z2 1342 aaPredicted RBP24.92■■□□□ 1.58
NXF1-216ENST00000533499 STK26Q9P289 416 aa24.92■■□□□ 1.58
NXF1-216ENST00000533499 LAMC1P11047 1609 aa24.9■■□□□ 1.58
NXF1-216ENST00000533499 AMOTL2Q9Y2J4 779 aa24.88■■□□□ 1.57
NXF1-216ENST00000533499 SETD1AO15047 1707 aaKnown RBP24.87■■□□□ 1.57
NXF1-216ENST00000533499 NBPF1Q3BBV0 1214 aa24.87■■□□□ 1.57
NXF1-216ENST00000533499 KCNA6P17658 529 aa24.86■■□□□ 1.57
NXF1-216ENST00000533499 ROCK2O75116 1388 aaKnown RBP24.85■■□□□ 1.57
NXF1-216ENST00000533499 PIK3R4Q99570 1358 aa24.84■■□□□ 1.57
NXF1-216ENST00000533499 PTPRUQ92729 1446 aa24.84■■□□□ 1.57
NXF1-216ENST00000533499 CHD2O14647 1828 aaKnown RBP24.84■■□□□ 1.57
NXF1-216ENST00000533499 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.57
NXF1-216ENST00000533499 ASXL1Q8IXJ9 1541 aa24.83■■□□□ 1.57
NXF1-216ENST00000533499 KIAA1210Q9ULL0 1709 aa24.83■■□□□ 1.57
NXF1-216ENST00000533499 YTHDC2Q9H6S0 1430 aaKnown RBP24.81■■□□□ 1.56
NXF1-216ENST00000533499 PROSER2Q86WR7 435 aaPredicted RBP24.81■■□□□ 1.56
NXF1-216ENST00000533499 TRAK1Q9UPV9 953 aa24.81■■□□□ 1.56
NXF1-216ENST00000533499 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
NXF1-216ENST00000533499 RBM33Q96EV2 1170 aaKnown RBP24.8■■□□□ 1.56
NXF1-216ENST00000533499 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
NXF1-216ENST00000533499 CARD11Q9BXL7 1154 aa24.79■■□□□ 1.56
NXF1-216ENST00000533499 C14orf37Q86TY3 774 aa24.78■■□□□ 1.56
NXF1-216ENST00000533499 ADGRB1O14514 1584 aa24.78■■□□□ 1.56
NXF1-216ENST00000533499 RALGAPBQ86X10 1494 aa24.77■■□□□ 1.56
NXF1-216ENST00000533499 NWD1Q149M9 1564 aa24.76■■□□□ 1.55
NXF1-216ENST00000533499 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
NXF1-216ENST00000533499 SAFB2Q14151 953 aaKnown RBP eCLIP24.75■■□□□ 1.55
NXF1-216ENST00000533499 POGKQ9P215 609 aa24.75■■□□□ 1.55
NXF1-216ENST00000533499 CPS1P31327 1500 aa24.73■■□□□ 1.55
NXF1-216ENST00000533499 ABCC11Q96J66 1382 aa24.73■■□□□ 1.55
NXF1-216ENST00000533499 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
NXF1-216ENST00000533499 NKTRP30414 1462 aaKnown RBP24.72■■□□□ 1.55
NXF1-216ENST00000533499 ROBO2Q9HCK4 1378 aa24.72■■□□□ 1.55
NXF1-216ENST00000533499 WAPLQ7Z5K2 1190 aa24.72■■□□□ 1.55
NXF1-216ENST00000533499 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
NXF1-216ENST00000533499 PRAM1Q96QH2 718 aa24.71■■□□□ 1.55
NXF1-216ENST00000533499 TMEM94Q12767 1356 aa24.7■■□□□ 1.55
NXF1-216ENST00000533499 KNDC1Q76NI1 1749 aa24.69■■□□□ 1.54
NXF1-216ENST00000533499 LRRC7Q96NW7 1537 aa24.69■■□□□ 1.54
NXF1-216ENST00000533499 PTCH1Q13635 1447 aa24.68■■□□□ 1.54
NXF1-216ENST00000533499 GPRASP1Q5JY77 1395 aa24.67■■□□□ 1.54
NXF1-216ENST00000533499 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
NXF1-216ENST00000533499 TECPR2O15040 1411 aa24.67■■□□□ 1.54
NXF1-216ENST00000533499 EIF3AQ14152 1382 aaKnown RBP24.65■■□□□ 1.54
NXF1-216ENST00000533499 ARHGEF28Q8N1W1 1705 aaKnown RBP24.64■■□□□ 1.54
NXF1-216ENST00000533499 DLC1Q96QB1 1528 aa24.64■■□□□ 1.53
NXF1-216ENST00000533499 MINK1Q8N4C8 1332 aaPredicted RBP24.63■■□□□ 1.53
NXF1-216ENST00000533499 CERKQ8TCT0 537 aa24.63■■□□□ 1.53
NXF1-216ENST00000533499 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
NXF1-216ENST00000533499 FAM135BQ49AJ0 1406 aa24.62■■□□□ 1.53
NXF1-216ENST00000533499 SIRT1Q96EB6 747 aa24.62■■□□□ 1.53
NXF1-216ENST00000533499 HIRIP3Q9BW71 556 aaPredicted RBP24.61■■□□□ 1.53
NXF1-216ENST00000533499 USP47Q96K76 1375 aa24.61■■□□□ 1.53
NXF1-216ENST00000533499 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms