RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
CHEK1-213ENST00000532449 MLECQ14165 292 aa13.55□□□□□ -0.24
CHEK1-213ENST00000532449 GRIN2BQ13224 1484 aa13.55□□□□□ -0.24
CHEK1-213ENST00000532449 HMOX1P09601 288 aa13.55□□□□□ -0.24
CHEK1-213ENST00000532449 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
CHEK1-213ENST00000532449 WDR62O43379 1518 aa13.55□□□□□ -0.24
CHEK1-213ENST00000532449 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
CHEK1-213ENST00000532449 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
CHEK1-213ENST00000532449 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
CHEK1-213ENST00000532449 DZIP1LQ8IYY4 767 aaKnown RBP13.54□□□□□ -0.24
CHEK1-213ENST00000532449 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
CHEK1-213ENST00000532449 AFAP1Q8N556 730 aa13.53□□□□□ -0.24
CHEK1-213ENST00000532449 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
CHEK1-213ENST00000532449 MAP3K1Q13233 1512 aa13.53□□□□□ -0.24
CHEK1-213ENST00000532449 MCTP1Q6DN14 999 aa13.53□□□□□ -0.24
CHEK1-213ENST00000532449 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
CHEK1-213ENST00000532449 CHMP5Q9NZZ3 219 aa13.53□□□□□ -0.24
CHEK1-213ENST00000532449 CHMP3Q9Y3E7 222 aa13.53□□□□□ -0.24
CHEK1-213ENST00000532449 DHX29Q7Z478 1369 aaKnown RBP13.53□□□□□ -0.24
CHEK1-213ENST00000532449 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.24
CHEK1-213ENST00000532449 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.24
CHEK1-213ENST00000532449 DISP3Q9P2K9 1392 aa13.52□□□□□ -0.25
CHEK1-213ENST00000532449 THUMPD2Q9BTF0 503 aaKnown RBP13.52□□□□□ -0.25
CHEK1-213ENST00000532449 DAPK1P53355 1430 aa13.52□□□□□ -0.25
CHEK1-213ENST00000532449 FBLN1P23142 703 aa13.52□□□□□ -0.25
CHEK1-213ENST00000532449 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.25
CHEK1-213ENST00000532449 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
CHEK1-213ENST00000532449 SLFN5Q08AF3 891 aa13.51□□□□□ -0.25
CHEK1-213ENST00000532449 MINK1Q8N4C8 1332 aaPredicted RBP13.51□□□□□ -0.25
CHEK1-213ENST00000532449 MCM4P33991 863 aa13.51□□□□□ -0.25
CHEK1-213ENST00000532449 FAM43AQ8N2R8 423 aa13.51□□□□□ -0.25
CHEK1-213ENST00000532449 CABP2Q9NPB3 220 aa13.51□□□□□ -0.25
CHEK1-213ENST00000532449 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
CHEK1-213ENST00000532449 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
CHEK1-213ENST00000532449 CAVIN1Q6NZI2 390 aaKnown RBP13.5□□□□□ -0.25
CHEK1-213ENST00000532449 ABCC5O15440 1437 aa13.49□□□□□ -0.25
CHEK1-213ENST00000532449 RIPK4P57078 832 aa13.49□□□□□ -0.25
CHEK1-213ENST00000532449 PLEKHH1Q9ULM0 1364 aa13.48□□□□□ -0.25
CHEK1-213ENST00000532449 RLBP1P12271 317 aa13.48□□□□□ -0.25
CHEK1-213ENST00000532449 THOC2Q8NI27 1593 aaKnown RBP13.48□□□□□ -0.25
CHEK1-213ENST00000532449 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHEK1-213ENST00000532449 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
CHEK1-213ENST00000532449 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
CHEK1-213ENST00000532449 WWC1Q8IX03 1113 aa13.47□□□□□ -0.25
CHEK1-213ENST00000532449 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
CHEK1-213ENST00000532449 DTNBO60941 627 aa13.47□□□□□ -0.25
CHEK1-213ENST00000532449 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
CHEK1-213ENST00000532449 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.26
CHEK1-213ENST00000532449 NOB1Q9ULX3 412 aaKnown RBP13.46□□□□□ -0.26
CHEK1-213ENST00000532449 PRDM10Q9NQV6 1147 aa13.45□□□□□ -0.26
CHEK1-213ENST00000532449 NAP1L2Q9ULW6 460 aaPredicted RBP13.45□□□□□ -0.26
CHEK1-213ENST00000532449 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
CHEK1-213ENST00000532449 DDX11L8A8MPP1 907 aa13.45□□□□□ -0.26
CHEK1-213ENST00000532449 EIF4G3O43432 1585 aaKnown RBP13.44□□□□□ -0.26
CHEK1-213ENST00000532449 ESPNB1AK53 854 aa13.44□□□□□ -0.26
CHEK1-213ENST00000532449 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
CHEK1-213ENST00000532449 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
CHEK1-213ENST00000532449 RILPL2Q969X0 211 aa13.44□□□□□ -0.26
CHEK1-213ENST00000532449 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
CHEK1-213ENST00000532449 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
CHEK1-213ENST00000532449 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
CHEK1-213ENST00000532449 PRPF40AO75400 957 aaKnown RBP13.43□□□□□ -0.26
CHEK1-213ENST00000532449 NPM1P06748 294 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHEK1-213ENST00000532449 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
CHEK1-213ENST00000532449 ZMYND15Q9H091 742 aa13.42□□□□□ -0.26
CHEK1-213ENST00000532449 MRE11P49959 708 aa13.42□□□□□ -0.26
CHEK1-213ENST00000532449 CCDC9Q9Y3X0 531 aaKnown RBP13.42□□□□□ -0.26
CHEK1-213ENST00000532449 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
CHEK1-213ENST00000532449 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
CHEK1-213ENST00000532449 KCNJ4P48050 445 aa13.41□□□□□ -0.26
CHEK1-213ENST00000532449 TMEM57Q8N5G2 664 aa13.41□□□□□ -0.26
CHEK1-213ENST00000532449 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
CHEK1-213ENST00000532449 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
CHEK1-213ENST00000532449 CUL7Q14999 1698 aa13.41□□□□□ -0.26
CHEK1-213ENST00000532449 SSFA2P28290 1259 aa13.41□□□□□ -0.26
CHEK1-213ENST00000532449 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
CHEK1-213ENST00000532449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHEK1-213ENST00000532449 DRC7Q8IY82 874 aa13.4□□□□□ -0.26
CHEK1-213ENST00000532449 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
CHEK1-213ENST00000532449 MIA2Q96PC5 1412 aa13.4□□□□□ -0.27
CHEK1-213ENST00000532449 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-213ENST00000532449 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-213ENST00000532449 C9orf84Q5VXU9 1444 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-213ENST00000532449 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
CHEK1-213ENST00000532449 SSH1Q8WYL5 1049 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 EHBP1L1Q8N3D4 1523 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 UBE2Q2Q8WVN8 375 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 CHAMP1Q96JM3 812 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 DDX19BQ9UMR2 479 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 GRIN2AQ12879 1464 aa13.39□□□□□ -0.27
CHEK1-213ENST00000532449 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
CHEK1-213ENST00000532449 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
CHEK1-213ENST00000532449 KDM6BO15054 1643 aa13.38□□□□□ -0.27
CHEK1-213ENST00000532449 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
CHEK1-213ENST00000532449 CARMIL2Q6F5E8 1435 aa13.38□□□□□ -0.27
CHEK1-213ENST00000532449 ESF1Q9H501 851 aaKnown RBP13.38□□□□□ -0.27
CHEK1-213ENST00000532449 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms