RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
RELA-216ENST00000531238 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
RELA-216ENST00000531238 TRPM2O94759 1503 aa24.17■■□□□ 1.46
RELA-216ENST00000531238 CLTCL1P53675 1640 aa24.17■■□□□ 1.46
RELA-216ENST00000531238 HDGFP51858 240 aaKnown RBP24.15■■□□□ 1.46
RELA-216ENST00000531238 HRCP23327 699 aa24.14■■□□□ 1.45
RELA-216ENST00000531238 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.14■■□□□ 1.45
RELA-216ENST00000531238 PLEKHG1Q9ULL1 1385 aa24.13■■□□□ 1.45
RELA-216ENST00000531238 ACIN1Q9UKV3 1341 aaKnown RBP24.12■■□□□ 1.45
RELA-216ENST00000531238 STRCP1A6NGW2 1772 aa24.12■■□□□ 1.45
RELA-216ENST00000531238 PPP1R15AO75807 674 aaPredicted RBP24.12■■□□□ 1.45
RELA-216ENST00000531238 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
RELA-216ENST00000531238 BCANQ96GW7 911 aa24.12■■□□□ 1.45
RELA-216ENST00000531238 CPS1P31327 1500 aa24.09■■□□□ 1.45
RELA-216ENST00000531238 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
RELA-216ENST00000531238 KCNA6P17658 529 aa24.07■■□□□ 1.44
RELA-216ENST00000531238 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
RELA-216ENST00000531238 ADAMTS13Q76LX8 1427 aa24.06■■□□□ 1.44
RELA-216ENST00000531238 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
RELA-216ENST00000531238 NEXMIFQ5QGS0 1516 aa24.02■■□□□ 1.44
RELA-216ENST00000531238 UBAP1LF5GYI3 381 aa24.01■■□□□ 1.43
RELA-216ENST00000531238 RBM33Q96EV2 1170 aaKnown RBP24.01■■□□□ 1.43
RELA-216ENST00000531238 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
RELA-216ENST00000531238 KIF1BO60333 1816 aa24■■□□□ 1.43
RELA-216ENST00000531238 RGL3Q3MIN7 710 aa24■■□□□ 1.43
RELA-216ENST00000531238 SPATA31E1Q6ZUB1 1445 aa23.99■■□□□ 1.43
RELA-216ENST00000531238 RPGRIP1LQ68CZ1 1315 aa23.98■■□□□ 1.43
RELA-216ENST00000531238 ANKRD30BQ9BXX2 1392 aa23.98■■□□□ 1.43
RELA-216ENST00000531238 PROSER2Q86WR7 435 aaPredicted RBP23.96■■□□□ 1.43
RELA-216ENST00000531238 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.43
RELA-216ENST00000531238 PTPRUQ92729 1446 aa23.95■■□□□ 1.42
RELA-216ENST00000531238 VGFO15240 615 aaPredicted RBP23.95■■□□□ 1.42
RELA-216ENST00000531238 METP08581 1390 aa23.93■■□□□ 1.42
RELA-216ENST00000531238 TMEM94Q12767 1356 aa23.93■■□□□ 1.42
RELA-216ENST00000531238 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
RELA-216ENST00000531238 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
RELA-216ENST00000531238 SETBP1Q9Y6X0 1596 aa23.92■■□□□ 1.42
RELA-216ENST00000531238 CHD2O14647 1828 aaKnown RBP23.92■■□□□ 1.42
RELA-216ENST00000531238 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
RELA-216ENST00000531238 NWD1Q149M9 1564 aa23.91■■□□□ 1.42
RELA-216ENST00000531238 TOM1O60784 492 aa23.91■■□□□ 1.42
RELA-216ENST00000531238 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
RELA-216ENST00000531238 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
RELA-216ENST00000531238 PIP4K2BP78356 416 aa23.89■■□□□ 1.41
RELA-216ENST00000531238 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
RELA-216ENST00000531238 TRIM26Q12899 539 aaPredicted RBP23.88■■□□□ 1.41
RELA-216ENST00000531238 PPLO60437 1756 aa23.86■■□□□ 1.41
RELA-216ENST00000531238 NKTRP30414 1462 aaKnown RBP23.86■■□□□ 1.41
RELA-216ENST00000531238 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
RELA-216ENST00000531238 IFT172Q9UG01 1749 aa23.79■■□□□ 1.4
RELA-216ENST00000531238 SETD1AO15047 1707 aaKnown RBP23.78■■□□□ 1.4
RELA-216ENST00000531238 HSPA1LP34931 641 aa23.77■■□□□ 1.4
RELA-216ENST00000531238 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
RELA-216ENST00000531238 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
RELA-216ENST00000531238 TMEM132EQ6IEE7 984 aa23.76■■□□□ 1.39
RELA-216ENST00000531238 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
RELA-216ENST00000531238 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
RELA-216ENST00000531238 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
RELA-216ENST00000531238 C14orf93Q9H972 538 aaKnown RBP23.74■■□□□ 1.39
RELA-216ENST00000531238 KDM2AQ9Y2K7 1162 aa23.74■■□□□ 1.39
RELA-216ENST00000531238 MSH6P52701 1360 aa23.74■■□□□ 1.39
RELA-216ENST00000531238 CFAP70Q5T0N1 1121 aa23.73■■□□□ 1.39
RELA-216ENST00000531238 DCAF11Q8TEB1 546 aa23.73■■□□□ 1.39
RELA-216ENST00000531238 NRXN1Q9ULB1 1477 aa23.73■■□□□ 1.39
RELA-216ENST00000531238 C14orf37Q86TY3 774 aa23.72■■□□□ 1.39
RELA-216ENST00000531238 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
RELA-216ENST00000531238 ROBO2Q9HCK4 1378 aa23.72■■□□□ 1.39
RELA-216ENST00000531238 SIN3AQ96ST3 1273 aa23.7■■□□□ 1.38
RELA-216ENST00000531238 MYOM2P54296 1465 aa23.69■■□□□ 1.38
RELA-216ENST00000531238 STK26Q9P289 416 aa23.69■■□□□ 1.38
RELA-216ENST00000531238 FAM135BQ49AJ0 1406 aa23.68■■□□□ 1.38
RELA-216ENST00000531238 ASXL1Q8IXJ9 1541 aa23.68■■□□□ 1.38
RELA-216ENST00000531238 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.66■■□□□ 1.38
RELA-216ENST00000531238 ATF3P18847 181 aa23.65■■□□□ 1.38
RELA-216ENST00000531238 WAPLQ7Z5K2 1190 aa23.65■■□□□ 1.38
RELA-216ENST00000531238 CADPS2Q86UW7 1296 aa23.65■■□□□ 1.38
RELA-216ENST00000531238 PTCH1Q13635 1447 aa23.65■■□□□ 1.38
RELA-216ENST00000531238 PRAG1Q86YV5 1406 aa23.65■■□□□ 1.38
RELA-216ENST00000531238 LRPPRCP42704 1394 aaKnown RBP23.65■■□□□ 1.38
RELA-216ENST00000531238 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
RELA-216ENST00000531238 STAC3Q96MF2 364 aa23.62■■□□□ 1.37
RELA-216ENST00000531238 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
RELA-216ENST00000531238 ADGRL3Q9HAR2 1447 aa23.6■■□□□ 1.37
RELA-216ENST00000531238 NEUROD1Q13562 356 aa23.6■■□□□ 1.37
RELA-216ENST00000531238 PLEKHH1Q9ULM0 1364 aa23.6■■□□□ 1.37
RELA-216ENST00000531238 TECPR2O15040 1411 aa23.59■■□□□ 1.37
RELA-216ENST00000531238 L3MBTL2Q969R5 705 aa23.58■■□□□ 1.37
RELA-216ENST00000531238 ROBO1Q9Y6N7 1651 aa23.57■■□□□ 1.36
RELA-216ENST00000531238 SIRT1Q96EB6 747 aa23.57■■□□□ 1.36
RELA-216ENST00000531238 DCCP43146 1447 aa23.57■■□□□ 1.36
RELA-216ENST00000531238 MST1RQ04912 1400 aa23.56■■□□□ 1.36
RELA-216ENST00000531238 BRINP3Q76B58 766 aa23.55■■□□□ 1.36
RELA-216ENST00000531238 NALCNQ8IZF0 1738 aa23.55■■□□□ 1.36
RELA-216ENST00000531238 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
RELA-216ENST00000531238 PCGF6Q9BYE7 350 aa23.54■■□□□ 1.36
RELA-216ENST00000531238 TRAK1Q9UPV9 953 aa23.52■■□□□ 1.36
RELA-216ENST00000531238 NBPF1Q3BBV0 1214 aa23.51■■□□□ 1.35
RELA-216ENST00000531238 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
RELA-216ENST00000531238 LAMC1P11047 1609 aa23.5■■□□□ 1.35
RELA-216ENST00000531238 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms