RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CDK11BP21127 795 aaKnown RBP9.82□□□□□ -0.84
PTPRK-219ENST00000531050 NASPP49321 788 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-219ENST00000531050 IRX5P78411 483 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-219ENST00000531050 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
PTPRK-219ENST00000531050 ZNF692Q9BU19 519 aaPredicted RBP9.81□□□□□ -0.84
PTPRK-219ENST00000531050 PANK3Q9H999 370 aa9.81□□□□□ -0.84
PTPRK-219ENST00000531050 GCC2Q8IWJ2 1684 aa9.81□□□□□ -0.84
PTPRK-219ENST00000531050 NAIPQ13075 1403 aa9.81□□□□□ -0.84
PTPRK-219ENST00000531050 WDR62O43379 1518 aa9.81□□□□□ -0.84
PTPRK-219ENST00000531050 IRX3P78415 501 aaPredicted RBP9.81□□□□□ -0.84
PTPRK-219ENST00000531050 TCOF1Q13428 1488 aaKnown RBP9.8□□□□□ -0.84
PTPRK-219ENST00000531050 CSPP1Q1MSJ5 1256 aa9.8□□□□□ -0.84
PTPRK-219ENST00000531050 CHMP4AQ9BY43 222 aa9.8□□□□□ -0.84
PTPRK-219ENST00000531050 SLC20A2Q08357 652 aa9.8□□□□□ -0.84
PTPRK-219ENST00000531050 AMER1Q5JTC6 1135 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-219ENST00000531050 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-219ENST00000531050 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
PTPRK-219ENST00000531050 EPRSP07814 1512 aaKnown RBP9.79□□□□□ -0.84
PTPRK-219ENST00000531050 E9PSI1 815 aa9.79□□□□□ -0.84
PTPRK-219ENST00000531050 MAPK8IP2Q13387 824 aaPredicted RBP9.79□□□□□ -0.84
PTPRK-219ENST00000531050 JARID2Q92833 1246 aaPredicted RBP9.79□□□□□ -0.84
PTPRK-219ENST00000531050 CDK13Q14004 1512 aaKnown RBP9.78□□□□□ -0.84
PTPRK-219ENST00000531050 MYBBP1AQ9BQG0 1328 aaKnown RBP9.78□□□□□ -0.84
PTPRK-219ENST00000531050 MIA2Q96PC5 1412 aa9.78□□□□□ -0.84
PTPRK-219ENST00000531050 ROCK2O75116 1388 aaKnown RBP9.78□□□□□ -0.84
PTPRK-219ENST00000531050 IFT140Q96RY7 1462 aa9.77□□□□□ -0.84
PTPRK-219ENST00000531050 MYRIPQ8NFW9 859 aa9.77□□□□□ -0.85
PTPRK-219ENST00000531050 ZKSCAN5Q9Y2L8 839 aa9.77□□□□□ -0.85
PTPRK-219ENST00000531050 IGSF3O75054 1194 aa9.77□□□□□ -0.85
PTPRK-219ENST00000531050 DDIT3P35638 169 aa9.77□□□□□ -0.85
PTPRK-219ENST00000531050 TSC1Q92574 1164 aa9.77□□□□□ -0.85
PTPRK-219ENST00000531050 PDLIM2Q96JY6 352 aa9.77□□□□□ -0.85
PTPRK-219ENST00000531050 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
PTPRK-219ENST00000531050 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-219ENST00000531050 KIAA0556O60303 1618 aa9.76□□□□□ -0.85
PTPRK-219ENST00000531050 SKOR2Q2VWA4 1001 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-219ENST00000531050 CERS3Q8IU89 383 aa9.76□□□□□ -0.85
PTPRK-219ENST00000531050 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
PTPRK-219ENST00000531050 IGHDP01880 384 aa9.75□□□□□ -0.85
PTPRK-219ENST00000531050 MCM5P33992 734 aa9.75□□□□□ -0.85
PTPRK-219ENST00000531050 POLR3GLQ9BT43 218 aa9.75□□□□□ -0.85
PTPRK-219ENST00000531050 MAPK8IP3Q9UPT6 1336 aa9.75□□□□□ -0.85
PTPRK-219ENST00000531050 KCNJ4P48050 445 aa9.75□□□□□ -0.85
PTPRK-219ENST00000531050 TNPO1Q92973 898 aaKnown RBP9.75□□□□□ -0.85
PTPRK-219ENST00000531050 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
PTPRK-219ENST00000531050 NCOA3Q9Y6Q9 1424 aa9.75□□□□□ -0.85
PTPRK-219ENST00000531050 EIF4G3O43432 1585 aaKnown RBP9.74□□□□□ -0.85
PTPRK-219ENST00000531050 RTEL1-TNFRSF6BF6WH68 1400 aa9.74□□□□□ -0.85
PTPRK-219ENST00000531050 DNAJC2Q99543 621 aaKnown RBP9.74□□□□□ -0.85
PTPRK-219ENST00000531050 KDM6BO15054 1643 aa9.74□□□□□ -0.85
PTPRK-219ENST00000531050 TEX14Q8IWB6 1497 aa9.74□□□□□ -0.85
PTPRK-219ENST00000531050 SCAPERQ9BY12 1400 aa9.74□□□□□ -0.85
PTPRK-219ENST00000531050 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
PTPRK-219ENST00000531050 RALBP1Q15311 655 aa9.74□□□□□ -0.85
PTPRK-219ENST00000531050 EIF3AQ14152 1382 aaKnown RBP9.73□□□□□ -0.85
PTPRK-219ENST00000531050 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-219ENST00000531050 DISP1Q96F81 1524 aa9.73□□□□□ -0.85
PTPRK-219ENST00000531050 GTF2F1P35269 517 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTPRK-219ENST00000531050 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
PTPRK-219ENST00000531050 KIAA0586Q9BVV6 1533 aa9.73□□□□□ -0.85
PTPRK-219ENST00000531050 MMP14P50281 582 aa9.73□□□□□ -0.85
PTPRK-219ENST00000531050 NBPF1Q3BBV0 1214 aa9.73□□□□□ -0.85
PTPRK-219ENST00000531050 SAMD1Q6SPF0 538 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-219ENST00000531050 ZNF771Q7L3S4 317 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-219ENST00000531050 GRIN2AQ12879 1464 aa9.71□□□□□ -0.85
PTPRK-219ENST00000531050 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.85
PTPRK-219ENST00000531050 GBP4Q96PP9 640 aa9.71□□□□□ -0.85
PTPRK-219ENST00000531050 INSRP06213 1382 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 ZMYM4Q5VZL5 1548 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 HSP90AB1P08238 724 aaKnown RBP9.7□□□□□ -0.86
PTPRK-219ENST00000531050 CAPN2P17655 700 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 PTMSP20962 102 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 SLC52A1Q9NWF4 448 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 NUP153P49790 1475 aaKnown RBP9.7□□□□□ -0.86
PTPRK-219ENST00000531050 RBM25P49756 843 aaKnown RBP9.7□□□□□ -0.86
PTPRK-219ENST00000531050 RAB3GAP1Q15042 981 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 RRP7BPQ9NSQ0 103 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 KCNG1Q9UIX4 513 aa9.7□□□□□ -0.86
PTPRK-219ENST00000531050 DNMT1P26358 1616 aaKnown RBP9.69□□□□□ -0.86
PTPRK-219ENST00000531050 PLEKHH2Q8IVE3 1493 aa9.69□□□□□ -0.86
PTPRK-219ENST00000531050 USP47Q96K76 1375 aa9.69□□□□□ -0.86
PTPRK-219ENST00000531050 CCDC144AA2RUR9 1427 aa9.69□□□□□ -0.86
PTPRK-219ENST00000531050 TULP2O00295 520 aa9.69□□□□□ -0.86
PTPRK-219ENST00000531050 ZNF445P59923 1031 aa9.69□□□□□ -0.86
PTPRK-219ENST00000531050 HMGN5P82970 282 aaKnown RBP9.69□□□□□ -0.86
PTPRK-219ENST00000531050 AEBP1Q8IUX7 1158 aa9.69□□□□□ -0.86
PTPRK-219ENST00000531050 RBSNQ9H1K0 784 aa9.69□□□□□ -0.86
PTPRK-219ENST00000531050 RPRD2Q5VT52 1461 aaKnown RBP9.69□□□□□ -0.86
PTPRK-219ENST00000531050 FAM177BA6PVY3 158 aa9.68□□□□□ -0.86
PTPRK-219ENST00000531050 PSEN1P49768 467 aa9.68□□□□□ -0.86
PTPRK-219ENST00000531050 DUSP27Q5VZP5 1158 aa9.68□□□□□ -0.86
PTPRK-219ENST00000531050 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-219ENST00000531050 CHIC2Q9UKJ5 165 aa9.68□□□□□ -0.86
PTPRK-219ENST00000531050 ZMYM3Q14202 1370 aa9.68□□□□□ -0.86
PTPRK-219ENST00000531050 SOX12O15370 315 aa9.68□□□□□ -0.86
PTPRK-219ENST00000531050 PDCL2Q8N4E4 241 aa9.68□□□□□ -0.86
PTPRK-219ENST00000531050 CIZ1Q9ULV3 898 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-219ENST00000531050 U2AF2P26368 475 aaKnown RBP eCLIP9.67□□□□□ -0.861e-6■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms