RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 RIMS2Q9UQ26 1411 aa20.12■□□□□ 0.81
BEST1-206ENST00000529265 NEURL4Q96JN8 1562 aa20.11■□□□□ 0.81
BEST1-206ENST00000529265 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
BEST1-206ENST00000529265 SLIT1O75093 1534 aa20.11■□□□□ 0.81
BEST1-206ENST00000529265 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.1■□□□□ 0.81
BEST1-206ENST00000529265 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
BEST1-206ENST00000529265 PPLO60437 1756 aa20.1■□□□□ 0.81
BEST1-206ENST00000529265 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
BEST1-206ENST00000529265 NCKAP5LQ9HCH0 1330 aa20.09■□□□□ 0.81
BEST1-206ENST00000529265 LTKP29376 864 aa20.08■□□□□ 0.8
BEST1-206ENST00000529265 NEXMIFQ5QGS0 1516 aa20.08■□□□□ 0.8
BEST1-206ENST00000529265 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.8
BEST1-206ENST00000529265 BCANQ96GW7 911 aa20.08■□□□□ 0.8
BEST1-206ENST00000529265 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
BEST1-206ENST00000529265 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.8
BEST1-206ENST00000529265 SCAF11Q99590 1463 aaKnown RBP20.07■□□□□ 0.8
BEST1-206ENST00000529265 ZFYVE9O95405 1425 aa20.07■□□□□ 0.8
BEST1-206ENST00000529265 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
BEST1-206ENST00000529265 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
BEST1-206ENST00000529265 IFT172Q9UG01 1749 aa20.06■□□□□ 0.8
BEST1-206ENST00000529265 STRCQ7RTU9 1775 aa20.05■□□□□ 0.8
BEST1-206ENST00000529265 L3MBTL2Q969R5 705 aa20.04■□□□□ 0.8
BEST1-206ENST00000529265 STAC3Q96MF2 364 aa20.01■□□□□ 0.79
BEST1-206ENST00000529265 NPHP4O75161 1426 aaPredicted RBP20.01■□□□□ 0.79
BEST1-206ENST00000529265 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
BEST1-206ENST00000529265 IQGAP1P46940 1657 aa20■□□□□ 0.79
BEST1-206ENST00000529265 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
BEST1-206ENST00000529265 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
BEST1-206ENST00000529265 MED14O60244 1454 aa19.98■□□□□ 0.79
BEST1-206ENST00000529265 MYOM2P54296 1465 aa19.98■□□□□ 0.79
BEST1-206ENST00000529265 TIMELESSQ9UNS1 1208 aa19.97■□□□□ 0.79
BEST1-206ENST00000529265 SLC26A8Q96RN1 970 aa19.95■□□□□ 0.78
BEST1-206ENST00000529265 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
BEST1-206ENST00000529265 PIK3C2GO75747 1445 aa19.92■□□□□ 0.78
BEST1-206ENST00000529265 NRXN3Q9Y4C0 1643 aa19.91■□□□□ 0.78
BEST1-206ENST00000529265 NRXN1Q9ULB1 1477 aa19.91■□□□□ 0.78
BEST1-206ENST00000529265 TBX22Q9Y458 520 aa19.9■□□□□ 0.78
BEST1-206ENST00000529265 ALKQ9UM73 1620 aa19.9■□□□□ 0.78
BEST1-206ENST00000529265 ADAMTS13Q76LX8 1427 aa19.89■□□□□ 0.78
BEST1-206ENST00000529265 PRAG1Q86YV5 1406 aa19.89■□□□□ 0.78
BEST1-206ENST00000529265 CFAP70Q5T0N1 1121 aa19.89■□□□□ 0.77
BEST1-206ENST00000529265 DIP2AQ14689 1571 aa19.89■□□□□ 0.77
BEST1-206ENST00000529265 C14orf93Q9H972 538 aaKnown RBP19.88■□□□□ 0.77
BEST1-206ENST00000529265 LAMC1P11047 1609 aa19.87■□□□□ 0.77
BEST1-206ENST00000529265 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
BEST1-206ENST00000529265 SETD1AO15047 1707 aaKnown RBP19.85■□□□□ 0.77
BEST1-206ENST00000529265 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
BEST1-206ENST00000529265 TMEM132EQ6IEE7 984 aa19.84■□□□□ 0.77
BEST1-206ENST00000529265 METP08581 1390 aa19.83■□□□□ 0.76
BEST1-206ENST00000529265 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
BEST1-206ENST00000529265 TRPM1Q7Z4N2 1603 aa19.82■□□□□ 0.76
BEST1-206ENST00000529265 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
BEST1-206ENST00000529265 NBPF1Q3BBV0 1214 aa19.8■□□□□ 0.76
BEST1-206ENST00000529265 STK26Q9P289 416 aa19.8■□□□□ 0.76
BEST1-206ENST00000529265 ROCK2O75116 1388 aaKnown RBP19.8■□□□□ 0.76
BEST1-206ENST00000529265 ZNF335Q9H4Z2 1342 aaPredicted RBP19.79■□□□□ 0.76
BEST1-206ENST00000529265 KCNA6P17658 529 aa19.79■□□□□ 0.76
BEST1-206ENST00000529265 AMOTL2Q9Y2J4 779 aa19.79■□□□□ 0.76
BEST1-206ENST00000529265 ZEB1P37275 1124 aaPredicted RBP19.77■□□□□ 0.76
BEST1-206ENST00000529265 PTPRUQ92729 1446 aa19.77■□□□□ 0.75
BEST1-206ENST00000529265 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
BEST1-206ENST00000529265 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
BEST1-206ENST00000529265 STRCP1A6NGW2 1772 aa19.76■□□□□ 0.75
BEST1-206ENST00000529265 RALGAPBQ86X10 1494 aa19.75■□□□□ 0.75
BEST1-206ENST00000529265 ADGRB1O14514 1584 aa19.75■□□□□ 0.75
BEST1-206ENST00000529265 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
BEST1-206ENST00000529265 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
BEST1-206ENST00000529265 LRPPRCP42704 1394 aaKnown RBP19.74■□□□□ 0.75
BEST1-206ENST00000529265 NWD1Q149M9 1564 aa19.73■□□□□ 0.75
BEST1-206ENST00000529265 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
BEST1-206ENST00000529265 PROSER2Q86WR7 435 aaPredicted RBP19.72■□□□□ 0.75
BEST1-206ENST00000529265 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
BEST1-206ENST00000529265 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
BEST1-206ENST00000529265 CPS1P31327 1500 aa19.7■□□□□ 0.74
BEST1-206ENST00000529265 POGKQ9P215 609 aa19.69■□□□□ 0.74
BEST1-206ENST00000529265 NKTRP30414 1462 aaKnown RBP19.69■□□□□ 0.74
BEST1-206ENST00000529265 GPRASP1Q5JY77 1395 aa19.69■□□□□ 0.74
BEST1-206ENST00000529265 C14orf37Q86TY3 774 aa19.68■□□□□ 0.74
BEST1-206ENST00000529265 RBM33Q96EV2 1170 aaKnown RBP19.68■□□□□ 0.74
BEST1-206ENST00000529265 ROBO2Q9HCK4 1378 aa19.67■□□□□ 0.74
BEST1-206ENST00000529265 TECPR2O15040 1411 aa19.67■□□□□ 0.74
BEST1-206ENST00000529265 PTCH1Q13635 1447 aa19.67■□□□□ 0.74
BEST1-206ENST00000529265 ARHGEF28Q8N1W1 1705 aaKnown RBP19.67■□□□□ 0.74
BEST1-206ENST00000529265 WAPLQ7Z5K2 1190 aa19.67■□□□□ 0.74
BEST1-206ENST00000529265 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
BEST1-206ENST00000529265 DLC1Q96QB1 1528 aa19.66■□□□□ 0.74
BEST1-206ENST00000529265 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
BEST1-206ENST00000529265 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
BEST1-206ENST00000529265 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
BEST1-206ENST00000529265 SIRT1Q96EB6 747 aa19.65■□□□□ 0.74
BEST1-206ENST00000529265 TMEM94Q12767 1356 aa19.64■□□□□ 0.73
BEST1-206ENST00000529265 LRRC7Q96NW7 1537 aa19.64■□□□□ 0.73
BEST1-206ENST00000529265 FAM135BQ49AJ0 1406 aa19.63■□□□□ 0.73
BEST1-206ENST00000529265 XIRP1Q702N8 1843 aaKnown RBP19.62■□□□□ 0.73
BEST1-206ENST00000529265 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
BEST1-206ENST00000529265 CENPJQ9HC77 1338 aaPredicted RBP19.61■□□□□ 0.73
BEST1-206ENST00000529265 USP47Q96K76 1375 aa19.61■□□□□ 0.73
BEST1-206ENST00000529265 QRICH2Q9H0J4 1663 aa19.59■□□□□ 0.73
BEST1-206ENST00000529265 NCOA3Q9Y6Q9 1424 aa19.58■□□□□ 0.73
BEST1-206ENST00000529265 MINK1Q8N4C8 1332 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms