RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 NISCHQ9Y2I1 1504 aa32.89■■■□□ 2.86
BEST1-206ENST00000529265 CCDC180Q9P1Z9 1646 aa29.08■■■□□ 2.25
BEST1-206ENST00000529265 ABCC9O60706 1549 aa28.13■■■□□ 2.09
BEST1-206ENST00000529265 DCAF8L2P0C7V8 631 aa27.49■■□□□ 1.99
BEST1-206ENST00000529265 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
BEST1-206ENST00000529265 NACADO15069 1562 aa27.24■■□□□ 1.95
BEST1-206ENST00000529265 RB1CC1Q8TDY2 1594 aa27.21■■□□□ 1.95
BEST1-206ENST00000529265 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
BEST1-206ENST00000529265 MYO15BQ96JP2 1530 aa27.15■■□□□ 1.94
BEST1-206ENST00000529265 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
BEST1-206ENST00000529265 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
BEST1-206ENST00000529265 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
BEST1-206ENST00000529265 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
BEST1-206ENST00000529265 BICRAQ9NZM4 1560 aa26.31■■□□□ 1.8
BEST1-206ENST00000529265 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
BEST1-206ENST00000529265 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
BEST1-206ENST00000529265 BAZ1AQ9NRL2 1556 aaPredicted RBP25.49■■□□□ 1.67
BEST1-206ENST00000529265 SMARCA4P51532 1647 aa25.46■■□□□ 1.67
BEST1-206ENST00000529265 CC2D2AQ9P2K1 1620 aa25.44■■□□□ 1.66
BEST1-206ENST00000529265 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
BEST1-206ENST00000529265 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
BEST1-206ENST00000529265 SMARCA2P51531 1590 aa25.21■■□□□ 1.63
BEST1-206ENST00000529265 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
BEST1-206ENST00000529265 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
BEST1-206ENST00000529265 WIZO95785 1651 aa25.15■■□□□ 1.62
BEST1-206ENST00000529265 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
BEST1-206ENST00000529265 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
BEST1-206ENST00000529265 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
BEST1-206ENST00000529265 HMGXB3Q12766 1538 aa25.03■■□□□ 1.6
BEST1-206ENST00000529265 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
BEST1-206ENST00000529265 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
BEST1-206ENST00000529265 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
BEST1-206ENST00000529265 NESP48681 1621 aa24.43■■□□□ 1.5
BEST1-206ENST00000529265 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
BEST1-206ENST00000529265 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
BEST1-206ENST00000529265 CFTRP13569 1480 aa24.34■■□□□ 1.49
BEST1-206ENST00000529265 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
BEST1-206ENST00000529265 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
BEST1-206ENST00000529265 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
BEST1-206ENST00000529265 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
BEST1-206ENST00000529265 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
BEST1-206ENST00000529265 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
BEST1-206ENST00000529265 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
BEST1-206ENST00000529265 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.42
BEST1-206ENST00000529265 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
BEST1-206ENST00000529265 WDR62O43379 1518 aa23.86■■□□□ 1.41
BEST1-206ENST00000529265 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
BEST1-206ENST00000529265 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
BEST1-206ENST00000529265 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
BEST1-206ENST00000529265 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
BEST1-206ENST00000529265 CUX1P39880 1505 aa23.77■■□□□ 1.4
BEST1-206ENST00000529265 CUX2O14529 1486 aa23.77■■□□□ 1.4
BEST1-206ENST00000529265 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
BEST1-206ENST00000529265 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
BEST1-206ENST00000529265 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
BEST1-206ENST00000529265 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
BEST1-206ENST00000529265 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
BEST1-206ENST00000529265 SOGA1O94964 1423 aa23.58■■□□□ 1.36
BEST1-206ENST00000529265 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
BEST1-206ENST00000529265 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
BEST1-206ENST00000529265 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
BEST1-206ENST00000529265 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
BEST1-206ENST00000529265 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
BEST1-206ENST00000529265 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
BEST1-206ENST00000529265 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
BEST1-206ENST00000529265 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
BEST1-206ENST00000529265 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
BEST1-206ENST00000529265 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.33
BEST1-206ENST00000529265 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
BEST1-206ENST00000529265 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
BEST1-206ENST00000529265 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
BEST1-206ENST00000529265 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
BEST1-206ENST00000529265 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
BEST1-206ENST00000529265 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
BEST1-206ENST00000529265 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
BEST1-206ENST00000529265 SNAPC4Q5SXM2 1469 aa23.16■■□□□ 1.3
BEST1-206ENST00000529265 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
BEST1-206ENST00000529265 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
BEST1-206ENST00000529265 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
BEST1-206ENST00000529265 IGF1RP08069 1367 aa23.1■■□□□ 1.29
BEST1-206ENST00000529265 FBLN2P98095 1184 aa23.09■■□□□ 1.29
BEST1-206ENST00000529265 EEA1Q15075 1411 aa23.07■■□□□ 1.28
BEST1-206ENST00000529265 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
BEST1-206ENST00000529265 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
BEST1-206ENST00000529265 CUL7Q14999 1698 aa23.05■■□□□ 1.28
BEST1-206ENST00000529265 CHD1O14646 1710 aa23.04■■□□□ 1.28
BEST1-206ENST00000529265 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
BEST1-206ENST00000529265 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
BEST1-206ENST00000529265 CSRNP3Q8WYN3 585 aa23.02■■□□□ 1.28
BEST1-206ENST00000529265 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
BEST1-206ENST00000529265 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
BEST1-206ENST00000529265 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
BEST1-206ENST00000529265 RAPGEF2Q9Y4G8 1499 aa22.9■■□□□ 1.26
BEST1-206ENST00000529265 PRXQ9BXM0 1461 aa22.87■■□□□ 1.25
BEST1-206ENST00000529265 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
BEST1-206ENST00000529265 KIF21BO75037 1637 aa22.8■■□□□ 1.24
BEST1-206ENST00000529265 CEP170Q5SW79 1584 aa22.79■■□□□ 1.24
BEST1-206ENST00000529265 NUP160Q12769 1436 aa22.78■■□□□ 1.24
BEST1-206ENST00000529265 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
BEST1-206ENST00000529265 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms