RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 FBXO31Q5XUX0 539 aaPredicted RBP10.66□□□□□ -0.7
SOX6-211ENST00000528429 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
SOX6-211ENST00000528429 CAMSAP1Q5T5Y3 1602 aa10.66□□□□□ -0.7
SOX6-211ENST00000528429 SENP3Q9H4L4 574 aaPredicted RBP10.66□□□□□ -0.7
SOX6-211ENST00000528429 ADGRF5Q8IZF2 1346 aa10.65□□□□□ -0.7
SOX6-211ENST00000528429 PDE4CQ08493 712 aa10.65□□□□□ -0.7
SOX6-211ENST00000528429 NUTM2DQ5VT03 806 aaPredicted RBP10.65□□□□□ -0.7
SOX6-211ENST00000528429 ESF1Q9H501 851 aaKnown RBP10.65□□□□□ -0.7
SOX6-211ENST00000528429 TRPM1Q7Z4N2 1603 aa10.65□□□□□ -0.7
SOX6-211ENST00000528429 IDI1Q13907 227 aa10.64□□□□□ -0.71
SOX6-211ENST00000528429 CFAP70Q5T0N1 1121 aa10.64□□□□□ -0.71
SOX6-211ENST00000528429 GPRASP1Q5JY77 1395 aa10.63□□□□□ -0.71
SOX6-211ENST00000528429 STAC3Q96MF2 364 aa10.63□□□□□ -0.71
SOX6-211ENST00000528429 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
SOX6-211ENST00000528429 NOS1P29475 1434 aa10.63□□□□□ -0.71
SOX6-211ENST00000528429 ARHGAP31Q2M1Z3 1444 aa10.63□□□□□ -0.71
SOX6-211ENST00000528429 MADDQ8WXG6 1647 aa10.62□□□□□ -0.71
SOX6-211ENST00000528429 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
SOX6-211ENST00000528429 KIF1BO60333 1816 aa10.62□□□□□ -0.71
SOX6-211ENST00000528429 AGLP35573 1532 aa10.62□□□□□ -0.71
SOX6-211ENST00000528429 SIGLEC1Q9BZZ2 1709 aa10.61□□□□□ -0.71
SOX6-211ENST00000528429 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
SOX6-211ENST00000528429 MROH2AA6NES4 1674 aa10.61□□□□□ -0.71
SOX6-211ENST00000528429 DNAJC5Q9H3Z4 198 aa10.61□□□□□ -0.71
SOX6-211ENST00000528429 SLC52A1Q9NWF4 448 aa10.61□□□□□ -0.71
SOX6-211ENST00000528429 ZC3H13Q5T200 1668 aaKnown RBP10.61□□□□□ -0.71
SOX6-211ENST00000528429 ADGRB3O60242 1522 aa10.61□□□□□ -0.71
SOX6-211ENST00000528429 SYNMO15061 1565 aa10.61□□□□□ -0.71
SOX6-211ENST00000528429 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
SOX6-211ENST00000528429 PPP6R1Q9UPN7 881 aa10.6□□□□□ -0.71
SOX6-211ENST00000528429 TESK2Q96S53 571 aa10.59□□□□□ -0.71
SOX6-211ENST00000528429 MYOM2P54296 1465 aa10.58□□□□□ -0.72
SOX6-211ENST00000528429 TMF1P82094 1093 aa10.58□□□□□ -0.72
SOX6-211ENST00000528429 RPGRIP1LQ68CZ1 1315 aa10.58□□□□□ -0.72
SOX6-211ENST00000528429 DISP3Q9P2K9 1392 aa10.58□□□□□ -0.72
SOX6-211ENST00000528429 ERVK-7P63135 1459 aa10.58□□□□□ -0.72
SOX6-211ENST00000528429 NEURL4Q96JN8 1562 aa10.58□□□□□ -0.72
SOX6-211ENST00000528429 CLTCQ00610 1675 aaKnown RBP10.58□□□□□ -0.72
SOX6-211ENST00000528429 CCER2I3L3R5 266 aa10.57□□□□□ -0.72
SOX6-211ENST00000528429 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
SOX6-211ENST00000528429 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
SOX6-211ENST00000528429 SCAF11Q99590 1463 aaKnown RBP10.57□□□□□ -0.72
SOX6-211ENST00000528429 PRKRIP1Q9H875 184 aaPredicted RBP10.56□□□□□ -0.72
SOX6-211ENST00000528429 PREX1Q8TCU6 1659 aa10.56□□□□□ -0.72
SOX6-211ENST00000528429 ZMYM3Q14202 1370 aa10.56□□□□□ -0.72
SOX6-211ENST00000528429 TRAK1Q9UPV9 953 aa10.56□□□□□ -0.72
SOX6-211ENST00000528429 PIK3C2BO00750 1634 aa10.55□□□□□ -0.72
SOX6-211ENST00000528429 LAMC1P11047 1609 aa10.55□□□□□ -0.72
SOX6-211ENST00000528429 EIF3AQ14152 1382 aaKnown RBP10.55□□□□□ -0.72
SOX6-211ENST00000528429 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
SOX6-211ENST00000528429 POLR1AO95602 1720 aaPredicted RBP10.55□□□□□ -0.72
SOX6-211ENST00000528429 C14orf93Q9H972 538 aaKnown RBP10.54□□□□□ -0.72
SOX6-211ENST00000528429 PIK3C2GO75747 1445 aa10.54□□□□□ -0.72
SOX6-211ENST00000528429 NRXN1Q9ULB1 1477 aa10.54□□□□□ -0.72
SOX6-211ENST00000528429 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
SOX6-211ENST00000528429 IFT172Q9UG01 1749 aa10.53□□□□□ -0.72
SOX6-211ENST00000528429 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
SOX6-211ENST00000528429 PPLO60437 1756 aa10.52□□□□□ -0.72
SOX6-211ENST00000528429 CCDC184Q52MB2 194 aa10.52□□□□□ -0.72
SOX6-211ENST00000528429 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.72
SOX6-211ENST00000528429 NEXMIFQ5QGS0 1516 aa10.52□□□□□ -0.73
SOX6-211ENST00000528429 STK26Q9P289 416 aa10.52□□□□□ -0.73
SOX6-211ENST00000528429 NEFLP07196 543 aa10.51□□□□□ -0.73
SOX6-211ENST00000528429 NPM2Q86SE8 214 aaKnown RBP10.51□□□□□ -0.73
SOX6-211ENST00000528429 MRS2Q9HD23 443 aa10.51□□□□□ -0.73
SOX6-211ENST00000528429 IQGAP1P46940 1657 aa10.51□□□□□ -0.73
SOX6-211ENST00000528429 SAFB2Q14151 953 aaKnown RBP eCLIP10.51□□□□□ -0.73
SOX6-211ENST00000528429 PANK3Q9H999 370 aa10.51□□□□□ -0.73
SOX6-211ENST00000528429 TMEM131LA2VDJ0 1609 aa10.51□□□□□ -0.73
SOX6-211ENST00000528429 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
SOX6-211ENST00000528429 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
SOX6-211ENST00000528429 TNRQ92752 1358 aa10.5□□□□□ -0.73
SOX6-211ENST00000528429 CDCA8Q53HL2 280 aa10.5□□□□□ -0.73
SOX6-211ENST00000528429 SPATA31D1Q6ZQQ2 1576 aa10.5□□□□□ -0.73
SOX6-211ENST00000528429 MYO5BQ9ULV0 1848 aa10.5□□□□□ -0.73
SOX6-211ENST00000528429 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
SOX6-211ENST00000528429 FAM9BQ8IZU0 186 aa10.49□□□□□ -0.73
SOX6-211ENST00000528429 BCANQ96GW7 911 aa10.49□□□□□ -0.73
SOX6-211ENST00000528429 SALL2Q9Y467 1007 aaPredicted RBP10.49□□□□□ -0.73
SOX6-211ENST00000528429 A2ML1A8K2U0 1454 aa10.49□□□□□ -0.73
SOX6-211ENST00000528429 CC2D1BQ5T0F9 858 aaKnown RBP10.48□□□□□ -0.73
SOX6-211ENST00000528429 RIMS2Q9UQ26 1411 aa10.47□□□□□ -0.73
SOX6-211ENST00000528429 ADGRB1O14514 1584 aa10.47□□□□□ -0.73
SOX6-211ENST00000528429 ZFYVE9O95405 1425 aa10.47□□□□□ -0.73
SOX6-211ENST00000528429 HAP1P54257 671 aaPredicted RBP10.47□□□□□ -0.73
SOX6-211ENST00000528429 SETBP1Q9Y6X0 1596 aa10.46□□□□□ -0.73
SOX6-211ENST00000528429 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
SOX6-211ENST00000528429 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
SOX6-211ENST00000528429 HNRNPUQ00839 825 aaKnown RBP eCLIP10.46□□□□□ -0.74
SOX6-211ENST00000528429 PER1O15534 1290 aaPredicted RBP10.45□□□□□ -0.74
SOX6-211ENST00000528429 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
SOX6-211ENST00000528429 TMC1Q8TDI8 760 aa10.45□□□□□ -0.74
SOX6-211ENST00000528429 KNSTRNQ9Y448 316 aa10.45□□□□□ -0.74
SOX6-211ENST00000528429 POGKQ9P215 609 aa10.44□□□□□ -0.74
SOX6-211ENST00000528429 TPRNQ4KMQ1 711 aa10.44□□□□□ -0.74
SOX6-211ENST00000528429 PRAM1Q96QH2 718 aa10.44□□□□□ -0.74
SOX6-211ENST00000528429 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.43□□□□□ -0.74
SOX6-211ENST00000528429 RALBP1Q15311 655 aa10.43□□□□□ -0.74
SOX6-211ENST00000528429 SBNO2Q9Y2G9 1366 aa10.43□□□□□ -0.74
SOX6-211ENST00000528429 MINK1Q8N4C8 1332 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms