RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 KANK1Q14678 1352 aa11.72□□□□□ -0.53
SORL1-207ENST00000528339 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
SORL1-207ENST00000528339 TECPR2O15040 1411 aa11.71□□□□□ -0.54
SORL1-207ENST00000528339 USP32Q8NFA0 1604 aa11.7□□□□□ -0.54
SORL1-207ENST00000528339 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
SORL1-207ENST00000528339 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
SORL1-207ENST00000528339 MARF1Q9Y4F3 1742 aaKnown RBP11.68□□□□□ -0.54
SORL1-207ENST00000528339 NRKQ7Z2Y5 1582 aa11.68□□□□□ -0.54
SORL1-207ENST00000528339 PKD2Q13563 968 aa11.68□□□□□ -0.54
SORL1-207ENST00000528339 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
SORL1-207ENST00000528339 KIF3BO15066 747 aa11.67□□□□□ -0.54
SORL1-207ENST00000528339 STAC3Q96MF2 364 aa11.66□□□□□ -0.54
SORL1-207ENST00000528339 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
SORL1-207ENST00000528339 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
SORL1-207ENST00000528339 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
SORL1-207ENST00000528339 ADAMTS13Q76LX8 1427 aa11.65□□□□□ -0.54
SORL1-207ENST00000528339 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
SORL1-207ENST00000528339 ITGAEP38570 1179 aa11.63□□□□□ -0.55
SORL1-207ENST00000528339 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
SORL1-207ENST00000528339 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
SORL1-207ENST00000528339 RPGRIP1LQ68CZ1 1315 aa11.63□□□□□ -0.55
SORL1-207ENST00000528339 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
SORL1-207ENST00000528339 TNRQ92752 1358 aa11.62□□□□□ -0.55
SORL1-207ENST00000528339 SBNO2Q9Y2G9 1366 aa11.62□□□□□ -0.55
SORL1-207ENST00000528339 CRYBG1Q9Y4K1 1723 aa11.61□□□□□ -0.55
SORL1-207ENST00000528339 ZEB1P37275 1124 aaPredicted RBP11.61□□□□□ -0.55
SORL1-207ENST00000528339 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
SORL1-207ENST00000528339 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
SORL1-207ENST00000528339 PLEKHG1Q9ULL1 1385 aa11.59□□□□□ -0.55
SORL1-207ENST00000528339 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
SORL1-207ENST00000528339 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
SORL1-207ENST00000528339 FOXD1Q16676 465 aa11.59□□□□□ -0.55
SORL1-207ENST00000528339 NBPF8Q3BBV2 869 aa11.59□□□□□ -0.55
SORL1-207ENST00000528339 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.56
SORL1-207ENST00000528339 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
SORL1-207ENST00000528339 KDM4FA0A1W2PPD8 638 aa11.57□□□□□ -0.56
SORL1-207ENST00000528339 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
SORL1-207ENST00000528339 SCAF11Q99590 1463 aaKnown RBP11.56□□□□□ -0.56
SORL1-207ENST00000528339 L3MBTL2Q969R5 705 aa11.56□□□□□ -0.56
SORL1-207ENST00000528339 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
SORL1-207ENST00000528339 CDC42BPGQ6DT37 1551 aa11.55□□□□□ -0.56
SORL1-207ENST00000528339 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
SORL1-207ENST00000528339 PTPRUQ92729 1446 aa11.54□□□□□ -0.56
SORL1-207ENST00000528339 IDI1Q13907 227 aa11.53□□□□□ -0.56
SORL1-207ENST00000528339 TRPM3Q9HCF6 1732 aaPredicted RBP11.53□□□□□ -0.56
SORL1-207ENST00000528339 FAM135BQ49AJ0 1406 aa11.53□□□□□ -0.56
SORL1-207ENST00000528339 RGPD8O14715 1765 aaPredicted RBP11.53□□□□□ -0.56
SORL1-207ENST00000528339 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
SORL1-207ENST00000528339 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.56
SORL1-207ENST00000528339 PIK3R4Q99570 1358 aa11.52□□□□□ -0.57
SORL1-207ENST00000528339 FBXO31Q5XUX0 539 aaPredicted RBP11.51□□□□□ -0.57
SORL1-207ENST00000528339 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
SORL1-207ENST00000528339 LTBP4Q8N2S1 1624 aa11.5□□□□□ -0.57
SORL1-207ENST00000528339 NKTRP30414 1462 aaKnown RBP11.5□□□□□ -0.57
SORL1-207ENST00000528339 C14orf93Q9H972 538 aaKnown RBP11.49□□□□□ -0.57
SORL1-207ENST00000528339 AEBP2Q6ZN18 517 aaPredicted RBP11.49□□□□□ -0.57
SORL1-207ENST00000528339 CD163L1Q9NR16 1453 aa11.48□□□□□ -0.57
SORL1-207ENST00000528339 CCER1Q8TC90 406 aaPredicted RBP11.48□□□□□ -0.57
SORL1-207ENST00000528339 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
SORL1-207ENST00000528339 MST1RQ04912 1400 aa11.48□□□□□ -0.57
SORL1-207ENST00000528339 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
SORL1-207ENST00000528339 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
SORL1-207ENST00000528339 TONSLQ96HA7 1378 aa11.47□□□□□ -0.57
SORL1-207ENST00000528339 GGT6Q6P531 493 aa11.47□□□□□ -0.57
SORL1-207ENST00000528339 ABCA3Q99758 1704 aa11.47□□□□□ -0.57
SORL1-207ENST00000528339 ABCC11Q96J66 1382 aa11.46□□□□□ -0.57
SORL1-207ENST00000528339 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.57
SORL1-207ENST00000528339 ALS2Q96Q42 1657 aa11.46□□□□□ -0.57
SORL1-207ENST00000528339 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.58
SORL1-207ENST00000528339 YTHDC2Q9H6S0 1430 aaKnown RBP11.46□□□□□ -0.58
SORL1-207ENST00000528339 TESK2Q96S53 571 aa11.46□□□□□ -0.58
SORL1-207ENST00000528339 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
SORL1-207ENST00000528339 SHPRHQ149N8 1683 aa11.45□□□□□ -0.58
SORL1-207ENST00000528339 NCOA3Q9Y6Q9 1424 aa11.45□□□□□ -0.58
SORL1-207ENST00000528339 ARID4BQ4LE39 1312 aaPredicted RBP11.44□□□□□ -0.58
SORL1-207ENST00000528339 METP08581 1390 aa11.42□□□□□ -0.58
SORL1-207ENST00000528339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.42□□□□□ -0.581e-7■□□□□ 10.1
SORL1-207ENST00000528339 CAMTA1Q9Y6Y1 1673 aa11.42□□□□□ -0.58
SORL1-207ENST00000528339 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
SORL1-207ENST00000528339 USP47Q96K76 1375 aa11.4□□□□□ -0.58
SORL1-207ENST00000528339 ATP7BP35670 1465 aa11.4□□□□□ -0.58
SORL1-207ENST00000528339 PIK3C2AO00443 1686 aa11.4□□□□□ -0.58
SORL1-207ENST00000528339 NPHP4O75161 1426 aaPredicted RBP11.4□□□□□ -0.58
SORL1-207ENST00000528339 LTKP29376 864 aa11.39□□□□□ -0.59
SORL1-207ENST00000528339 COL22A1Q8NFW1 1626 aaPredicted RBP11.39□□□□□ -0.59
SORL1-207ENST00000528339 RGPD1P0DJD0 1748 aa11.39□□□□□ -0.59
SORL1-207ENST00000528339 IQSEC2Q5JU85 1478 aa11.39□□□□□ -0.59
SORL1-207ENST00000528339 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
SORL1-207ENST00000528339 MED1Q15648 1581 aaPredicted RBP11.38□□□□□ -0.59
SORL1-207ENST00000528339 DCCP43146 1447 aa11.38□□□□□ -0.59
SORL1-207ENST00000528339 DISP3Q9P2K9 1392 aa11.36□□□□□ -0.59
SORL1-207ENST00000528339 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
SORL1-207ENST00000528339 LMO7Q8WWI1 1683 aa11.35□□□□□ -0.59
SORL1-207ENST00000528339 CEBPAP49715 358 aaPredicted RBP11.35□□□□□ -0.59
SORL1-207ENST00000528339 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
SORL1-207ENST00000528339 CPSF1Q10570 1443 aaKnown RBP11.35□□□□□ -0.59
SORL1-207ENST00000528339 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.35□□□□□ -0.59
SORL1-207ENST00000528339 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
SORL1-207ENST00000528339 TBX22Q9Y458 520 aa11.34□□□□□ -0.59
SORL1-207ENST00000528339 ROBO2Q9HCK4 1378 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms