RNA–Protein interactions for RNA: ENST00000528099.5

C11orf54-206, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C11orf54, Length 1,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-206ENST00000528099 MAGI2Q86UL8 1455 aa10.8□□□□□ -0.68
C11orf54-206ENST00000528099 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
C11orf54-206ENST00000528099 KIF3CO14782 793 aa10.79□□□□□ -0.68
C11orf54-206ENST00000528099 CARMIL1Q5VZK9 1371 aa10.79□□□□□ -0.68
C11orf54-206ENST00000528099 ARSIQ5FYB1 569 aa10.78□□□□□ -0.68
C11orf54-206ENST00000528099 RTN4Q9NQC3 1192 aaKnown RBP10.76□□□□□ -0.69
C11orf54-206ENST00000528099 KIF27Q86VH2 1401 aa10.76□□□□□ -0.69
C11orf54-206ENST00000528099 GPR153Q6NV75 609 aa10.76□□□□□ -0.69
C11orf54-206ENST00000528099 CAMSAP1Q5T5Y3 1602 aa10.76□□□□□ -0.69
C11orf54-206ENST00000528099 POTEAQ6S8J7 498 aa10.75□□□□□ -0.69
C11orf54-206ENST00000528099 C3P01024 1663 aa10.75□□□□□ -0.69
C11orf54-206ENST00000528099 TRAPPC8Q9Y2L5 1435 aa10.74□□□□□ -0.69
C11orf54-206ENST00000528099 POTEB3A0JP26 581 aa10.74□□□□□ -0.69
C11orf54-206ENST00000528099 POTEBQ6S5H4 581 aa10.74□□□□□ -0.69
C11orf54-206ENST00000528099 SETD1AO15047 1707 aaKnown RBP10.74□□□□□ -0.69
C11orf54-206ENST00000528099 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
C11orf54-206ENST00000528099 VARS2Q5ST30 1063 aaKnown RBP10.73□□□□□ -0.69
C11orf54-206ENST00000528099 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.699e-10■■■■□ 24.3
C11orf54-206ENST00000528099 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
C11orf54-206ENST00000528099 ATP10AO60312 1499 aa10.72□□□□□ -0.69
C11orf54-206ENST00000528099 ATP10BO94823 1461 aa10.72□□□□□ -0.69
C11orf54-206ENST00000528099 C9orf84Q5VXU9 1444 aa10.72□□□□□ -0.69
C11orf54-206ENST00000528099 NCKAP5LQ9HCH0 1330 aa10.72□□□□□ -0.69
C11orf54-206ENST00000528099 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
C11orf54-206ENST00000528099 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
C11orf54-206ENST00000528099 CFAP74Q9C0B2 1584 aa10.71□□□□□ -0.69
C11orf54-206ENST00000528099 CPS1P31327 1500 aa10.71□□□□□ -0.7
C11orf54-206ENST00000528099 UPF1Q92900 1129 aaKnown RBP eCLIP10.7□□□□□ -0.7
C11orf54-206ENST00000528099 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
C11orf54-206ENST00000528099 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
C11orf54-206ENST00000528099 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
C11orf54-206ENST00000528099 PLA2R1Q13018 1463 aa10.69□□□□□ -0.7
C11orf54-206ENST00000528099 NUDT7P0C024 238 aa10.68□□□□□ -0.7
C11orf54-206ENST00000528099 FOXK1P85037 733 aa10.68□□□□□ -0.7
C11orf54-206ENST00000528099 DSG2Q14126 1118 aa10.68□□□□□ -0.7
C11orf54-206ENST00000528099 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
C11orf54-206ENST00000528099 TCOF1Q13428 1488 aaKnown RBP10.67□□□□□ -0.7
C11orf54-206ENST00000528099 SLC34A2O95436 690 aa10.66□□□□□ -0.7
C11orf54-206ENST00000528099 GOLGA3Q08378 1498 aa10.66□□□□□ -0.7
C11orf54-206ENST00000528099 RAPGEF2Q9Y4G8 1499 aa10.65□□□□□ -0.7
C11orf54-206ENST00000528099 PDE4AP27815 886 aa10.65□□□□□ -0.7
C11orf54-206ENST00000528099 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-206ENST00000528099 BBXQ8WY36 941 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-206ENST00000528099 ARID3CA6NKF2 412 aa10.64□□□□□ -0.71
C11orf54-206ENST00000528099 NPATQ14207 1427 aa10.63□□□□□ -0.71
C11orf54-206ENST00000528099 TBC1D12O60347 775 aa10.62□□□□□ -0.71
C11orf54-206ENST00000528099 KRTAP3-3Q9BYR6 98 aa10.62□□□□□ -0.71
C11orf54-206ENST00000528099 KRTAP3-2Q9BYR7 98 aa10.62□□□□□ -0.71
C11orf54-206ENST00000528099 SHANK2Q9UPX8 1470 aa10.62□□□□□ -0.71
C11orf54-206ENST00000528099 ZNF142P52746 1687 aaPredicted RBP10.61□□□□□ -0.71
C11orf54-206ENST00000528099 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
C11orf54-206ENST00000528099 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
C11orf54-206ENST00000528099 LARP6Q9BRS8 491 aaKnown RBP10.61□□□□□ -0.71
C11orf54-206ENST00000528099 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
C11orf54-206ENST00000528099 AGLP35573 1532 aa10.6□□□□□ -0.71
C11orf54-206ENST00000528099 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
C11orf54-206ENST00000528099 CRISPLD2Q9H0B8 497 aa10.6□□□□□ -0.71
C11orf54-206ENST00000528099 LHX6Q9UPM6 363 aa10.6□□□□□ -0.71
C11orf54-206ENST00000528099 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
C11orf54-206ENST00000528099 SUPT6HQ7KZ85 1726 aaKnown RBP10.6□□□□□ -0.71
C11orf54-206ENST00000528099 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
C11orf54-206ENST00000528099 SCAPERQ9BY12 1400 aa10.59□□□□□ -0.71
C11orf54-206ENST00000528099 CNTLNQ9NXG0 1405 aa10.59□□□□□ -0.71
C11orf54-206ENST00000528099 ESF1Q9H501 851 aaKnown RBP10.58□□□□□ -0.72
C11orf54-206ENST00000528099 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
C11orf54-206ENST00000528099 SPRYD3Q8NCJ5 442 aa10.56□□□□□ -0.72
C11orf54-206ENST00000528099 CEP170BQ9Y4F5 1589 aaPredicted RBP10.56□□□□□ -0.72
C11orf54-206ENST00000528099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.56□□□□□ -0.72
C11orf54-206ENST00000528099 MROH2AA6NES4 1674 aa10.55□□□□□ -0.72
C11orf54-206ENST00000528099 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
C11orf54-206ENST00000528099 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
C11orf54-206ENST00000528099 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
C11orf54-206ENST00000528099 FAM9AQ8IZU1 332 aaPredicted RBP10.55□□□□□ -0.72
C11orf54-206ENST00000528099 VWDEQ8N2E2 1590 aa10.54□□□□□ -0.72
C11orf54-206ENST00000528099 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
C11orf54-206ENST00000528099 RNF17Q9BXT8 1623 aaKnown RBP10.54□□□□□ -0.72
C11orf54-206ENST00000528099 DIP2CQ9Y2E4 1556 aa10.54□□□□□ -0.72
C11orf54-206ENST00000528099 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
C11orf54-206ENST00000528099 ANKRD13DQ6ZTN6 518 aa10.53□□□□□ -0.72
C11orf54-206ENST00000528099 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
C11orf54-206ENST00000528099 NEURL4Q96JN8 1562 aa10.52□□□□□ -0.73
C11orf54-206ENST00000528099 POLR1AO95602 1720 aaPredicted RBP10.51□□□□□ -0.73
C11orf54-206ENST00000528099 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
C11orf54-206ENST00000528099 KDM5CP41229 1560 aa10.51□□□□□ -0.73
C11orf54-206ENST00000528099 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
C11orf54-206ENST00000528099 RAPGEF6Q8TEU7 1601 aa10.51□□□□□ -0.73
C11orf54-206ENST00000528099 LRRC7Q96NW7 1537 aa10.5□□□□□ -0.73
C11orf54-206ENST00000528099 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
C11orf54-206ENST00000528099 ZMYM3Q14202 1370 aa10.5□□□□□ -0.73
C11orf54-206ENST00000528099 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
C11orf54-206ENST00000528099 PLEKHD1A6NEE1 506 aa10.49□□□□□ -0.73
C11orf54-206ENST00000528099 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
C11orf54-206ENST00000528099 PLCH2O75038 1416 aa10.48□□□□□ -0.73
C11orf54-206ENST00000528099 ABCA6Q8N139 1617 aa10.47□□□□□ -0.73
C11orf54-206ENST00000528099 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
C11orf54-206ENST00000528099 DNMT1P26358 1616 aaKnown RBP10.47□□□□□ -0.73
C11orf54-206ENST00000528099 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
C11orf54-206ENST00000528099 SYNMO15061 1565 aa10.46□□□□□ -0.73
C11orf54-206ENST00000528099 NUP153P49790 1475 aaKnown RBP10.46□□□□□ -0.73
C11orf54-206ENST00000528099 FAM135BQ49AJ0 1406 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms