RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 RIMS2Q9UQ26 1411 aa16.09■□□□□ 0.17
SYVN1-208ENST00000527142 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.16
SYVN1-208ENST00000527142 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
SYVN1-208ENST00000527142 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
SYVN1-208ENST00000527142 CLTCL1P53675 1640 aa16.05■□□□□ 0.16
SYVN1-208ENST00000527142 MYO5BQ9ULV0 1848 aa16.05■□□□□ 0.16
SYVN1-208ENST00000527142 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
SYVN1-208ENST00000527142 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
SYVN1-208ENST00000527142 RAB3GAP2Q9H2M9 1393 aa16.03■□□□□ 0.16
SYVN1-208ENST00000527142 DIP2AQ14689 1571 aa16.01■□□□□ 0.15
SYVN1-208ENST00000527142 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
SYVN1-208ENST00000527142 MPHOSPH9Q99550 1183 aa16■□□□□ 0.15
SYVN1-208ENST00000527142 NWD1Q149M9 1564 aa16■□□□□ 0.15
SYVN1-208ENST00000527142 NKTRP30414 1462 aaKnown RBP15.99■□□□□ 0.15
SYVN1-208ENST00000527142 STRCP1A6NGW2 1772 aa15.99■□□□□ 0.15
SYVN1-208ENST00000527142 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
SYVN1-208ENST00000527142 HRCP23327 699 aa15.98■□□□□ 0.15
SYVN1-208ENST00000527142 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
SYVN1-208ENST00000527142 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
SYVN1-208ENST00000527142 ADAMTS13Q76LX8 1427 aa15.97■□□□□ 0.15
SYVN1-208ENST00000527142 KIF1BO60333 1816 aa15.97■□□□□ 0.15
SYVN1-208ENST00000527142 NEXMIFQ5QGS0 1516 aa15.97■□□□□ 0.15
SYVN1-208ENST00000527142 KCNA6P17658 529 aa15.96■□□□□ 0.15
SYVN1-208ENST00000527142 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.15
SYVN1-208ENST00000527142 BCANQ96GW7 911 aa15.96■□□□□ 0.15
SYVN1-208ENST00000527142 TBX22Q9Y458 520 aa15.96■□□□□ 0.15
SYVN1-208ENST00000527142 PIK3R4Q99570 1358 aa15.96■□□□□ 0.15
SYVN1-208ENST00000527142 UBAP1LF5GYI3 381 aa15.95■□□□□ 0.14
SYVN1-208ENST00000527142 RPGRIP1LQ68CZ1 1315 aa15.94■□□□□ 0.14
SYVN1-208ENST00000527142 FOXD1Q16676 465 aa15.94■□□□□ 0.14
SYVN1-208ENST00000527142 SPATA31E1Q6ZUB1 1445 aa15.93■□□□□ 0.14
SYVN1-208ENST00000527142 NUTM2DQ5VT03 806 aaPredicted RBP15.92■□□□□ 0.14
SYVN1-208ENST00000527142 NRXN3Q9Y4C0 1643 aa15.92■□□□□ 0.14
SYVN1-208ENST00000527142 TOM1O60784 492 aa15.91■□□□□ 0.14
SYVN1-208ENST00000527142 TMEM94Q12767 1356 aa15.9■□□□□ 0.14
SYVN1-208ENST00000527142 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
SYVN1-208ENST00000527142 ALKQ9UM73 1620 aa15.89■□□□□ 0.13
SYVN1-208ENST00000527142 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
SYVN1-208ENST00000527142 NCOA3Q9Y6Q9 1424 aa15.88■□□□□ 0.13
SYVN1-208ENST00000527142 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
SYVN1-208ENST00000527142 PROSER2Q86WR7 435 aaPredicted RBP15.87■□□□□ 0.13
SYVN1-208ENST00000527142 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
SYVN1-208ENST00000527142 PPLO60437 1756 aa15.87■□□□□ 0.13
SYVN1-208ENST00000527142 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
SYVN1-208ENST00000527142 XIRP1Q702N8 1843 aaKnown RBP15.86■□□□□ 0.13
SYVN1-208ENST00000527142 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
SYVN1-208ENST00000527142 METP08581 1390 aa15.84■□□□□ 0.13
SYVN1-208ENST00000527142 PRAG1Q86YV5 1406 aa15.84■□□□□ 0.13
SYVN1-208ENST00000527142 MSH6P52701 1360 aa15.83■□□□□ 0.12
SYVN1-208ENST00000527142 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
SYVN1-208ENST00000527142 AMOTL2Q9Y2J4 779 aa15.82■□□□□ 0.12
SYVN1-208ENST00000527142 MYOM2P54296 1465 aa15.82■□□□□ 0.12
SYVN1-208ENST00000527142 SETD1AO15047 1707 aaKnown RBP15.81■□□□□ 0.12
SYVN1-208ENST00000527142 PIP4K2BP78356 416 aa15.81■□□□□ 0.12
SYVN1-208ENST00000527142 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
SYVN1-208ENST00000527142 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
SYVN1-208ENST00000527142 PIK3C2GO75747 1445 aa15.8■□□□□ 0.12
SYVN1-208ENST00000527142 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
SYVN1-208ENST00000527142 NRXN1Q9ULB1 1477 aa15.79■□□□□ 0.12
SYVN1-208ENST00000527142 DCCP43146 1447 aa15.79■□□□□ 0.12
SYVN1-208ENST00000527142 ADGRF5Q8IZF2 1346 aa15.78■□□□□ 0.12
SYVN1-208ENST00000527142 MED1Q15648 1581 aaPredicted RBP15.78■□□□□ 0.12
SYVN1-208ENST00000527142 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.12
SYVN1-208ENST00000527142 RBM33Q96EV2 1170 aaKnown RBP15.77■□□□□ 0.12
SYVN1-208ENST00000527142 C14orf37Q86TY3 774 aa15.76■□□□□ 0.11
SYVN1-208ENST00000527142 C19orf44Q9H6X5 657 aa15.76■□□□□ 0.11
SYVN1-208ENST00000527142 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
SYVN1-208ENST00000527142 HSPA1LP34931 641 aa15.75■□□□□ 0.11
SYVN1-208ENST00000527142 LAMC1P11047 1609 aa15.75■□□□□ 0.11
SYVN1-208ENST00000527142 CADPS2Q86UW7 1296 aa15.74■□□□□ 0.11
SYVN1-208ENST00000527142 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
SYVN1-208ENST00000527142 TECPR2O15040 1411 aa15.74■□□□□ 0.11
SYVN1-208ENST00000527142 ROBO2Q9HCK4 1378 aa15.73■□□□□ 0.11
SYVN1-208ENST00000527142 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
SYVN1-208ENST00000527142 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.72■□□□□ 0.11
SYVN1-208ENST00000527142 ATF3P18847 181 aa15.72■□□□□ 0.11
SYVN1-208ENST00000527142 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
SYVN1-208ENST00000527142 SLAIN2Q9P270 581 aa15.72■□□□□ 0.11
SYVN1-208ENST00000527142 LRPPRCP42704 1394 aaKnown RBP15.72■□□□□ 0.11
SYVN1-208ENST00000527142 ROBO1Q9Y6N7 1651 aa15.71■□□□□ 0.11
SYVN1-208ENST00000527142 ABCC11Q96J66 1382 aa15.7■□□□□ 0.1
SYVN1-208ENST00000527142 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
SYVN1-208ENST00000527142 C14orf93Q9H972 538 aaKnown RBP15.69■□□□□ 0.1
SYVN1-208ENST00000527142 YTHDC2Q9H6S0 1430 aaKnown RBP15.68■□□□□ 0.1
SYVN1-208ENST00000527142 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
SYVN1-208ENST00000527142 DHX57Q6P158 1386 aaKnown RBP15.67■□□□□ 0.1
SYVN1-208ENST00000527142 MST1RQ04912 1400 aa15.67■□□□□ 0.1
SYVN1-208ENST00000527142 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
SYVN1-208ENST00000527142 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
SYVN1-208ENST00000527142 ADGRB1O14514 1584 aa15.65■□□□□ 0.1
SYVN1-208ENST00000527142 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
SYVN1-208ENST00000527142 CFAP70Q5T0N1 1121 aa15.64■□□□□ 0.09
SYVN1-208ENST00000527142 SIRT1Q96EB6 747 aa15.64■□□□□ 0.09
SYVN1-208ENST00000527142 DLC1Q96QB1 1528 aa15.63■□□□□ 0.09
SYVN1-208ENST00000527142 TMEM132EQ6IEE7 984 aa15.63■□□□□ 0.09
SYVN1-208ENST00000527142 STK26Q9P289 416 aa15.62■□□□□ 0.09
SYVN1-208ENST00000527142 BRINP3Q76B58 766 aa15.61■□□□□ 0.09
SYVN1-208ENST00000527142 C1orf167Q5SNV9 1468 aa15.6■□□□□ 0.09
SYVN1-208ENST00000527142 KDM2AQ9Y2K7 1162 aa15.6■□□□□ 0.09
SYVN1-208ENST00000527142 COL16A1Q07092 1604 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms