RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
SYVN1-208ENST00000527142 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
SYVN1-208ENST00000527142 ABCC9O60706 1549 aa22.98■■□□□ 1.27
SYVN1-208ENST00000527142 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
SYVN1-208ENST00000527142 NACADO15069 1562 aa22.12■■□□□ 1.13
SYVN1-208ENST00000527142 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
SYVN1-208ENST00000527142 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
SYVN1-208ENST00000527142 DCAF8L2P0C7V8 631 aa21.9■■□□□ 1.1
SYVN1-208ENST00000527142 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
SYVN1-208ENST00000527142 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
SYVN1-208ENST00000527142 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
SYVN1-208ENST00000527142 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
SYVN1-208ENST00000527142 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
SYVN1-208ENST00000527142 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
SYVN1-208ENST00000527142 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
SYVN1-208ENST00000527142 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
SYVN1-208ENST00000527142 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
SYVN1-208ENST00000527142 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
SYVN1-208ENST00000527142 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
SYVN1-208ENST00000527142 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
SYVN1-208ENST00000527142 DNAJC5Q9H3Z4 198 aa20.44■□□□□ 0.86
SYVN1-208ENST00000527142 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
SYVN1-208ENST00000527142 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
SYVN1-208ENST00000527142 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
SYVN1-208ENST00000527142 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
SYVN1-208ENST00000527142 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
SYVN1-208ENST00000527142 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
SYVN1-208ENST00000527142 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
SYVN1-208ENST00000527142 RSF1Q96T23 1441 aaPredicted RBP20.03■□□□□ 0.8
SYVN1-208ENST00000527142 WIZO95785 1651 aa20.01■□□□□ 0.79
SYVN1-208ENST00000527142 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
SYVN1-208ENST00000527142 LAMC3Q9Y6N6 1575 aa19.87■□□□□ 0.77
SYVN1-208ENST00000527142 NESP48681 1621 aa19.86■□□□□ 0.77
SYVN1-208ENST00000527142 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
SYVN1-208ENST00000527142 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
SYVN1-208ENST00000527142 PDS5BQ9NTI5 1447 aa19.75■□□□□ 0.75
SYVN1-208ENST00000527142 CUX2O14529 1486 aa19.73■□□□□ 0.75
SYVN1-208ENST00000527142 CFTRP13569 1480 aa19.67■□□□□ 0.74
SYVN1-208ENST00000527142 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
SYVN1-208ENST00000527142 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
SYVN1-208ENST00000527142 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
SYVN1-208ENST00000527142 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
SYVN1-208ENST00000527142 CEP164Q9UPV0 1460 aa19.55■□□□□ 0.72
SYVN1-208ENST00000527142 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
SYVN1-208ENST00000527142 WDR62O43379 1518 aa19.49■□□□□ 0.71
SYVN1-208ENST00000527142 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
SYVN1-208ENST00000527142 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
SYVN1-208ENST00000527142 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
SYVN1-208ENST00000527142 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
SYVN1-208ENST00000527142 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
SYVN1-208ENST00000527142 DNMBPQ6XZF7 1577 aa19.22■□□□□ 0.67
SYVN1-208ENST00000527142 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
SYVN1-208ENST00000527142 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
SYVN1-208ENST00000527142 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
SYVN1-208ENST00000527142 CUX1P39880 1505 aa19.05■□□□□ 0.64
SYVN1-208ENST00000527142 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.64
SYVN1-208ENST00000527142 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
SYVN1-208ENST00000527142 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
SYVN1-208ENST00000527142 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
SYVN1-208ENST00000527142 SOGA1O94964 1423 aa18.95■□□□□ 0.62
SYVN1-208ENST00000527142 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
SYVN1-208ENST00000527142 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
SYVN1-208ENST00000527142 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
SYVN1-208ENST00000527142 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.612e-9■■■■□ 22.2
SYVN1-208ENST00000527142 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
SYVN1-208ENST00000527142 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
SYVN1-208ENST00000527142 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
SYVN1-208ENST00000527142 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
SYVN1-208ENST00000527142 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
SYVN1-208ENST00000527142 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
SYVN1-208ENST00000527142 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
SYVN1-208ENST00000527142 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.59
SYVN1-208ENST00000527142 ABCA5Q8WWZ7 1642 aa18.76■□□□□ 0.59
SYVN1-208ENST00000527142 GAPVD1Q14C86 1478 aa18.76■□□□□ 0.59
SYVN1-208ENST00000527142 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
SYVN1-208ENST00000527142 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
SYVN1-208ENST00000527142 CHD1O14646 1710 aa18.69■□□□□ 0.58
SYVN1-208ENST00000527142 SYNJ2O15056 1496 aa18.68■□□□□ 0.58
SYVN1-208ENST00000527142 FBLN2P98095 1184 aa18.64■□□□□ 0.57
SYVN1-208ENST00000527142 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
SYVN1-208ENST00000527142 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
SYVN1-208ENST00000527142 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
SYVN1-208ENST00000527142 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
SYVN1-208ENST00000527142 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
SYVN1-208ENST00000527142 ARHGEF11O15085 1522 aa18.55■□□□□ 0.56
SYVN1-208ENST00000527142 GRIN2AQ12879 1464 aa18.54■□□□□ 0.56
SYVN1-208ENST00000527142 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
SYVN1-208ENST00000527142 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.56
SYVN1-208ENST00000527142 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.56
SYVN1-208ENST00000527142 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.56
SYVN1-208ENST00000527142 NUP160Q12769 1436 aa18.48■□□□□ 0.55
SYVN1-208ENST00000527142 CUL7Q14999 1698 aa18.43■□□□□ 0.54
SYVN1-208ENST00000527142 IGF1RP08069 1367 aa18.42■□□□□ 0.54
SYVN1-208ENST00000527142 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
SYVN1-208ENST00000527142 ARAP1Q96P48 1450 aa18.39■□□□□ 0.54
SYVN1-208ENST00000527142 SHROOM2Q13796 1616 aa18.34■□□□□ 0.53
SYVN1-208ENST00000527142 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.52
SYVN1-208ENST00000527142 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
SYVN1-208ENST00000527142 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
SYVN1-208ENST00000527142 KIAA0586Q9BVV6 1533 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms