RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TXNDC2Q86VQ3 553 aa15.77■□□□□ 0.12
NEDD8-205ENST00000527046 MED14O60244 1454 aa15.77■□□□□ 0.11
NEDD8-205ENST00000527046 ANKLE2Q86XL3 938 aa15.76■□□□□ 0.11
NEDD8-205ENST00000527046 IFT172Q9UG01 1749 aa15.74■□□□□ 0.11
NEDD8-205ENST00000527046 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
NEDD8-205ENST00000527046 PPLO60437 1756 aa15.74■□□□□ 0.11
NEDD8-205ENST00000527046 SCAF11Q99590 1463 aaKnown RBP15.73■□□□□ 0.11
NEDD8-205ENST00000527046 ZNF326Q5BKZ1 582 aaKnown RBP15.73■□□□□ 0.11
NEDD8-205ENST00000527046 POLR1AO95602 1720 aaPredicted RBP15.73■□□□□ 0.11
NEDD8-205ENST00000527046 ADGRF5Q8IZF2 1346 aa15.72■□□□□ 0.11
NEDD8-205ENST00000527046 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
NEDD8-205ENST00000527046 L3MBTL2Q969R5 705 aa15.71■□□□□ 0.11
NEDD8-205ENST00000527046 NRXN3Q9Y4C0 1643 aa15.71■□□□□ 0.11
NEDD8-205ENST00000527046 NPHP4O75161 1426 aaPredicted RBP15.7■□□□□ 0.1
NEDD8-205ENST00000527046 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.7■□□□□ 0.1
NEDD8-205ENST00000527046 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
NEDD8-205ENST00000527046 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
NEDD8-205ENST00000527046 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
NEDD8-205ENST00000527046 ADAMTS13Q76LX8 1427 aa15.69■□□□□ 0.1
NEDD8-205ENST00000527046 NRXN1Q9ULB1 1477 aa15.69■□□□□ 0.1
NEDD8-205ENST00000527046 HDGFP51858 240 aaKnown RBP15.68■□□□□ 0.1
NEDD8-205ENST00000527046 SENP3Q9H4L4 574 aaPredicted RBP15.68■□□□□ 0.1
NEDD8-205ENST00000527046 VGFO15240 615 aaPredicted RBP15.67■□□□□ 0.1
NEDD8-205ENST00000527046 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
NEDD8-205ENST00000527046 DCAF11Q8TEB1 546 aa15.67■□□□□ 0.1
NEDD8-205ENST00000527046 IQGAP1P46940 1657 aa15.67■□□□□ 0.1
NEDD8-205ENST00000527046 SLC26A8Q96RN1 970 aa15.66■□□□□ 0.1
NEDD8-205ENST00000527046 SETBP1Q9Y6X0 1596 aa15.66■□□□□ 0.1
NEDD8-205ENST00000527046 MYOM2P54296 1465 aa15.65■□□□□ 0.1
NEDD8-205ENST00000527046 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
NEDD8-205ENST00000527046 TBX22Q9Y458 520 aa15.65■□□□□ 0.1
NEDD8-205ENST00000527046 SETD1AO15047 1707 aaKnown RBP15.65■□□□□ 0.1
NEDD8-205ENST00000527046 PIK3C2GO75747 1445 aa15.64■□□□□ 0.09
NEDD8-205ENST00000527046 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
NEDD8-205ENST00000527046 NBPF8Q3BBV2 869 aa15.63■□□□□ 0.09
NEDD8-205ENST00000527046 C14orf93Q9H972 538 aaKnown RBP15.63■□□□□ 0.09
NEDD8-205ENST00000527046 STRCP1A6NGW2 1772 aa15.62■□□□□ 0.09
NEDD8-205ENST00000527046 ALKQ9UM73 1620 aa15.62■□□□□ 0.09
NEDD8-205ENST00000527046 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
NEDD8-205ENST00000527046 STAC3Q96MF2 364 aa15.62■□□□□ 0.09
NEDD8-205ENST00000527046 METP08581 1390 aa15.62■□□□□ 0.09
NEDD8-205ENST00000527046 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
NEDD8-205ENST00000527046 CFAP70Q5T0N1 1121 aa15.6■□□□□ 0.09
NEDD8-205ENST00000527046 ZNF335Q9H4Z2 1342 aaPredicted RBP15.6■□□□□ 0.09
NEDD8-205ENST00000527046 ASXL1Q8IXJ9 1541 aa15.59■□□□□ 0.09
NEDD8-205ENST00000527046 PRAG1Q86YV5 1406 aa15.59■□□□□ 0.09
NEDD8-205ENST00000527046 LTBP4Q8N2S1 1624 aa15.58■□□□□ 0.09
NEDD8-205ENST00000527046 CHD2O14647 1828 aaKnown RBP15.58■□□□□ 0.08
NEDD8-205ENST00000527046 TIMELESSQ9UNS1 1208 aa15.57■□□□□ 0.08
NEDD8-205ENST00000527046 KCNA6P17658 529 aa15.56■□□□□ 0.08
NEDD8-205ENST00000527046 NBPF1Q3BBV0 1214 aa15.56■□□□□ 0.08
NEDD8-205ENST00000527046 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
NEDD8-205ENST00000527046 TONSLQ96HA7 1378 aa15.56■□□□□ 0.08
NEDD8-205ENST00000527046 ADGRB1O14514 1584 aa15.56■□□□□ 0.08
NEDD8-205ENST00000527046 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
NEDD8-205ENST00000527046 BCANQ96GW7 911 aa15.55■□□□□ 0.08
NEDD8-205ENST00000527046 PIK3R4Q99570 1358 aa15.54■□□□□ 0.08
NEDD8-205ENST00000527046 AMOTL2Q9Y2J4 779 aa15.53■□□□□ 0.08
NEDD8-205ENST00000527046 NWD1Q149M9 1564 aa15.53■□□□□ 0.08
NEDD8-205ENST00000527046 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
NEDD8-205ENST00000527046 KIAA1210Q9ULL0 1709 aa15.51■□□□□ 0.07
NEDD8-205ENST00000527046 TRPM1Q7Z4N2 1603 aa15.51■□□□□ 0.07
NEDD8-205ENST00000527046 XIRP1Q702N8 1843 aaKnown RBP15.5■□□□□ 0.07
NEDD8-205ENST00000527046 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
NEDD8-205ENST00000527046 ABCC11Q96J66 1382 aa15.49■□□□□ 0.07
NEDD8-205ENST00000527046 LAMC1P11047 1609 aa15.49■□□□□ 0.07
NEDD8-205ENST00000527046 YTHDC2Q9H6S0 1430 aaKnown RBP15.49■□□□□ 0.07
NEDD8-205ENST00000527046 LRRC7Q96NW7 1537 aa15.48■□□□□ 0.07
NEDD8-205ENST00000527046 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
NEDD8-205ENST00000527046 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
NEDD8-205ENST00000527046 TECPR2O15040 1411 aa15.48■□□□□ 0.07
NEDD8-205ENST00000527046 GPRASP1Q5JY77 1395 aa15.48■□□□□ 0.07
NEDD8-205ENST00000527046 ROBO2Q9HCK4 1378 aa15.48■□□□□ 0.07
NEDD8-205ENST00000527046 SIRT1Q96EB6 747 aa15.46■□□□□ 0.07
NEDD8-205ENST00000527046 STK26Q9P289 416 aa15.46■□□□□ 0.07
NEDD8-205ENST00000527046 CPS1P31327 1500 aa15.45■□□□□ 0.06
NEDD8-205ENST00000527046 PLEKHH1Q9ULM0 1364 aa15.45■□□□□ 0.06
NEDD8-205ENST00000527046 KNDC1Q76NI1 1749 aa15.44■□□□□ 0.06
NEDD8-205ENST00000527046 WAPLQ7Z5K2 1190 aa15.44■□□□□ 0.06
NEDD8-205ENST00000527046 PROSER2Q86WR7 435 aaPredicted RBP15.44■□□□□ 0.06
NEDD8-205ENST00000527046 NKTRP30414 1462 aaKnown RBP15.44■□□□□ 0.06
NEDD8-205ENST00000527046 RALGAPBQ86X10 1494 aa15.44■□□□□ 0.06
NEDD8-205ENST00000527046 ILDR1Q86SU0 546 aaPredicted RBP15.43■□□□□ 0.06
NEDD8-205ENST00000527046 TRAK1Q9UPV9 953 aa15.43■□□□□ 0.06
NEDD8-205ENST00000527046 TMEM94Q12767 1356 aa15.43■□□□□ 0.06
NEDD8-205ENST00000527046 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
NEDD8-205ENST00000527046 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
NEDD8-205ENST00000527046 DLC1Q96QB1 1528 aa15.42■□□□□ 0.06
NEDD8-205ENST00000527046 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.41■□□□□ 0.06
NEDD8-205ENST00000527046 FAM135BQ49AJ0 1406 aa15.4■□□□□ 0.06
NEDD8-205ENST00000527046 NCOA3Q9Y6Q9 1424 aa15.4■□□□□ 0.06
NEDD8-205ENST00000527046 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
NEDD8-205ENST00000527046 ROCK2O75116 1388 aaKnown RBP15.39■□□□□ 0.05
NEDD8-205ENST00000527046 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
NEDD8-205ENST00000527046 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
NEDD8-205ENST00000527046 NALCNQ8IZF0 1738 aa15.36■□□□□ 0.05
NEDD8-205ENST00000527046 IQSEC2Q5JU85 1478 aa15.35■□□□□ 0.05
NEDD8-205ENST00000527046 C19orf44Q9H6X5 657 aa15.34■□□□□ 0.05
NEDD8-205ENST00000527046 ADGRL3Q9HAR2 1447 aa15.34■□□□□ 0.05
NEDD8-205ENST00000527046 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms