RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 PPP6R1Q9UPN7 881 aa21.71■■□□□ 1.07
FOXRED1-207ENST00000527004 EIF3AQ14152 1382 aaKnown RBP21.71■■□□□ 1.07
FOXRED1-207ENST00000527004 DISP3Q9P2K9 1392 aa21.7■■□□□ 1.06
FOXRED1-207ENST00000527004 CCDC184Q52MB2 194 aa21.7■■□□□ 1.06
FOXRED1-207ENST00000527004 ADGRF5Q8IZF2 1346 aa21.69■■□□□ 1.06
FOXRED1-207ENST00000527004 AGLP35573 1532 aa21.69■■□□□ 1.06
FOXRED1-207ENST00000527004 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
FOXRED1-207ENST00000527004 RALBP1Q15311 655 aa21.68■■□□□ 1.06
FOXRED1-207ENST00000527004 CDCA8Q53HL2 280 aa21.68■■□□□ 1.06
FOXRED1-207ENST00000527004 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
FOXRED1-207ENST00000527004 SLC52A1Q9NWF4 448 aa21.66■■□□□ 1.06
FOXRED1-207ENST00000527004 KIF13AQ9H1H9 1805 aa21.66■■□□□ 1.06
FOXRED1-207ENST00000527004 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.065e-6■□□□□ 10.2
FOXRED1-207ENST00000527004 CFAP70Q5T0N1 1121 aa21.65■■□□□ 1.06
FOXRED1-207ENST00000527004 PER1O15534 1290 aaPredicted RBP21.64■■□□□ 1.06
FOXRED1-207ENST00000527004 CHGAP10645 457 aaKnown RBP21.64■■□□□ 1.06
FOXRED1-207ENST00000527004 TSPOAP1O95153 1857 aa21.64■■□□□ 1.05
FOXRED1-207ENST00000527004 SYNMO15061 1565 aa21.63■■□□□ 1.05
FOXRED1-207ENST00000527004 SETBP1Q9Y6X0 1596 aa21.63■■□□□ 1.05
FOXRED1-207ENST00000527004 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
FOXRED1-207ENST00000527004 PIK3C2GO75747 1445 aa21.62■■□□□ 1.05
FOXRED1-207ENST00000527004 C14orf93Q9H972 538 aaKnown RBP21.61■■□□□ 1.05
FOXRED1-207ENST00000527004 PPLO60437 1756 aa21.6■■□□□ 1.05
FOXRED1-207ENST00000527004 MYBBP1AQ9BQG0 1328 aaKnown RBP21.6■■□□□ 1.05
FOXRED1-207ENST00000527004 FAM9BQ8IZU0 186 aa21.6■■□□□ 1.05
FOXRED1-207ENST00000527004 VGFO15240 615 aaPredicted RBP21.59■■□□□ 1.05
FOXRED1-207ENST00000527004 PARD3Q8TEW0 1356 aa21.58■■□□□ 1.05
FOXRED1-207ENST00000527004 IDI1Q13907 227 aa21.58■■□□□ 1.04
FOXRED1-207ENST00000527004 BRD4O60885 1362 aaPredicted RBP21.57■■□□□ 1.04
FOXRED1-207ENST00000527004 PANK3Q9H999 370 aa21.57■■□□□ 1.04
FOXRED1-207ENST00000527004 ZFYVE9O95405 1425 aa21.57■■□□□ 1.04
FOXRED1-207ENST00000527004 SBNO2Q9Y2G9 1366 aa21.57■■□□□ 1.04
FOXRED1-207ENST00000527004 TMC1Q8TDI8 760 aa21.55■■□□□ 1.04
FOXRED1-207ENST00000527004 PREX1Q8TCU6 1659 aa21.54■■□□□ 1.04
FOXRED1-207ENST00000527004 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
FOXRED1-207ENST00000527004 CFAP65Q6ZU64 1925 aaKnown RBP21.53■■□□□ 1.04
FOXRED1-207ENST00000527004 ZBED9Q6R2W3 1325 aa21.53■■□□□ 1.04
FOXRED1-207ENST00000527004 ARHGEF40Q8TER5 1519 aa21.53■■□□□ 1.04
FOXRED1-207ENST00000527004 MYO3AQ8NEV4 1616 aa21.53■■□□□ 1.04
FOXRED1-207ENST00000527004 PNISRQ8TF01 805 aaKnown RBP21.53■■□□□ 1.04
FOXRED1-207ENST00000527004 ADGRB1O14514 1584 aa21.52■■□□□ 1.04
FOXRED1-207ENST00000527004 NLRP13Q86W25 1043 aa21.51■■□□□ 1.03
FOXRED1-207ENST00000527004 SUPT16HQ9Y5B9 1047 aaKnown RBP21.51■■□□□ 1.03
FOXRED1-207ENST00000527004 ERVK-7P63135 1459 aa21.51■■□□□ 1.03
FOXRED1-207ENST00000527004 CNGB1Q14028 1251 aaPredicted RBP21.5■■□□□ 1.03
FOXRED1-207ENST00000527004 CENPJQ9HC77 1338 aaPredicted RBP21.48■■□□□ 1.03
FOXRED1-207ENST00000527004 TMEM131LA2VDJ0 1609 aa21.48■■□□□ 1.03
FOXRED1-207ENST00000527004 LRPPRCP42704 1394 aaKnown RBP21.47■■□□□ 1.03
FOXRED1-207ENST00000527004 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
FOXRED1-207ENST00000527004 FBXO31Q5XUX0 539 aaPredicted RBP21.46■■□□□ 1.03
FOXRED1-207ENST00000527004 KDM5AP29375 1690 aaKnown RBP21.46■■□□□ 1.03
FOXRED1-207ENST00000527004 NPC1L1Q9UHC9 1359 aa21.45■■□□□ 1.02
FOXRED1-207ENST00000527004 SPATA31D1Q6ZQQ2 1576 aa21.44■■□□□ 1.02
FOXRED1-207ENST00000527004 CC2D1BQ5T0F9 858 aaKnown RBP21.43■■□□□ 1.02
FOXRED1-207ENST00000527004 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
FOXRED1-207ENST00000527004 NEFLP07196 543 aa21.42■■□□□ 1.02
FOXRED1-207ENST00000527004 PUS7Q96PZ0 661 aaKnown RBP21.42■■□□□ 1.02
FOXRED1-207ENST00000527004 CLTCQ00610 1675 aaKnown RBP21.42■■□□□ 1.02
FOXRED1-207ENST00000527004 INSRP06213 1382 aa21.41■■□□□ 1.02
FOXRED1-207ENST00000527004 AMER1Q5JTC6 1135 aaPredicted RBP21.41■■□□□ 1.02
FOXRED1-207ENST00000527004 TMEM132EQ6IEE7 984 aa21.41■■□□□ 1.02
FOXRED1-207ENST00000527004 MYOM1P52179 1685 aa21.4■■□□□ 1.02
FOXRED1-207ENST00000527004 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.02
FOXRED1-207ENST00000527004 NUTM2DQ5VT03 806 aaPredicted RBP21.38■■□□□ 1.01
FOXRED1-207ENST00000527004 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
FOXRED1-207ENST00000527004 STAG3Q9UJ98 1225 aa21.38■■□□□ 1.01
FOXRED1-207ENST00000527004 MLECQ14165 292 aa21.37■■□□□ 1.01
FOXRED1-207ENST00000527004 FKBP8Q14318 412 aa21.36■■□□□ 1.01
FOXRED1-207ENST00000527004 ZMYM3Q14202 1370 aa21.36■■□□□ 1.01
FOXRED1-207ENST00000527004 A2ML1A8K2U0 1454 aa21.34■■□□□ 1.01
FOXRED1-207ENST00000527004 QRICH2Q9H0J4 1663 aa21.34■■□□□ 1.01
FOXRED1-207ENST00000527004 MYO5BQ9ULV0 1848 aa21.32■■□□□ 1
FOXRED1-207ENST00000527004 EVC2Q86UK5 1308 aa21.32■■□□□ 1
FOXRED1-207ENST00000527004 ARHGEF28Q8N1W1 1705 aaKnown RBP21.31■■□□□ 1
FOXRED1-207ENST00000527004 SMG6Q86US8 1419 aaKnown RBP21.31■■□□□ 1
FOXRED1-207ENST00000527004 PPP2R1AP30153 589 aa21.31■■□□□ 1
FOXRED1-207ENST00000527004 CARD14Q9BXL6 1004 aa21.28■■□□□ 1
FOXRED1-207ENST00000527004 ALKQ9UM73 1620 aa21.28■■□□□ 1
FOXRED1-207ENST00000527004 YTHDC2Q9H6S0 1430 aaKnown RBP21.27■■□□□ 1
FOXRED1-207ENST00000527004 RIMS2Q9UQ26 1411 aa21.27■■□□□ 1
FOXRED1-207ENST00000527004 ERICH6BQ5W0A0 696 aa21.27■■□□□ 1
FOXRED1-207ENST00000527004 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
FOXRED1-207ENST00000527004 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.27■■□□□ 1
FOXRED1-207ENST00000527004 HDGFP51858 240 aaKnown RBP21.25■□□□□ 0.99
FOXRED1-207ENST00000527004 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
FOXRED1-207ENST00000527004 PTPRMP28827 1452 aa21.25■□□□□ 0.99
FOXRED1-207ENST00000527004 BLMP54132 1417 aaPredicted RBP21.25■□□□□ 0.99
FOXRED1-207ENST00000527004 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
FOXRED1-207ENST00000527004 TNRQ92752 1358 aa21.23■□□□□ 0.99
FOXRED1-207ENST00000527004 NINLQ9Y2I6 1382 aa21.23■□□□□ 0.99
FOXRED1-207ENST00000527004 SLC12A5Q9H2X9 1139 aa21.23■□□□□ 0.99
FOXRED1-207ENST00000527004 PDE3BQ13370 1112 aa21.22■□□□□ 0.99
FOXRED1-207ENST00000527004 STK26Q9P289 416 aa21.22■□□□□ 0.99
FOXRED1-207ENST00000527004 DLC1Q96QB1 1528 aa21.2■□□□□ 0.98
FOXRED1-207ENST00000527004 ANKRD36BQ8N2N9 1353 aa21.19■□□□□ 0.98
FOXRED1-207ENST00000527004 PRAM1Q96QH2 718 aa21.19■□□□□ 0.98
FOXRED1-207ENST00000527004 POGKQ9P215 609 aa21.19■□□□□ 0.98
FOXRED1-207ENST00000527004 NSD3Q9BZ95 1437 aa21.19■□□□□ 0.98
FOXRED1-207ENST00000527004 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
FOXRED1-207ENST00000527004 ATAD2Q6PL18 1390 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms