RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 NEXMIFQ5QGS0 1516 aa23.94■■□□□ 1.42
CAPN1-205ENST00000526954 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
CAPN1-205ENST00000526954 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
CAPN1-205ENST00000526954 HSPA2P54652 639 aa23.91■■□□□ 1.42
CAPN1-205ENST00000526954 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.91■■□□□ 1.42
CAPN1-205ENST00000526954 STAC3Q96MF2 364 aa23.9■■□□□ 1.42
CAPN1-205ENST00000526954 TIMELESSQ9UNS1 1208 aa23.89■■□□□ 1.41
CAPN1-205ENST00000526954 POLR1AO95602 1720 aaPredicted RBP23.89■■□□□ 1.41
CAPN1-205ENST00000526954 LTKP29376 864 aa23.88■■□□□ 1.41
CAPN1-205ENST00000526954 TXNDC2Q86VQ3 553 aa23.88■■□□□ 1.41
CAPN1-205ENST00000526954 ANKLE2Q86XL3 938 aa23.88■■□□□ 1.41
CAPN1-205ENST00000526954 EID1Q9Y6B2 187 aa23.88■■□□□ 1.41
CAPN1-205ENST00000526954 TONSLQ96HA7 1378 aa23.88■■□□□ 1.41
CAPN1-205ENST00000526954 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
CAPN1-205ENST00000526954 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
CAPN1-205ENST00000526954 L3MBTL2Q969R5 705 aa23.87■■□□□ 1.41
CAPN1-205ENST00000526954 MYOM2P54296 1465 aa23.86■■□□□ 1.41
CAPN1-205ENST00000526954 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
CAPN1-205ENST00000526954 DCAF11Q8TEB1 546 aa23.85■■□□□ 1.41
CAPN1-205ENST00000526954 MED14O60244 1454 aa23.83■■□□□ 1.41
CAPN1-205ENST00000526954 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
CAPN1-205ENST00000526954 NUTM2DQ5VT03 806 aaPredicted RBP23.82■■□□□ 1.4
CAPN1-205ENST00000526954 PLEKHG1Q9ULL1 1385 aa23.81■■□□□ 1.4
CAPN1-205ENST00000526954 PPP1R15AO75807 674 aaPredicted RBP23.81■■□□□ 1.4
CAPN1-205ENST00000526954 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
CAPN1-205ENST00000526954 ADGRF5Q8IZF2 1346 aa23.8■■□□□ 1.4
CAPN1-205ENST00000526954 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
CAPN1-205ENST00000526954 SETBP1Q9Y6X0 1596 aa23.78■■□□□ 1.4
CAPN1-205ENST00000526954 NPHP4O75161 1426 aaPredicted RBP23.77■■□□□ 1.4
CAPN1-205ENST00000526954 PIK3C2GO75747 1445 aa23.77■■□□□ 1.4
CAPN1-205ENST00000526954 IQGAP1P46940 1657 aa23.77■■□□□ 1.4
CAPN1-205ENST00000526954 NRXN3Q9Y4C0 1643 aa23.76■■□□□ 1.39
CAPN1-205ENST00000526954 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
CAPN1-205ENST00000526954 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
CAPN1-205ENST00000526954 KIAA1210Q9ULL0 1709 aa23.71■■□□□ 1.39
CAPN1-205ENST00000526954 ALKQ9UM73 1620 aa23.71■■□□□ 1.39
CAPN1-205ENST00000526954 DIP2AQ14689 1571 aa23.71■■□□□ 1.39
CAPN1-205ENST00000526954 DMRT2Q9Y5R5 561 aa23.71■■□□□ 1.39
CAPN1-205ENST00000526954 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.39
CAPN1-205ENST00000526954 LAMC1P11047 1609 aa23.7■■□□□ 1.39
CAPN1-205ENST00000526954 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
CAPN1-205ENST00000526954 TBX22Q9Y458 520 aa23.69■■□□□ 1.38
CAPN1-205ENST00000526954 NBPF8Q3BBV2 869 aa23.68■■□□□ 1.38
CAPN1-205ENST00000526954 BCANQ96GW7 911 aa23.68■■□□□ 1.38
CAPN1-205ENST00000526954 TRPM1Q7Z4N2 1603 aa23.66■■□□□ 1.38
CAPN1-205ENST00000526954 CFAP70Q5T0N1 1121 aa23.65■■□□□ 1.38
CAPN1-205ENST00000526954 SLC26A8Q96RN1 970 aa23.65■■□□□ 1.38
CAPN1-205ENST00000526954 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-205ENST00000526954 PIK3R4Q99570 1358 aa23.63■■□□□ 1.37
CAPN1-205ENST00000526954 METP08581 1390 aa23.61■■□□□ 1.37
CAPN1-205ENST00000526954 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
CAPN1-205ENST00000526954 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
CAPN1-205ENST00000526954 RALGAPBQ86X10 1494 aa23.6■■□□□ 1.37
CAPN1-205ENST00000526954 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
CAPN1-205ENST00000526954 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
CAPN1-205ENST00000526954 NBPF1Q3BBV0 1214 aa23.57■■□□□ 1.36
CAPN1-205ENST00000526954 GPRASP1Q5JY77 1395 aa23.56■■□□□ 1.36
CAPN1-205ENST00000526954 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
CAPN1-205ENST00000526954 PTPRUQ92729 1446 aa23.55■■□□□ 1.36
CAPN1-205ENST00000526954 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
CAPN1-205ENST00000526954 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
CAPN1-205ENST00000526954 XRN1Q8IZH2 1706 aaKnown RBP23.53■■□□□ 1.36
CAPN1-205ENST00000526954 KCNA6P17658 529 aa23.53■■□□□ 1.36
CAPN1-205ENST00000526954 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
CAPN1-205ENST00000526954 YTHDC2Q9H6S0 1430 aaKnown RBP23.52■■□□□ 1.36
CAPN1-205ENST00000526954 KNDC1Q76NI1 1749 aa23.52■■□□□ 1.36
CAPN1-205ENST00000526954 STRCP1A6NGW2 1772 aa23.52■■□□□ 1.36
CAPN1-205ENST00000526954 ABCC11Q96J66 1382 aa23.51■■□□□ 1.35
CAPN1-205ENST00000526954 AMOTL2Q9Y2J4 779 aa23.5■■□□□ 1.35
CAPN1-205ENST00000526954 TECPR2O15040 1411 aa23.5■■□□□ 1.35
CAPN1-205ENST00000526954 DLC1Q96QB1 1528 aa23.48■■□□□ 1.35
CAPN1-205ENST00000526954 SIRT1Q96EB6 747 aa23.47■■□□□ 1.35
CAPN1-205ENST00000526954 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
CAPN1-205ENST00000526954 ZNF335Q9H4Z2 1342 aaPredicted RBP23.47■■□□□ 1.35
CAPN1-205ENST00000526954 NKTRP30414 1462 aaKnown RBP23.47■■□□□ 1.35
CAPN1-205ENST00000526954 CPS1P31327 1500 aa23.47■■□□□ 1.35
CAPN1-205ENST00000526954 PTCH1Q13635 1447 aa23.45■■□□□ 1.34
CAPN1-205ENST00000526954 STK26Q9P289 416 aa23.45■■□□□ 1.34
CAPN1-205ENST00000526954 ARHGEF28Q8N1W1 1705 aaKnown RBP23.44■■□□□ 1.34
CAPN1-205ENST00000526954 FAM135BQ49AJ0 1406 aa23.43■■□□□ 1.34
CAPN1-205ENST00000526954 TRAK1Q9UPV9 953 aa23.43■■□□□ 1.34
CAPN1-205ENST00000526954 LTBP4Q8N2S1 1624 aa23.42■■□□□ 1.34
CAPN1-205ENST00000526954 ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
CAPN1-205ENST00000526954 EIF3AQ14152 1382 aaKnown RBP23.38■■□□□ 1.33
CAPN1-205ENST00000526954 PROSER2Q86WR7 435 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-205ENST00000526954 LRRC7Q96NW7 1537 aa23.37■■□□□ 1.33
CAPN1-205ENST00000526954 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
CAPN1-205ENST00000526954 USP47Q96K76 1375 aa23.36■■□□□ 1.33
CAPN1-205ENST00000526954 XIRP1Q702N8 1843 aaKnown RBP23.36■■□□□ 1.33
CAPN1-205ENST00000526954 PRAM1Q96QH2 718 aa23.35■■□□□ 1.33
CAPN1-205ENST00000526954 WAPLQ7Z5K2 1190 aa23.34■■□□□ 1.33
CAPN1-205ENST00000526954 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
CAPN1-205ENST00000526954 POGKQ9P215 609 aa23.33■■□□□ 1.33
CAPN1-205ENST00000526954 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.32
CAPN1-205ENST00000526954 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
CAPN1-205ENST00000526954 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.32■■□□□ 1.32
CAPN1-205ENST00000526954 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
CAPN1-205ENST00000526954 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.32
CAPN1-205ENST00000526954 NALCNQ8IZF0 1738 aa23.29■■□□□ 1.32
CAPN1-205ENST00000526954 SBNO2Q9Y2G9 1366 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms