RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CCDC144AA2RUR9 1427 aa25.53■■□□□ 1.68
LMX1B-203ENST00000526117 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.52■■□□□ 1.68
LMX1B-203ENST00000526117 FOXD1Q16676 465 aa25.51■■□□□ 1.67
LMX1B-203ENST00000526117 LTBP4Q8N2S1 1624 aa25.5■■□□□ 1.67
LMX1B-203ENST00000526117 PLEKHG1Q9ULL1 1385 aa25.5■■□□□ 1.67
LMX1B-203ENST00000526117 CHGAP10645 457 aaKnown RBP25.48■■□□□ 1.67
LMX1B-203ENST00000526117 NEXMIFQ5QGS0 1516 aa25.47■■□□□ 1.67
LMX1B-203ENST00000526117 ANKRD30BQ9BXX2 1392 aa25.46■■□□□ 1.67
LMX1B-203ENST00000526117 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
LMX1B-203ENST00000526117 RPGRIP1LQ68CZ1 1315 aa25.44■■□□□ 1.66
LMX1B-203ENST00000526117 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
LMX1B-203ENST00000526117 IQSEC2Q5JU85 1478 aa25.42■■□□□ 1.66
LMX1B-203ENST00000526117 FBXO41Q8TF61 875 aa25.42■■□□□ 1.66
LMX1B-203ENST00000526117 CPS1P31327 1500 aa25.42■■□□□ 1.66
LMX1B-203ENST00000526117 SETBP1Q9Y6X0 1596 aa25.41■■□□□ 1.66
LMX1B-203ENST00000526117 ZNF335Q9H4Z2 1342 aaPredicted RBP25.4■■□□□ 1.66
LMX1B-203ENST00000526117 PPP1R15AO75807 674 aaPredicted RBP25.39■■□□□ 1.66
LMX1B-203ENST00000526117 PPLO60437 1756 aa25.39■■□□□ 1.65
LMX1B-203ENST00000526117 ZNF326Q5BKZ1 582 aaKnown RBP25.38■■□□□ 1.65
LMX1B-203ENST00000526117 IFT172Q9UG01 1749 aa25.37■■□□□ 1.65
LMX1B-203ENST00000526117 ADAMTS13Q76LX8 1427 aa25.37■■□□□ 1.65
LMX1B-203ENST00000526117 NRXN3Q9Y4C0 1643 aa25.35■■□□□ 1.65
LMX1B-203ENST00000526117 CERKQ8TCT0 537 aa25.35■■□□□ 1.65
LMX1B-203ENST00000526117 TBX22Q9Y458 520 aa25.35■■□□□ 1.65
LMX1B-203ENST00000526117 NWD1Q149M9 1564 aa25.35■■□□□ 1.65
LMX1B-203ENST00000526117 PIK3R4Q99570 1358 aa25.34■■□□□ 1.65
LMX1B-203ENST00000526117 VGFO15240 615 aaPredicted RBP25.34■■□□□ 1.65
LMX1B-203ENST00000526117 STRCP1A6NGW2 1772 aa25.33■■□□□ 1.65
LMX1B-203ENST00000526117 NKTRP30414 1462 aaKnown RBP25.29■■□□□ 1.64
LMX1B-203ENST00000526117 SLC26A8Q96RN1 970 aa25.29■■□□□ 1.64
LMX1B-203ENST00000526117 CHD2O14647 1828 aaKnown RBP25.28■■□□□ 1.64
LMX1B-203ENST00000526117 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
LMX1B-203ENST00000526117 MYOM2P54296 1465 aa25.28■■□□□ 1.64
LMX1B-203ENST00000526117 KCNA6P17658 529 aa25.27■■□□□ 1.64
LMX1B-203ENST00000526117 DHX57Q6P158 1386 aaKnown RBP25.27■■□□□ 1.64
LMX1B-203ENST00000526117 BCANQ96GW7 911 aa25.25■■□□□ 1.63
LMX1B-203ENST00000526117 NRXN1Q9ULB1 1477 aa25.25■■□□□ 1.63
LMX1B-203ENST00000526117 LRRC7Q96NW7 1537 aa25.25■■□□□ 1.63
LMX1B-203ENST00000526117 SETD1AO15047 1707 aaKnown RBP25.25■■□□□ 1.63
LMX1B-203ENST00000526117 STAC3Q96MF2 364 aa25.24■■□□□ 1.63
LMX1B-203ENST00000526117 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
LMX1B-203ENST00000526117 PIK3C2GO75747 1445 aa25.21■■□□□ 1.63
LMX1B-203ENST00000526117 ALKQ9UM73 1620 aa25.21■■□□□ 1.63
LMX1B-203ENST00000526117 PRAG1Q86YV5 1406 aa25.2■■□□□ 1.63
LMX1B-203ENST00000526117 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.62
LMX1B-203ENST00000526117 ADGRF5Q8IZF2 1346 aa25.18■■□□□ 1.62
LMX1B-203ENST00000526117 PTPRUQ92729 1446 aa25.17■■□□□ 1.62
LMX1B-203ENST00000526117 NCOA3Q9Y6Q9 1424 aa25.17■■□□□ 1.62
LMX1B-203ENST00000526117 METP08581 1390 aa25.17■■□□□ 1.62
LMX1B-203ENST00000526117 LAMC1P11047 1609 aa25.16■■□□□ 1.62
LMX1B-203ENST00000526117 XIRP1Q702N8 1843 aaKnown RBP25.15■■□□□ 1.62
LMX1B-203ENST00000526117 PCGF6Q9BYE7 350 aa25.11■■□□□ 1.61
LMX1B-203ENST00000526117 SENP3Q9H4L4 574 aaPredicted RBP25.11■■□□□ 1.61
LMX1B-203ENST00000526117 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
LMX1B-203ENST00000526117 AMOTL2Q9Y2J4 779 aa25.1■■□□□ 1.61
LMX1B-203ENST00000526117 PTCH1Q13635 1447 aa25.1■■□□□ 1.61
LMX1B-203ENST00000526117 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
LMX1B-203ENST00000526117 ASXL1Q8IXJ9 1541 aa25.07■■□□□ 1.6
LMX1B-203ENST00000526117 TECPR2O15040 1411 aa25.07■■□□□ 1.6
LMX1B-203ENST00000526117 C14orf93Q9H972 538 aaKnown RBP25.07■■□□□ 1.6
LMX1B-203ENST00000526117 DCAF11Q8TEB1 546 aa25.06■■□□□ 1.6
LMX1B-203ENST00000526117 KNDC1Q76NI1 1749 aa25.05■■□□□ 1.6
LMX1B-203ENST00000526117 LRPPRCP42704 1394 aaKnown RBP25.02■■□□□ 1.6
LMX1B-203ENST00000526117 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
LMX1B-203ENST00000526117 TOM1O60784 492 aa25.01■■□□□ 1.59
LMX1B-203ENST00000526117 SIN3AQ96ST3 1273 aa25.01■■□□□ 1.59
LMX1B-203ENST00000526117 CLSPNQ9HAW4 1339 aa25.01■■□□□ 1.59
LMX1B-203ENST00000526117 ABCC11Q96J66 1382 aa25.01■■□□□ 1.59
LMX1B-203ENST00000526117 ADGRB1O14514 1584 aa25.01■■□□□ 1.59
LMX1B-203ENST00000526117 MSH6P52701 1360 aa25■■□□□ 1.59
LMX1B-203ENST00000526117 DCCP43146 1447 aa25■■□□□ 1.59
LMX1B-203ENST00000526117 UBAP1LF5GYI3 381 aa24.99■■□□□ 1.59
LMX1B-203ENST00000526117 YTHDC2Q9H6S0 1430 aaKnown RBP24.98■■□□□ 1.59
LMX1B-203ENST00000526117 ROBO2Q9HCK4 1378 aa24.97■■□□□ 1.59
LMX1B-203ENST00000526117 CFAP70Q5T0N1 1121 aa24.97■■□□□ 1.59
LMX1B-203ENST00000526117 KDM2AQ9Y2K7 1162 aa24.97■■□□□ 1.59
LMX1B-203ENST00000526117 SIRT1Q96EB6 747 aa24.96■■□□□ 1.59
LMX1B-203ENST00000526117 FAM135BQ49AJ0 1406 aa24.95■■□□□ 1.59
LMX1B-203ENST00000526117 ADGRL3Q9HAR2 1447 aa24.95■■□□□ 1.59
LMX1B-203ENST00000526117 L3MBTL2Q969R5 705 aa24.95■■□□□ 1.58
LMX1B-203ENST00000526117 C19orf44Q9H6X5 657 aa24.95■■□□□ 1.58
LMX1B-203ENST00000526117 DLC1Q96QB1 1528 aa24.95■■□□□ 1.58
LMX1B-203ENST00000526117 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.95■■□□□ 1.58
LMX1B-203ENST00000526117 NALCNQ8IZF0 1738 aa24.92■■□□□ 1.58
LMX1B-203ENST00000526117 NEUROD1Q13562 356 aa24.92■■□□□ 1.58
LMX1B-203ENST00000526117 TMEM132EQ6IEE7 984 aa24.92■■□□□ 1.58
LMX1B-203ENST00000526117 RBM33Q96EV2 1170 aaKnown RBP24.91■■□□□ 1.58
LMX1B-203ENST00000526117 CADPS2Q86UW7 1296 aa24.89■■□□□ 1.58
LMX1B-203ENST00000526117 TONSLQ96HA7 1378 aa24.87■■□□□ 1.57
LMX1B-203ENST00000526117 CDC42BPGQ6DT37 1551 aa24.86■■□□□ 1.57
LMX1B-203ENST00000526117 C14orf37Q86TY3 774 aa24.86■■□□□ 1.57
LMX1B-203ENST00000526117 TRPM1Q7Z4N2 1603 aa24.85■■□□□ 1.57
LMX1B-203ENST00000526117 ATF3P18847 181 aa24.84■■□□□ 1.57
LMX1B-203ENST00000526117 STK26Q9P289 416 aa24.84■■□□□ 1.57
LMX1B-203ENST00000526117 SLAIN2Q9P270 581 aa24.82■■□□□ 1.56
LMX1B-203ENST00000526117 TIMELESSQ9UNS1 1208 aa24.82■■□□□ 1.56
LMX1B-203ENST00000526117 MST1RQ04912 1400 aa24.81■■□□□ 1.56
LMX1B-203ENST00000526117 ROBO1Q9Y6N7 1651 aa24.81■■□□□ 1.56
LMX1B-203ENST00000526117 ARHGEF28Q8N1W1 1705 aaKnown RBP24.81■■□□□ 1.56
LMX1B-203ENST00000526117 PIP4K2BP78356 416 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms