RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 MYO5BQ9ULV0 1848 aa26.18■■□□□ 1.78
NR1H3-228ENST00000525441 ACIN1Q9UKV3 1341 aaKnown RBP26.17■■□□□ 1.78
NR1H3-228ENST00000525441 UBAP1LF5GYI3 381 aa26.17■■□□□ 1.78
NR1H3-228ENST00000525441 PLEKHG1Q9ULL1 1385 aa26.16■■□□□ 1.78
NR1H3-228ENST00000525441 TRPM2O94759 1503 aa26.14■■□□□ 1.78
NR1H3-228ENST00000525441 SLC26A8Q96RN1 970 aa26.14■■□□□ 1.78
NR1H3-228ENST00000525441 SETD5Q9C0A6 1442 aa26.12■■□□□ 1.77
NR1H3-228ENST00000525441 STRCP1A6NGW2 1772 aa26.1■■□□□ 1.77
NR1H3-228ENST00000525441 LRRC7Q96NW7 1537 aa26.1■■□□□ 1.77
NR1H3-228ENST00000525441 TOM1O60784 492 aa26.09■■□□□ 1.77
NR1H3-228ENST00000525441 KCNA6P17658 529 aa26.09■■□□□ 1.77
NR1H3-228ENST00000525441 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
NR1H3-228ENST00000525441 CLTCL1P53675 1640 aa26.08■■□□□ 1.77
NR1H3-228ENST00000525441 NUTM2DQ5VT03 806 aaPredicted RBP26.07■■□□□ 1.76
NR1H3-228ENST00000525441 MPHOSPH9Q99550 1183 aa26.06■■□□□ 1.76
NR1H3-228ENST00000525441 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
NR1H3-228ENST00000525441 TBX22Q9Y458 520 aa26.05■■□□□ 1.76
NR1H3-228ENST00000525441 KIF1BO60333 1816 aa26.02■■□□□ 1.76
NR1H3-228ENST00000525441 DIP2AQ14689 1571 aa26■■□□□ 1.75
NR1H3-228ENST00000525441 RAB3GAP2Q9H2M9 1393 aa26■■□□□ 1.75
NR1H3-228ENST00000525441 SCAF1Q9H7N4 1312 aaKnown RBP26■■□□□ 1.75
NR1H3-228ENST00000525441 FOXD1Q16676 465 aa26■■□□□ 1.75
NR1H3-228ENST00000525441 NKTRP30414 1462 aaKnown RBP25.99■■□□□ 1.75
NR1H3-228ENST00000525441 ADAMTS13Q76LX8 1427 aa25.99■■□□□ 1.75
NR1H3-228ENST00000525441 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
NR1H3-228ENST00000525441 NWD1Q149M9 1564 aa25.99■■□□□ 1.75
NR1H3-228ENST00000525441 PIP4K2BP78356 416 aa25.98■■□□□ 1.75
NR1H3-228ENST00000525441 PIK3R4Q99570 1358 aa25.97■■□□□ 1.75
NR1H3-228ENST00000525441 CCDC144AA2RUR9 1427 aa25.97■■□□□ 1.75
NR1H3-228ENST00000525441 TMEM94Q12767 1356 aa25.96■■□□□ 1.75
NR1H3-228ENST00000525441 NEXMIFQ5QGS0 1516 aa25.94■■□□□ 1.74
NR1H3-228ENST00000525441 RPGRIP1LQ68CZ1 1315 aa25.94■■□□□ 1.74
NR1H3-228ENST00000525441 SETBP1Q9Y6X0 1596 aa25.93■■□□□ 1.74
NR1H3-228ENST00000525441 CHD2O14647 1828 aaKnown RBP25.93■■□□□ 1.74
NR1H3-228ENST00000525441 VGFO15240 615 aaPredicted RBP25.92■■□□□ 1.74
NR1H3-228ENST00000525441 HRCP23327 699 aa25.91■■□□□ 1.74
NR1H3-228ENST00000525441 XIRP1Q702N8 1843 aaKnown RBP25.9■■□□□ 1.74
NR1H3-228ENST00000525441 ALKQ9UM73 1620 aa25.88■■□□□ 1.73
NR1H3-228ENST00000525441 RBM33Q96EV2 1170 aaKnown RBP25.87■■□□□ 1.73
NR1H3-228ENST00000525441 NRXN3Q9Y4C0 1643 aa25.87■■□□□ 1.73
NR1H3-228ENST00000525441 AMOTL2Q9Y2J4 779 aa25.86■■□□□ 1.73
NR1H3-228ENST00000525441 MSH6P52701 1360 aa25.85■■□□□ 1.73
NR1H3-228ENST00000525441 NCOA3Q9Y6Q9 1424 aa25.85■■□□□ 1.73
NR1H3-228ENST00000525441 HSPA1LP34931 641 aa25.83■■□□□ 1.73
NR1H3-228ENST00000525441 SPATA31E1Q6ZUB1 1445 aa25.82■■□□□ 1.72
NR1H3-228ENST00000525441 RGL3Q3MIN7 710 aa25.82■■□□□ 1.72
NR1H3-228ENST00000525441 C14orf37Q86TY3 774 aa25.82■■□□□ 1.72
NR1H3-228ENST00000525441 PTPRUQ92729 1446 aa25.81■■□□□ 1.72
NR1H3-228ENST00000525441 METP08581 1390 aa25.81■■□□□ 1.72
NR1H3-228ENST00000525441 PPLO60437 1756 aa25.79■■□□□ 1.72
NR1H3-228ENST00000525441 ANKRD30BQ9BXX2 1392 aa25.79■■□□□ 1.72
NR1H3-228ENST00000525441 FAM135BQ49AJ0 1406 aa25.76■■□□□ 1.71
NR1H3-228ENST00000525441 XRN1Q8IZH2 1706 aaKnown RBP25.76■■□□□ 1.71
NR1H3-228ENST00000525441 C19orf44Q9H6X5 657 aa25.75■■□□□ 1.71
NR1H3-228ENST00000525441 ADGRF5Q8IZF2 1346 aa25.72■■□□□ 1.71
NR1H3-228ENST00000525441 SLAIN2Q9P270 581 aa25.72■■□□□ 1.71
NR1H3-228ENST00000525441 ATF3P18847 181 aa25.71■■□□□ 1.71
NR1H3-228ENST00000525441 CADPS2Q86UW7 1296 aa25.71■■□□□ 1.71
NR1H3-228ENST00000525441 IFT172Q9UG01 1749 aa25.68■■□□□ 1.7
NR1H3-228ENST00000525441 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
NR1H3-228ENST00000525441 DISP3Q9P2K9 1392 aa25.67■■□□□ 1.7
NR1H3-228ENST00000525441 DCCP43146 1447 aa25.66■■□□□ 1.7
NR1H3-228ENST00000525441 PTCH1Q13635 1447 aa25.66■■□□□ 1.7
NR1H3-228ENST00000525441 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.66■■□□□ 1.7
NR1H3-228ENST00000525441 ROBO1Q9Y6N7 1651 aa25.64■■□□□ 1.7
NR1H3-228ENST00000525441 PIK3C2GO75747 1445 aa25.64■■□□□ 1.7
NR1H3-228ENST00000525441 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
NR1H3-228ENST00000525441 ADGRL3Q9HAR2 1447 aa25.63■■□□□ 1.69
NR1H3-228ENST00000525441 MYOM2P54296 1465 aa25.62■■□□□ 1.69
NR1H3-228ENST00000525441 ROBO2Q9HCK4 1378 aa25.6■■□□□ 1.69
NR1H3-228ENST00000525441 NRXN1Q9ULB1 1477 aa25.58■■□□□ 1.69
NR1H3-228ENST00000525441 C14orf93Q9H972 538 aaKnown RBP25.57■■□□□ 1.68
NR1H3-228ENST00000525441 LRPPRCP42704 1394 aaKnown RBP25.56■■□□□ 1.68
NR1H3-228ENST00000525441 STAC3Q96MF2 364 aa25.56■■□□□ 1.68
NR1H3-228ENST00000525441 STK26Q9P289 416 aa25.55■■□□□ 1.68
NR1H3-228ENST00000525441 TMEM132EQ6IEE7 984 aa25.54■■□□□ 1.68
NR1H3-228ENST00000525441 ABCC11Q96J66 1382 aa25.54■■□□□ 1.68
NR1H3-228ENST00000525441 TECPR2O15040 1411 aa25.54■■□□□ 1.68
NR1H3-228ENST00000525441 NALCNQ8IZF0 1738 aa25.53■■□□□ 1.68
NR1H3-228ENST00000525441 MST1RQ04912 1400 aa25.53■■□□□ 1.68
NR1H3-228ENST00000525441 MED1Q15648 1581 aaPredicted RBP25.52■■□□□ 1.68
NR1H3-228ENST00000525441 LAMC1P11047 1609 aa25.52■■□□□ 1.68
NR1H3-228ENST00000525441 CFAP70Q5T0N1 1121 aa25.52■■□□□ 1.68
NR1H3-228ENST00000525441 DCAF11Q8TEB1 546 aa25.52■■□□□ 1.68
NR1H3-228ENST00000525441 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
NR1H3-228ENST00000525441 YTHDC2Q9H6S0 1430 aaKnown RBP25.51■■□□□ 1.67
NR1H3-228ENST00000525441 ASXL1Q8IXJ9 1541 aa25.51■■□□□ 1.67
NR1H3-228ENST00000525441 PHLPP1O60346 1717 aa25.5■■□□□ 1.67
NR1H3-228ENST00000525441 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
NR1H3-228ENST00000525441 BRINP3Q76B58 766 aa25.5■■□□□ 1.67
NR1H3-228ENST00000525441 KNDC1Q76NI1 1749 aa25.47■■□□□ 1.67
NR1H3-228ENST00000525441 AHDC1Q5TGY3 1603 aaPredicted RBP25.46■■□□□ 1.67
NR1H3-228ENST00000525441 TRIM26Q12899 539 aaPredicted RBP25.46■■□□□ 1.67
NR1H3-228ENST00000525441 SIRT1Q96EB6 747 aa25.46■■□□□ 1.67
NR1H3-228ENST00000525441 WAPLQ7Z5K2 1190 aa25.45■■□□□ 1.66
NR1H3-228ENST00000525441 JCADQ9P266 1359 aa25.44■■□□□ 1.66
NR1H3-228ENST00000525441 PHF23Q9BUL5 403 aaPredicted RBP25.44■■□□□ 1.66
NR1H3-228ENST00000525441 C1orf167Q5SNV9 1468 aa25.44■■□□□ 1.66
NR1H3-228ENST00000525441 COL16A1Q07092 1604 aaPredicted RBP25.42■■□□□ 1.66
NR1H3-228ENST00000525441 CDC42BPGQ6DT37 1551 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms