RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
BEST1-204ENST00000524926 IFT172Q9UG01 1749 aa20.92■□□□□ 0.94
BEST1-204ENST00000524926 IQGAP1P46940 1657 aa20.92■□□□□ 0.94
BEST1-204ENST00000524926 KIAA1210Q9ULL0 1709 aa20.91■□□□□ 0.94
BEST1-204ENST00000524926 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
BEST1-204ENST00000524926 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
BEST1-204ENST00000524926 RPGRIP1LQ68CZ1 1315 aa20.89■□□□□ 0.93
BEST1-204ENST00000524926 SYNMO15061 1565 aa20.89■□□□□ 0.93
BEST1-204ENST00000524926 IDI1Q13907 227 aa20.89■□□□□ 0.93
BEST1-204ENST00000524926 EIF3AQ14152 1382 aaKnown RBP20.89■□□□□ 0.93
BEST1-204ENST00000524926 SLC52A1Q9NWF4 448 aa20.87■□□□□ 0.93
BEST1-204ENST00000524926 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
BEST1-204ENST00000524926 MLECQ14165 292 aa20.87■□□□□ 0.93
BEST1-204ENST00000524926 REREQ9P2R6 1566 aa20.86■□□□□ 0.93
BEST1-204ENST00000524926 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
BEST1-204ENST00000524926 PPLO60437 1756 aa20.85■□□□□ 0.93
BEST1-204ENST00000524926 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
BEST1-204ENST00000524926 AGLP35573 1532 aa20.84■□□□□ 0.93
BEST1-204ENST00000524926 FBXO31Q5XUX0 539 aaPredicted RBP20.84■□□□□ 0.93
BEST1-204ENST00000524926 PANK3Q9H999 370 aa20.84■□□□□ 0.93
BEST1-204ENST00000524926 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
BEST1-204ENST00000524926 CDCA8Q53HL2 280 aa20.84■□□□□ 0.93
BEST1-204ENST00000524926 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.92
BEST1-204ENST00000524926 C14orf93Q9H972 538 aaKnown RBP20.83■□□□□ 0.92
BEST1-204ENST00000524926 PIK3C2GO75747 1445 aa20.82■□□□□ 0.92
BEST1-204ENST00000524926 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
BEST1-204ENST00000524926 RALBP1Q15311 655 aa20.82■□□□□ 0.92
BEST1-204ENST00000524926 PREX1Q8TCU6 1659 aa20.82■□□□□ 0.92
BEST1-204ENST00000524926 KTN1Q86UP2 1357 aaKnown RBP20.8■□□□□ 0.92
BEST1-204ENST00000524926 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
BEST1-204ENST00000524926 SLC24A1O60721 1099 aa20.78■□□□□ 0.92
BEST1-204ENST00000524926 TMEM132EQ6IEE7 984 aa20.78■□□□□ 0.92
BEST1-204ENST00000524926 ARHGEF40Q8TER5 1519 aa20.78■□□□□ 0.92
BEST1-204ENST00000524926 TRAK1Q9UPV9 953 aa20.78■□□□□ 0.92
BEST1-204ENST00000524926 MYBBP1AQ9BQG0 1328 aaKnown RBP20.77■□□□□ 0.92
BEST1-204ENST00000524926 CLTCQ00610 1675 aaKnown RBP20.77■□□□□ 0.92
BEST1-204ENST00000524926 SETBP1Q9Y6X0 1596 aa20.77■□□□□ 0.91
BEST1-204ENST00000524926 NEXMIFQ5QGS0 1516 aa20.77■□□□□ 0.91
BEST1-204ENST00000524926 ESF1Q9H501 851 aaKnown RBP20.76■□□□□ 0.91
BEST1-204ENST00000524926 STAG3Q9UJ98 1225 aa20.76■□□□□ 0.91
BEST1-204ENST00000524926 CC2D1BQ5T0F9 858 aaKnown RBP20.76■□□□□ 0.91
BEST1-204ENST00000524926 ERVK-7P63135 1459 aa20.76■□□□□ 0.91
BEST1-204ENST00000524926 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
BEST1-204ENST00000524926 CENPJQ9HC77 1338 aaPredicted RBP20.73■□□□□ 0.91
BEST1-204ENST00000524926 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
BEST1-204ENST00000524926 TMEM131LA2VDJ0 1609 aa20.73■□□□□ 0.91
BEST1-204ENST00000524926 PARD3Q8TEW0 1356 aa20.73■□□□□ 0.91
BEST1-204ENST00000524926 ADGRB1O14514 1584 aa20.71■□□□□ 0.91
BEST1-204ENST00000524926 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
BEST1-204ENST00000524926 KNSTRNQ9Y448 316 aa20.71■□□□□ 0.91
BEST1-204ENST00000524926 BRD4O60885 1362 aaPredicted RBP20.71■□□□□ 0.91
BEST1-204ENST00000524926 KDM5AP29375 1690 aaKnown RBP20.69■□□□□ 0.9
BEST1-204ENST00000524926 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
BEST1-204ENST00000524926 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
BEST1-204ENST00000524926 MYO3AQ8NEV4 1616 aa20.68■□□□□ 0.9
BEST1-204ENST00000524926 SUPT16HQ9Y5B9 1047 aaKnown RBP20.67■□□□□ 0.9
BEST1-204ENST00000524926 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
BEST1-204ENST00000524926 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
BEST1-204ENST00000524926 ZMYM3Q14202 1370 aa20.67■□□□□ 0.9
BEST1-204ENST00000524926 ZBED9Q6R2W3 1325 aa20.66■□□□□ 0.9
BEST1-204ENST00000524926 SPATA31D1Q6ZQQ2 1576 aa20.65■□□□□ 0.9
BEST1-204ENST00000524926 MYOM1P52179 1685 aa20.64■□□□□ 0.89
BEST1-204ENST00000524926 STK26Q9P289 416 aa20.63■□□□□ 0.89
BEST1-204ENST00000524926 QRICH2Q9H0J4 1663 aa20.62■□□□□ 0.89
BEST1-204ENST00000524926 AMER1Q5JTC6 1135 aaPredicted RBP20.62■□□□□ 0.89
BEST1-204ENST00000524926 NEFLP07196 543 aa20.61■□□□□ 0.89
BEST1-204ENST00000524926 FKBP8Q14318 412 aa20.61■□□□□ 0.89
BEST1-204ENST00000524926 A2ML1A8K2U0 1454 aa20.6■□□□□ 0.89
BEST1-204ENST00000524926 SAFB2Q14151 953 aaKnown RBP eCLIP20.59■□□□□ 0.89
BEST1-204ENST00000524926 LRPPRCP42704 1394 aaKnown RBP20.58■□□□□ 0.89
BEST1-204ENST00000524926 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.88
BEST1-204ENST00000524926 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.88
BEST1-204ENST00000524926 ARHGEF28Q8N1W1 1705 aaKnown RBP20.57■□□□□ 0.88
BEST1-204ENST00000524926 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
BEST1-204ENST00000524926 EVC2Q86UK5 1308 aa20.56■□□□□ 0.88
BEST1-204ENST00000524926 CARD14Q9BXL6 1004 aa20.55■□□□□ 0.88
BEST1-204ENST00000524926 SLC12A5Q9H2X9 1139 aa20.55■□□□□ 0.88
BEST1-204ENST00000524926 PPP2R1AP30153 589 aa20.54■□□□□ 0.88
BEST1-204ENST00000524926 ALKQ9UM73 1620 aa20.54■□□□□ 0.88
BEST1-204ENST00000524926 TNRQ92752 1358 aa20.53■□□□□ 0.88
BEST1-204ENST00000524926 NPC1L1Q9UHC9 1359 aa20.53■□□□□ 0.88
BEST1-204ENST00000524926 YTHDC2Q9H6S0 1430 aaKnown RBP20.53■□□□□ 0.88
BEST1-204ENST00000524926 POGKQ9P215 609 aa20.53■□□□□ 0.88
BEST1-204ENST00000524926 PRAM1Q96QH2 718 aa20.52■□□□□ 0.88
BEST1-204ENST00000524926 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
BEST1-204ENST00000524926 CABP2Q9NPB3 220 aa20.51■□□□□ 0.87
BEST1-204ENST00000524926 BCANQ96GW7 911 aa20.5■□□□□ 0.87
BEST1-204ENST00000524926 PUS7Q96PZ0 661 aaKnown RBP20.49■□□□□ 0.87
BEST1-204ENST00000524926 HDGFP51858 240 aaKnown RBP20.49■□□□□ 0.87
BEST1-204ENST00000524926 TULP4Q9NRJ4 1543 aa20.48■□□□□ 0.87
BEST1-204ENST00000524926 CEBPAP49715 358 aaPredicted RBP20.48■□□□□ 0.87
BEST1-204ENST00000524926 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
BEST1-204ENST00000524926 PTPRMP28827 1452 aa20.48■□□□□ 0.87
BEST1-204ENST00000524926 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
BEST1-204ENST00000524926 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
BEST1-204ENST00000524926 NSD3Q9BZ95 1437 aa20.46■□□□□ 0.87
BEST1-204ENST00000524926 SALL2Q9Y467 1007 aaPredicted RBP20.46■□□□□ 0.87
BEST1-204ENST00000524926 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
BEST1-204ENST00000524926 ADAMTS8Q9UP79 889 aa20.43■□□□□ 0.86
BEST1-204ENST00000524926 NUDCQ9Y266 331 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms