RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 TMEM131LA2VDJ0 1609 aa18.91■□□□□ 0.62
SWAP70-203ENST00000524817 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
SWAP70-203ENST00000524817 EID1Q9Y6B2 187 aa18.9■□□□□ 0.62
SWAP70-203ENST00000524817 KIF1BO60333 1816 aa18.9■□□□□ 0.62
SWAP70-203ENST00000524817 RIMS2Q9UQ26 1411 aa18.9■□□□□ 0.62
SWAP70-203ENST00000524817 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
SWAP70-203ENST00000524817 SPATA31E1Q6ZUB1 1445 aa18.89■□□□□ 0.61
SWAP70-203ENST00000524817 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
SWAP70-203ENST00000524817 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
SWAP70-203ENST00000524817 CFAP70Q5T0N1 1121 aa18.86■□□□□ 0.61
SWAP70-203ENST00000524817 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
SWAP70-203ENST00000524817 STK26Q9P289 416 aa18.84■□□□□ 0.61
SWAP70-203ENST00000524817 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
SWAP70-203ENST00000524817 NBPF1Q3BBV0 1214 aa18.82■□□□□ 0.6
SWAP70-203ENST00000524817 ZFYVE9O95405 1425 aa18.8■□□□□ 0.6
SWAP70-203ENST00000524817 ZNF142P52746 1687 aaPredicted RBP18.8■□□□□ 0.6
SWAP70-203ENST00000524817 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
SWAP70-203ENST00000524817 SCAF11Q99590 1463 aaKnown RBP18.79■□□□□ 0.6
SWAP70-203ENST00000524817 HDGFP51858 240 aaKnown RBP18.79■□□□□ 0.6
SWAP70-203ENST00000524817 SAFB2Q14151 953 aaKnown RBP eCLIP18.78■□□□□ 0.6
SWAP70-203ENST00000524817 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.78■□□□□ 0.6
SWAP70-203ENST00000524817 STRCQ7RTU9 1775 aa18.77■□□□□ 0.6
SWAP70-203ENST00000524817 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
SWAP70-203ENST00000524817 ZNF335Q9H4Z2 1342 aaPredicted RBP18.77■□□□□ 0.59
SWAP70-203ENST00000524817 NPHP4O75161 1426 aaPredicted RBP18.75■□□□□ 0.59
SWAP70-203ENST00000524817 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
SWAP70-203ENST00000524817 ARHGAP23Q9P227 1491 aa18.75■□□□□ 0.59
SWAP70-203ENST00000524817 SLIT1O75093 1534 aa18.74■□□□□ 0.59
SWAP70-203ENST00000524817 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
SWAP70-203ENST00000524817 METP08581 1390 aa18.74■□□□□ 0.59
SWAP70-203ENST00000524817 PPLO60437 1756 aa18.73■□□□□ 0.59
SWAP70-203ENST00000524817 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
SWAP70-203ENST00000524817 NEURL4Q96JN8 1562 aa18.72■□□□□ 0.59
SWAP70-203ENST00000524817 PLEKHG1Q9ULL1 1385 aa18.7■□□□□ 0.58
SWAP70-203ENST00000524817 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
SWAP70-203ENST00000524817 KCNA6P17658 529 aa18.69■□□□□ 0.58
SWAP70-203ENST00000524817 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
SWAP70-203ENST00000524817 WAPLQ7Z5K2 1190 aa18.68■□□□□ 0.58
SWAP70-203ENST00000524817 AMOTL2Q9Y2J4 779 aa18.68■□□□□ 0.58
SWAP70-203ENST00000524817 C14orf93Q9H972 538 aaKnown RBP18.68■□□□□ 0.58
SWAP70-203ENST00000524817 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
SWAP70-203ENST00000524817 PRAG1Q86YV5 1406 aa18.67■□□□□ 0.58
SWAP70-203ENST00000524817 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
SWAP70-203ENST00000524817 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
SWAP70-203ENST00000524817 CARD11Q9BXL7 1154 aa18.66■□□□□ 0.58
SWAP70-203ENST00000524817 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
SWAP70-203ENST00000524817 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
SWAP70-203ENST00000524817 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
SWAP70-203ENST00000524817 ALKQ9UM73 1620 aa18.65■□□□□ 0.58
SWAP70-203ENST00000524817 TBX22Q9Y458 520 aa18.64■□□□□ 0.57
SWAP70-203ENST00000524817 NRXN3Q9Y4C0 1643 aa18.64■□□□□ 0.57
SWAP70-203ENST00000524817 PTPRUQ92729 1446 aa18.64■□□□□ 0.57
SWAP70-203ENST00000524817 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
SWAP70-203ENST00000524817 C14orf37Q86TY3 774 aa18.63■□□□□ 0.57
SWAP70-203ENST00000524817 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
SWAP70-203ENST00000524817 MED14O60244 1454 aa18.61■□□□□ 0.57
SWAP70-203ENST00000524817 MYOM2P54296 1465 aa18.61■□□□□ 0.57
SWAP70-203ENST00000524817 PRAM1Q96QH2 718 aa18.6■□□□□ 0.57
SWAP70-203ENST00000524817 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
SWAP70-203ENST00000524817 POGKQ9P215 609 aa18.58■□□□□ 0.57
SWAP70-203ENST00000524817 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.57
SWAP70-203ENST00000524817 MINK1Q8N4C8 1332 aaPredicted RBP18.58■□□□□ 0.56
SWAP70-203ENST00000524817 NRXN1Q9ULB1 1477 aa18.57■□□□□ 0.56
SWAP70-203ENST00000524817 ROBO2Q9HCK4 1378 aa18.57■□□□□ 0.56
SWAP70-203ENST00000524817 TIMELESSQ9UNS1 1208 aa18.57■□□□□ 0.56
SWAP70-203ENST00000524817 SETBP1Q9Y6X0 1596 aa18.56■□□□□ 0.56
SWAP70-203ENST00000524817 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
SWAP70-203ENST00000524817 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
SWAP70-203ENST00000524817 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
SWAP70-203ENST00000524817 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
SWAP70-203ENST00000524817 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
SWAP70-203ENST00000524817 TMEM94Q12767 1356 aa18.52■□□□□ 0.56
SWAP70-203ENST00000524817 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.56
SWAP70-203ENST00000524817 SETD1AO15047 1707 aaKnown RBP18.51■□□□□ 0.55
SWAP70-203ENST00000524817 ADGRB1O14514 1584 aa18.51■□□□□ 0.55
SWAP70-203ENST00000524817 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
SWAP70-203ENST00000524817 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
SWAP70-203ENST00000524817 LRPPRCP42704 1394 aaKnown RBP18.49■□□□□ 0.55
SWAP70-203ENST00000524817 USP47Q96K76 1375 aa18.48■□□□□ 0.55
SWAP70-203ENST00000524817 CHD2O14647 1828 aaKnown RBP18.48■□□□□ 0.55
SWAP70-203ENST00000524817 RALGAPBQ86X10 1494 aa18.47■□□□□ 0.55
SWAP70-203ENST00000524817 PIP4K2BP78356 416 aa18.46■□□□□ 0.55
SWAP70-203ENST00000524817 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
SWAP70-203ENST00000524817 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
SWAP70-203ENST00000524817 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
SWAP70-203ENST00000524817 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
SWAP70-203ENST00000524817 CABP2Q9NPB3 220 aa18.44■□□□□ 0.54
SWAP70-203ENST00000524817 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
SWAP70-203ENST00000524817 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
SWAP70-203ENST00000524817 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
SWAP70-203ENST00000524817 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
SWAP70-203ENST00000524817 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
SWAP70-203ENST00000524817 CERKQ8TCT0 537 aa18.41■□□□□ 0.54
SWAP70-203ENST00000524817 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
SWAP70-203ENST00000524817 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
SWAP70-203ENST00000524817 C11orf95C9JLR9 678 aaPredicted RBP18.41■□□□□ 0.54
SWAP70-203ENST00000524817 LAMC1P11047 1609 aa18.4■□□□□ 0.54
SWAP70-203ENST00000524817 GPRASP1Q5JY77 1395 aa18.4■□□□□ 0.54
SWAP70-203ENST00000524817 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.54
SWAP70-203ENST00000524817 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms