RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-239ENST00000523685 PTGDRQ13258 359 aa9.03□□□□□ -0.96
CTNNA1-239ENST00000523685 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
CTNNA1-239ENST00000523685 LHX6Q9UPM6 363 aa9.03□□□□□ -0.96
CTNNA1-239ENST00000523685 ASXL2Q76L83 1435 aa9.03□□□□□ -0.96
CTNNA1-239ENST00000523685 ABCC2Q92887 1545 aa9.02□□□□□ -0.97
CTNNA1-239ENST00000523685 PSDA5PKW4 1024 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-239ENST00000523685 MINK1Q8N4C8 1332 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-239ENST00000523685 IQGAP2Q13576 1575 aa9□□□□□ -0.97
CTNNA1-239ENST00000523685 TSR1Q2NL82 804 aaKnown RBP9□□□□□ -0.97
CTNNA1-239ENST00000523685 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
CTNNA1-239ENST00000523685 CDHR5Q9HBB8 845 aa9□□□□□ -0.97
CTNNA1-239ENST00000523685 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
CTNNA1-239ENST00000523685 PLB1Q6P1J6 1458 aa9□□□□□ -0.97
CTNNA1-239ENST00000523685 UACAQ9BZF9 1416 aa8.99□□□□□ -0.97
CTNNA1-239ENST00000523685 MAP2K5Q13163 448 aa8.99□□□□□ -0.97
CTNNA1-239ENST00000523685 IRF6O14896 467 aa8.98□□□□□ -0.97
CTNNA1-239ENST00000523685 FECHP22830 423 aa8.98□□□□□ -0.97
CTNNA1-239ENST00000523685 PPP4R3BQ5MIZ7 849 aa8.98□□□□□ -0.97
CTNNA1-239ENST00000523685 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
CTNNA1-239ENST00000523685 DISP1Q96F81 1524 aa8.97□□□□□ -0.97
CTNNA1-239ENST00000523685 BRPF1P55201 1214 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-239ENST00000523685 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
CTNNA1-239ENST00000523685 UHRF1BP1LA0JNW5 1464 aa8.96□□□□□ -0.97
CTNNA1-239ENST00000523685 TRIM66O15016 1216 aa8.96□□□□□ -0.98
CTNNA1-239ENST00000523685 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
CTNNA1-239ENST00000523685 RAPGEF2Q9Y4G8 1499 aa8.96□□□□□ -0.98
CTNNA1-239ENST00000523685 ADGRL1O94910 1474 aa8.95□□□□□ -0.98
CTNNA1-239ENST00000523685 EPRSP07814 1512 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-239ENST00000523685 GLI2P10070 1586 aa8.95□□□□□ -0.98
CTNNA1-239ENST00000523685 CCDC102AQ96A19 550 aa8.94□□□□□ -0.98
CTNNA1-239ENST00000523685 KCNH8Q96L42 1107 aa8.94□□□□□ -0.98
CTNNA1-239ENST00000523685 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
CTNNA1-239ENST00000523685 COL17A1Q9UMD9 1497 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-239ENST00000523685 UGGT2Q9NYU1 1516 aa8.93□□□□□ -0.98
CTNNA1-239ENST00000523685 KDM5BQ9UGL1 1544 aa8.93□□□□□ -0.98
CTNNA1-239ENST00000523685 PPRC1Q5VV67 1664 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-239ENST00000523685 KIAA0556O60303 1618 aa8.92□□□□□ -0.98
CTNNA1-239ENST00000523685 ARID3CA6NKF2 412 aa8.92□□□□□ -0.98
CTNNA1-239ENST00000523685 PDE4DQ08499 809 aa8.92□□□□□ -0.98
CTNNA1-239ENST00000523685 ZCCHC11Q5TAX3 1644 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-239ENST00000523685 TEX14Q8IWB6 1497 aa8.91□□□□□ -0.98
CTNNA1-239ENST00000523685 ST18O60284 1047 aa8.91□□□□□ -0.98
CTNNA1-239ENST00000523685 PTPREP23469 700 aa8.91□□□□□ -0.98
CTNNA1-239ENST00000523685 WDR7Q9Y4E6 1490 aa8.9□□□□□ -0.98
CTNNA1-239ENST00000523685 MAP3K4Q9Y6R4 1608 aa8.9□□□□□ -0.99
CTNNA1-239ENST00000523685 ERBB3P21860 1342 aa8.89□□□□□ -0.99
CTNNA1-239ENST00000523685 PRSS12P56730 875 aa8.89□□□□□ -0.99
CTNNA1-239ENST00000523685 RBM27Q9P2N5 1060 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-239ENST00000523685 COL9A1P20849 921 aa8.88□□□□□ -0.99
CTNNA1-239ENST00000523685 AMHR2Q16671 573 aa8.88□□□□□ -0.99
CTNNA1-239ENST00000523685 TMEM132AQ24JP5 1023 aa8.88□□□□□ -0.99
CTNNA1-239ENST00000523685 PADI6Q6TGC4 694 aa8.88□□□□□ -0.99
CTNNA1-239ENST00000523685 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-239ENST00000523685 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
CTNNA1-239ENST00000523685 CD109Q6YHK3 1445 aa8.88□□□□□ -0.99
CTNNA1-239ENST00000523685 PPP1R3GB7ZBB8 358 aa8.87□□□□□ -0.99
CTNNA1-239ENST00000523685 TTC13Q8NBP0 860 aa8.87□□□□□ -0.99
CTNNA1-239ENST00000523685 GPBP1L1Q9HC44 474 aaPredicted RBP8.87□□□□□ -0.99
CTNNA1-239ENST00000523685 GOLGA3Q08378 1498 aa8.87□□□□□ -0.99
CTNNA1-239ENST00000523685 OATP04181 439 aa8.86□□□□□ -0.99
CTNNA1-239ENST00000523685 EMP3P54852 163 aa8.86□□□□□ -0.99
CTNNA1-239ENST00000523685 VARS2Q5ST30 1063 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-239ENST00000523685 FAM9AQ8IZU1 332 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-239ENST00000523685 MARVELD3Q96A59 401 aa8.85□□□□□ -0.99
CTNNA1-239ENST00000523685 KDM4CQ9H3R0 1056 aa8.85□□□□□ -0.99
CTNNA1-239ENST00000523685 ABCA8O94911 1581 aa8.84□□□□□ -0.99
CTNNA1-239ENST00000523685 RANGAP1P46060 587 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-239ENST00000523685 FAM161AQ3B820 660 aa8.84□□□□□ -0.99
CTNNA1-239ENST00000523685 KCNK17Q96T54 332 aa8.84□□□□□ -0.99
CTNNA1-239ENST00000523685 HECW2Q9P2P5 1572 aa8.84□□□□□ -0.99
CTNNA1-239ENST00000523685 ADGRG1Q9Y653 693 aa8.84□□□□□ -0.99
CTNNA1-239ENST00000523685 CTTNBP2Q8WZ74 1663 aa8.84□□□□□ -0.99
CTNNA1-239ENST00000523685 MAGI3Q5TCQ9 1506 aa8.83□□□□□ -1
CTNNA1-239ENST00000523685 FAM205CA6NFA0 338 aa8.82□□□□□ -1
CTNNA1-239ENST00000523685 TTLL12Q14166 644 aaPredicted RBP8.82□□□□□ -1
CTNNA1-239ENST00000523685 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
CTNNA1-239ENST00000523685 PARP9Q8IXQ6 854 aa8.82□□□□□ -1
CTNNA1-239ENST00000523685 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
CTNNA1-239ENST00000523685 FAM198AQ9UFP1 575 aa8.82□□□□□ -1
CTNNA1-239ENST00000523685 PRXQ9BXM0 1461 aa8.82□□□□□ -1
CTNNA1-239ENST00000523685 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
CTNNA1-239ENST00000523685 ARHGAP33O14559 1287 aa8.81□□□□□ -1
CTNNA1-239ENST00000523685 RBM46Q8TBY0 533 aaKnown RBP8.81□□□□□ -1
CTNNA1-239ENST00000523685 PXYLP1Q8TE99 480 aa8.81□□□□□ -1
CTNNA1-239ENST00000523685 PHOX2BQ99453 314 aa8.81□□□□□ -1
CTNNA1-239ENST00000523685 TSKSQ9UJT2 592 aa8.81□□□□□ -1
CTNNA1-239ENST00000523685 CFAP43Q8NDM7 1665 aa8.81□□□□□ -1
CTNNA1-239ENST00000523685 ONECUT3O60422 494 aaPredicted RBP8.8□□□□□ -1
CTNNA1-239ENST00000523685 PSEN2P49810 448 aa8.8□□□□□ -1
CTNNA1-239ENST00000523685 PACS2Q86VP3 889 aa8.8□□□□□ -1
CTNNA1-239ENST00000523685 ATP10BO94823 1461 aa8.79□□□□□ -1
CTNNA1-239ENST00000523685 RAPGEF3O95398 923 aa8.79□□□□□ -1
CTNNA1-239ENST00000523685 CLCN1P35523 988 aa8.79□□□□□ -1
CTNNA1-239ENST00000523685 PBX2P40425 430 aa8.79□□□□□ -1
CTNNA1-239ENST00000523685 ZNF687Q8N1G0 1237 aa8.79□□□□□ -1
CTNNA1-239ENST00000523685 IL27Q8NEV9 243 aa8.79□□□□□ -1
CTNNA1-239ENST00000523685 ARID4BQ4LE39 1312 aaPredicted RBP8.79□□□□□ -1
CTNNA1-239ENST00000523685 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
CTNNA1-239ENST00000523685 PROX2Q3B8N5 592 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms