RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 TRHP20396 242 aaPredicted RBP28.95■■■□□ 2.23
SQLE-206ENST00000523430 PPP6R1Q9UPN7 881 aa28.94■■■□□ 2.22
SQLE-206ENST00000523430 ARID4BQ4LE39 1312 aaPredicted RBP28.92■■■□□ 2.22
SQLE-206ENST00000523430 FBXO31Q5XUX0 539 aaPredicted RBP28.91■■■□□ 2.22
SQLE-206ENST00000523430 POLR3GLQ9BT43 218 aa28.91■■■□□ 2.22
SQLE-206ENST00000523430 NEXMIFQ5QGS0 1516 aa28.9■■■□□ 2.22
SQLE-206ENST00000523430 IDI1Q13907 227 aa28.89■■■□□ 2.22
SQLE-206ENST00000523430 SCAF11Q99590 1463 aaKnown RBP28.88■■■□□ 2.21
SQLE-206ENST00000523430 TMEM131LA2VDJ0 1609 aa28.88■■■□□ 2.21
SQLE-206ENST00000523430 PIK3C2GO75747 1445 aa28.88■■■□□ 2.21
SQLE-206ENST00000523430 MYO5BQ9ULV0 1848 aa28.87■■■□□ 2.21
SQLE-206ENST00000523430 SLC52A1Q9NWF4 448 aa28.87■■■□□ 2.21
SQLE-206ENST00000523430 SPATA31D1Q6ZQQ2 1576 aa28.87■■■□□ 2.21
SQLE-206ENST00000523430 CFAP70Q5T0N1 1121 aa28.86■■■□□ 2.21
SQLE-206ENST00000523430 TESK2Q96S53 571 aa28.85■■■□□ 2.21
SQLE-206ENST00000523430 DNAJC5Q9H3Z4 198 aa28.85■■■□□ 2.21
SQLE-206ENST00000523430 RPGRIP1LQ68CZ1 1315 aa28.85■■■□□ 2.21
SQLE-206ENST00000523430 DISP3Q9P2K9 1392 aa28.82■■■□□ 2.2
SQLE-206ENST00000523430 CENPBP07199 599 aaPredicted RBP28.82■■■□□ 2.2
SQLE-206ENST00000523430 CCER2I3L3R5 266 aa28.81■■■□□ 2.2
SQLE-206ENST00000523430 SETBP1Q9Y6X0 1596 aa28.81■■■□□ 2.2
SQLE-206ENST00000523430 NUTM2DQ5VT03 806 aaPredicted RBP28.76■■■□□ 2.2
SQLE-206ENST00000523430 ADGRB1O14514 1584 aa28.76■■■□□ 2.19
SQLE-206ENST00000523430 ZMYM3Q14202 1370 aa28.76■■■□□ 2.19
SQLE-206ENST00000523430 EIF3AQ14152 1382 aaKnown RBP28.75■■■□□ 2.19
SQLE-206ENST00000523430 ESF1Q9H501 851 aaKnown RBP28.75■■■□□ 2.19
SQLE-206ENST00000523430 C14orf93Q9H972 538 aaKnown RBP28.72■■■□□ 2.19
SQLE-206ENST00000523430 ZFYVE9O95405 1425 aa28.71■■■□□ 2.19
SQLE-206ENST00000523430 MYO3AQ8NEV4 1616 aa28.71■■■□□ 2.19
SQLE-206ENST00000523430 TMF1P82094 1093 aa28.71■■■□□ 2.19
SQLE-206ENST00000523430 PRKRIP1Q9H875 184 aaPredicted RBP28.71■■■□□ 2.19
SQLE-206ENST00000523430 VGFO15240 615 aaPredicted RBP28.7■■■□□ 2.18
SQLE-206ENST00000523430 A2ML1A8K2U0 1454 aa28.68■■■□□ 2.18
SQLE-206ENST00000523430 STAG3Q9UJ98 1225 aa28.64■■■□□ 2.18
SQLE-206ENST00000523430 ASXL1Q8IXJ9 1541 aa28.64■■■□□ 2.17
SQLE-206ENST00000523430 TMEM132EQ6IEE7 984 aa28.63■■■□□ 2.17
SQLE-206ENST00000523430 TNRQ92752 1358 aa28.61■■■□□ 2.17
SQLE-206ENST00000523430 FER1L4A9Z1Z3 1794 aa28.61■■■□□ 2.17
SQLE-206ENST00000523430 SENP3Q9H4L4 574 aaPredicted RBP28.59■■■□□ 2.17
SQLE-206ENST00000523430 QRICH2Q9H0J4 1663 aa28.59■■■□□ 2.17
SQLE-206ENST00000523430 ARHGEF28Q8N1W1 1705 aaKnown RBP28.58■■■□□ 2.17
SQLE-206ENST00000523430 KDM5AP29375 1690 aaKnown RBP28.58■■■□□ 2.17
SQLE-206ENST00000523430 TRAK1Q9UPV9 953 aa28.58■■■□□ 2.17
SQLE-206ENST00000523430 MYOM1P52179 1685 aa28.58■■■□□ 2.17
SQLE-206ENST00000523430 CNGB1Q14028 1251 aaPredicted RBP28.57■■■□□ 2.16
SQLE-206ENST00000523430 C3P01024 1663 aa28.57■■■□□ 2.16
SQLE-206ENST00000523430 CCDC184Q52MB2 194 aa28.57■■■□□ 2.16
SQLE-206ENST00000523430 RIMS2Q9UQ26 1411 aa28.57■■■□□ 2.16
SQLE-206ENST00000523430 SBNO2Q9Y2G9 1366 aa28.55■■■□□ 2.16
SQLE-206ENST00000523430 CENPJQ9HC77 1338 aaPredicted RBP28.55■■■□□ 2.16
SQLE-206ENST00000523430 ALKQ9UM73 1620 aa28.53■■■□□ 2.16
SQLE-206ENST00000523430 UBR1Q8IWV7 1749 aa28.53■■■□□ 2.16
SQLE-206ENST00000523430 CDCA8Q53HL2 280 aa28.51■■■□□ 2.15
SQLE-206ENST00000523430 CEBPAP49715 358 aaPredicted RBP28.5■■■□□ 2.15
SQLE-206ENST00000523430 PANK3Q9H999 370 aa28.49■■■□□ 2.15
SQLE-206ENST00000523430 PER1O15534 1290 aaPredicted RBP28.49■■■□□ 2.15
SQLE-206ENST00000523430 SETD1AO15047 1707 aaKnown RBP28.48■■■□□ 2.15
SQLE-206ENST00000523430 NRXN3Q9Y4C0 1643 aa28.47■■■□□ 2.15
SQLE-206ENST00000523430 MRS2Q9HD23 443 aa28.46■■■□□ 2.15
SQLE-206ENST00000523430 PTPRMP28827 1452 aa28.46■■■□□ 2.15
SQLE-206ENST00000523430 NLRP1Q9C000 1473 aa28.46■■■□□ 2.15
SQLE-206ENST00000523430 SLC24A1O60721 1099 aa28.44■■■□□ 2.14
SQLE-206ENST00000523430 YTHDC2Q9H6S0 1430 aaKnown RBP28.44■■■□□ 2.14
SQLE-206ENST00000523430 KTN1Q86UP2 1357 aaKnown RBP28.42■■■□□ 2.14
SQLE-206ENST00000523430 STK26Q9P289 416 aa28.41■■■□□ 2.14
SQLE-206ENST00000523430 TULP4Q9NRJ4 1543 aa28.41■■■□□ 2.14
SQLE-206ENST00000523430 PARD3Q8TEW0 1356 aa28.41■■■□□ 2.14
SQLE-206ENST00000523430 PLPPR3Q6T4P5 718 aa28.4■■■□□ 2.14
SQLE-206ENST00000523430 TMEM2Q9UHN6 1383 aa28.4■■■□□ 2.14
SQLE-206ENST00000523430 SCAF1Q9H7N4 1312 aaKnown RBP28.4■■■□□ 2.14
SQLE-206ENST00000523430 RIMS1Q86UR5 1692 aaKnown RBP28.38■■■□□ 2.13
SQLE-206ENST00000523430 RALBP1Q15311 655 aa28.38■■■□□ 2.13
SQLE-206ENST00000523430 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.38■■■□□ 2.13
SQLE-206ENST00000523430 MYBBP1AQ9BQG0 1328 aaKnown RBP28.36■■■□□ 2.13
SQLE-206ENST00000523430 CC2D1BQ5T0F9 858 aaKnown RBP28.34■■■□□ 2.13
SQLE-206ENST00000523430 SAFB2Q14151 953 aaKnown RBP eCLIP28.34■■■□□ 2.13
SQLE-206ENST00000523430 FAM9BQ8IZU0 186 aa28.32■■■□□ 2.12
SQLE-206ENST00000523430 DLC1Q96QB1 1528 aa28.31■■■□□ 2.12
SQLE-206ENST00000523430 ADAMTSL3P82987 1691 aa28.3■■■□□ 2.12
SQLE-206ENST00000523430 PRAM1Q96QH2 718 aa28.3■■■□□ 2.12
SQLE-206ENST00000523430 LRPPRCP42704 1394 aaKnown RBP28.29■■■□□ 2.12
SQLE-206ENST00000523430 KNSTRNQ9Y448 316 aa28.29■■■□□ 2.12
SQLE-206ENST00000523430 METP08581 1390 aa28.29■■■□□ 2.12
SQLE-206ENST00000523430 EVC2Q86UK5 1308 aa28.28■■■□□ 2.12
SQLE-206ENST00000523430 HDGFP51858 240 aaKnown RBP28.27■■■□□ 2.12
SQLE-206ENST00000523430 HNRNPUQ00839 825 aaKnown RBP eCLIP28.27■■■□□ 2.12
SQLE-206ENST00000523430 BRD4O60885 1362 aaPredicted RBP28.27■■■□□ 2.12
SQLE-206ENST00000523430 AMER1Q5JTC6 1135 aaPredicted RBP28.27■■■□□ 2.12
SQLE-206ENST00000523430 GTF3C3Q9Y5Q9 886 aa28.27■■■□□ 2.12
SQLE-206ENST00000523430 SLIT1O75093 1534 aa28.27■■■□□ 2.12
SQLE-206ENST00000523430 ARHGAP23Q9P227 1491 aa28.26■■■□□ 2.11
SQLE-206ENST00000523430 KNDC1Q76NI1 1749 aa28.24■■■□□ 2.11
SQLE-206ENST00000523430 LTKP29376 864 aa28.24■■■□□ 2.11
SQLE-206ENST00000523430 POGKQ9P215 609 aa28.24■■■□□ 2.11
SQLE-206ENST00000523430 ADAMTS13Q76LX8 1427 aa28.24■■■□□ 2.11
SQLE-206ENST00000523430 TMC1Q8TDI8 760 aa28.23■■■□□ 2.11
SQLE-206ENST00000523430 PLEKHG1Q9ULL1 1385 aa28.23■■■□□ 2.11
SQLE-206ENST00000523430 MINK1Q8N4C8 1332 aaPredicted RBP28.23■■■□□ 2.11
SQLE-206ENST00000523430 NLRP13Q86W25 1043 aa28.23■■■□□ 2.11
SQLE-206ENST00000523430 CEP170BQ9Y4F5 1589 aaPredicted RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms