RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 TRPM2O94759 1503 aa33.56■■■□□ 2.96
HDAC2-214ENST00000523240 ACIN1Q9UKV3 1341 aaKnown RBP33.54■■■□□ 2.96
HDAC2-214ENST00000523240 KIF1BO60333 1816 aa33.53■■■□□ 2.96
HDAC2-214ENST00000523240 CLTCL1P53675 1640 aa33.53■■■□□ 2.96
HDAC2-214ENST00000523240 ZFYVE9O95405 1425 aa33.53■■■□□ 2.96
HDAC2-214ENST00000523240 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.52■■■□□ 2.96
HDAC2-214ENST00000523240 ZNF326Q5BKZ1 582 aaKnown RBP33.48■■■□□ 2.95
HDAC2-214ENST00000523240 STRCP1A6NGW2 1772 aa33.47■■■□□ 2.95
HDAC2-214ENST00000523240 SENP3Q9H4L4 574 aaPredicted RBP33.47■■■□□ 2.95
HDAC2-214ENST00000523240 SLC26A8Q96RN1 970 aa33.46■■■□□ 2.95
HDAC2-214ENST00000523240 PLEKHG1Q9ULL1 1385 aa33.46■■■□□ 2.95
HDAC2-214ENST00000523240 RAB3GAP2Q9H2M9 1393 aa33.45■■■□□ 2.94
HDAC2-214ENST00000523240 MPHOSPH9Q99550 1183 aa33.44■■■□□ 2.94
HDAC2-214ENST00000523240 NUTM2DQ5VT03 806 aaPredicted RBP33.43■■■□□ 2.94
HDAC2-214ENST00000523240 FOXD1Q16676 465 aa33.41■■■□□ 2.94
HDAC2-214ENST00000523240 UBAP1LF5GYI3 381 aa33.4■■■□□ 2.94
HDAC2-214ENST00000523240 LRRC7Q96NW7 1537 aa33.35■■■□□ 2.93
HDAC2-214ENST00000523240 CCDC144AA2RUR9 1427 aa33.33■■■□□ 2.93
HDAC2-214ENST00000523240 DIP2AQ14689 1571 aa33.32■■■□□ 2.92
HDAC2-214ENST00000523240 KCNA6P17658 529 aa33.31■■■□□ 2.92
HDAC2-214ENST00000523240 NEXMIFQ5QGS0 1516 aa33.3■■■□□ 2.92
HDAC2-214ENST00000523240 CHD2O14647 1828 aaKnown RBP33.28■■■□□ 2.92
HDAC2-214ENST00000523240 TOM1O60784 492 aa33.28■■■□□ 2.92
HDAC2-214ENST00000523240 TBX22Q9Y458 520 aa33.28■■■□□ 2.92
HDAC2-214ENST00000523240 NWD1Q149M9 1564 aa33.28■■■□□ 2.92
HDAC2-214ENST00000523240 SCAF1Q9H7N4 1312 aaKnown RBP33.27■■■□□ 2.92
HDAC2-214ENST00000523240 NKTRP30414 1462 aaKnown RBP33.25■■■□□ 2.91
HDAC2-214ENST00000523240 ADAMTS13Q76LX8 1427 aa33.25■■■□□ 2.91
HDAC2-214ENST00000523240 XIRP1Q702N8 1843 aaKnown RBP33.24■■■□□ 2.91
HDAC2-214ENST00000523240 PROSER2Q86WR7 435 aaPredicted RBP33.23■■■□□ 2.91
HDAC2-214ENST00000523240 SETBP1Q9Y6X0 1596 aa33.22■■■□□ 2.91
HDAC2-214ENST00000523240 PPLO60437 1756 aa33.2■■■□□ 2.91
HDAC2-214ENST00000523240 HRCP23327 699 aa33.2■■■□□ 2.91
HDAC2-214ENST00000523240 PIP4K2BP78356 416 aa33.2■■■□□ 2.91
HDAC2-214ENST00000523240 RPGRIP1LQ68CZ1 1315 aa33.2■■■□□ 2.91
HDAC2-214ENST00000523240 NRXN3Q9Y4C0 1643 aa33.2■■■□□ 2.9
HDAC2-214ENST00000523240 TMEM94Q12767 1356 aa33.19■■■□□ 2.9
HDAC2-214ENST00000523240 PIK3R4Q99570 1358 aa33.19■■■□□ 2.9
HDAC2-214ENST00000523240 VGFO15240 615 aaPredicted RBP33.18■■■□□ 2.9
HDAC2-214ENST00000523240 RGL3Q3MIN7 710 aa33.15■■■□□ 2.9
HDAC2-214ENST00000523240 RBM33Q96EV2 1170 aaKnown RBP33.12■■■□□ 2.89
HDAC2-214ENST00000523240 SPATA31E1Q6ZUB1 1445 aa33.1■■■□□ 2.89
HDAC2-214ENST00000523240 AMOTL2Q9Y2J4 779 aa33.08■■■□□ 2.89
HDAC2-214ENST00000523240 IFT172Q9UG01 1749 aa33.08■■■□□ 2.89
HDAC2-214ENST00000523240 MSH6P52701 1360 aa33.08■■■□□ 2.89
HDAC2-214ENST00000523240 C14orf37Q86TY3 774 aa33.07■■■□□ 2.88
HDAC2-214ENST00000523240 ALKQ9UM73 1620 aa33.06■■■□□ 2.88
HDAC2-214ENST00000523240 ANKRD30BQ9BXX2 1392 aa33.05■■■□□ 2.88
HDAC2-214ENST00000523240 PTPRUQ92729 1446 aa33.04■■■□□ 2.88
HDAC2-214ENST00000523240 XRN1Q8IZH2 1706 aaKnown RBP33.04■■■□□ 2.88
HDAC2-214ENST00000523240 METP08581 1390 aa33.03■■■□□ 2.88
HDAC2-214ENST00000523240 SETD1AO15047 1707 aaKnown RBP33■■■□□ 2.87
HDAC2-214ENST00000523240 NCOA3Q9Y6Q9 1424 aa32.99■■■□□ 2.87
HDAC2-214ENST00000523240 ADGRF5Q8IZF2 1346 aa32.96■■■□□ 2.87
HDAC2-214ENST00000523240 HSPA1LP34931 641 aa32.93■■■□□ 2.86
HDAC2-214ENST00000523240 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.91■■■□□ 2.86
HDAC2-214ENST00000523240 ATF3P18847 181 aa32.88■■■□□ 2.85
HDAC2-214ENST00000523240 C19orf44Q9H6X5 657 aa32.88■■■□□ 2.85
HDAC2-214ENST00000523240 MYOM2P54296 1465 aa32.87■■■□□ 2.85
HDAC2-214ENST00000523240 PIK3C2GO75747 1445 aa32.87■■■□□ 2.85
HDAC2-214ENST00000523240 ROBO1Q9Y6N7 1651 aa32.87■■■□□ 2.85
HDAC2-214ENST00000523240 TRIM26Q12899 539 aaPredicted RBP32.86■■■□□ 2.85
HDAC2-214ENST00000523240 CADPS2Q86UW7 1296 aa32.86■■■□□ 2.85
HDAC2-214ENST00000523240 PTCH1Q13635 1447 aa32.85■■■□□ 2.85
HDAC2-214ENST00000523240 FAM135BQ49AJ0 1406 aa32.85■■■□□ 2.85
HDAC2-214ENST00000523240 SLAIN2Q9P270 581 aa32.84■■■□□ 2.85
HDAC2-214ENST00000523240 LAMC1P11047 1609 aa32.83■■■□□ 2.85
HDAC2-214ENST00000523240 NALCNQ8IZF0 1738 aa32.8■■■□□ 2.84
HDAC2-214ENST00000523240 DCCP43146 1447 aa32.79■■■□□ 2.84
HDAC2-214ENST00000523240 ADGRL3Q9HAR2 1447 aa32.79■■■□□ 2.84
HDAC2-214ENST00000523240 NRXN1Q9ULB1 1477 aa32.79■■■□□ 2.84
HDAC2-214ENST00000523240 DCAF11Q8TEB1 546 aa32.78■■■□□ 2.84
HDAC2-214ENST00000523240 KDM2AQ9Y2K7 1162 aa32.78■■■□□ 2.84
HDAC2-214ENST00000523240 ROBO2Q9HCK4 1378 aa32.78■■■□□ 2.84
HDAC2-214ENST00000523240 STK26Q9P289 416 aa32.77■■■□□ 2.84
HDAC2-214ENST00000523240 PRAG1Q86YV5 1406 aa32.77■■■□□ 2.84
HDAC2-214ENST00000523240 TMEM132EQ6IEE7 984 aa32.75■■■□□ 2.83
HDAC2-214ENST00000523240 ASXL1Q8IXJ9 1541 aa32.75■■■□□ 2.83
HDAC2-214ENST00000523240 KNDC1Q76NI1 1749 aa32.74■■■□□ 2.83
HDAC2-214ENST00000523240 LRPPRCP42704 1394 aaKnown RBP32.73■■■□□ 2.83
HDAC2-214ENST00000523240 C14orf93Q9H972 538 aaKnown RBP32.73■■■□□ 2.83
HDAC2-214ENST00000523240 CFAP70Q5T0N1 1121 aa32.72■■■□□ 2.83
HDAC2-214ENST00000523240 STAC3Q96MF2 364 aa32.71■■■□□ 2.83
HDAC2-214ENST00000523240 PHLPP1O60346 1717 aa32.71■■■□□ 2.83
HDAC2-214ENST00000523240 YTHDC2Q9H6S0 1430 aaKnown RBP32.7■■■□□ 2.83
HDAC2-214ENST00000523240 DHX57Q6P158 1386 aaKnown RBP32.7■■■□□ 2.82
HDAC2-214ENST00000523240 DISP3Q9P2K9 1392 aa32.7■■■□□ 2.82
HDAC2-214ENST00000523240 TECPR2O15040 1411 aa32.68■■■□□ 2.82
HDAC2-214ENST00000523240 ABCC11Q96J66 1382 aa32.67■■■□□ 2.82
HDAC2-214ENST00000523240 MST1RQ04912 1400 aa32.65■■■□□ 2.82
HDAC2-214ENST00000523240 WAPLQ7Z5K2 1190 aa32.61■■■□□ 2.81
HDAC2-214ENST00000523240 MED1Q15648 1581 aaPredicted RBP32.6■■■□□ 2.81
HDAC2-214ENST00000523240 BRINP3Q76B58 766 aa32.59■■■□□ 2.81
HDAC2-214ENST00000523240 CDC42BPGQ6DT37 1551 aa32.58■■■□□ 2.81
HDAC2-214ENST00000523240 AHDC1Q5TGY3 1603 aaPredicted RBP32.57■■■□□ 2.8
HDAC2-214ENST00000523240 ADGRB1O14514 1584 aa32.55■■■□□ 2.8
HDAC2-214ENST00000523240 NEUROD1Q13562 356 aa32.55■■■□□ 2.8
HDAC2-214ENST00000523240 PLEKHH1Q9ULM0 1364 aa32.55■■■□□ 2.8
HDAC2-214ENST00000523240 COL16A1Q07092 1604 aaPredicted RBP32.54■■■□□ 2.8
HDAC2-214ENST00000523240 C1orf167Q5SNV9 1468 aa32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms