RNA–Protein interactions for RNA: ENST00000522297.1

POLB-212, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-212ENST00000522297 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
POLB-212ENST00000522297 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
POLB-212ENST00000522297 CLCN6P51797 869 aa13.52□□□□□ -0.25
POLB-212ENST00000522297 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.25
POLB-212ENST00000522297 MROH2AA6NES4 1674 aa13.52□□□□□ -0.25
POLB-212ENST00000522297 MAST1Q9Y2H9 1570 aa13.51□□□□□ -0.25
POLB-212ENST00000522297 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
POLB-212ENST00000522297 RNF25Q96BH1 459 aaPredicted RBP13.51□□□□□ -0.25
POLB-212ENST00000522297 TCOF1Q13428 1488 aaKnown RBP13.5□□□□□ -0.25
POLB-212ENST00000522297 DAPK1P53355 1430 aa13.5□□□□□ -0.25
POLB-212ENST00000522297 MAP3K13O43283 966 aa13.5□□□□□ -0.25
POLB-212ENST00000522297 PTPN23Q9H3S7 1636 aa13.5□□□□□ -0.25
POLB-212ENST00000522297 PTPRTO14522 1441 aa13.49□□□□□ -0.25
POLB-212ENST00000522297 NCOA1Q15788 1441 aa13.49□□□□□ -0.25
POLB-212ENST00000522297 TNRQ92752 1358 aa13.49□□□□□ -0.25
POLB-212ENST00000522297 STRCQ7RTU9 1775 aa13.48□□□□□ -0.25
POLB-212ENST00000522297 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
POLB-212ENST00000522297 ANKRD30AQ9BXX3 1397 aa13.47□□□□□ -0.25
POLB-212ENST00000522297 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
POLB-212ENST00000522297 ZNF467Q7Z7K2 595 aaPredicted RBP13.47□□□□□ -0.25
POLB-212ENST00000522297 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
POLB-212ENST00000522297 DUOX2Q9NRD8 1548 aa13.47□□□□□ -0.25
POLB-212ENST00000522297 PZPP20742 1482 aa13.47□□□□□ -0.25
POLB-212ENST00000522297 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
POLB-212ENST00000522297 CAMSAP1Q5T5Y3 1602 aa13.46□□□□□ -0.25
POLB-212ENST00000522297 A2ML1A8K2U0 1454 aa13.45□□□□□ -0.26
POLB-212ENST00000522297 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
POLB-212ENST00000522297 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
POLB-212ENST00000522297 ERBINQ96RT1 1412 aa13.44□□□□□ -0.26
POLB-212ENST00000522297 ABCC3O15438 1527 aa13.44□□□□□ -0.26
POLB-212ENST00000522297 TAOK2Q9UL54 1235 aa13.43□□□□□ -0.26
POLB-212ENST00000522297 CEP170BQ9Y4F5 1589 aaPredicted RBP13.43□□□□□ -0.26
POLB-212ENST00000522297 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
POLB-212ENST00000522297 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
POLB-212ENST00000522297 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
POLB-212ENST00000522297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
POLB-212ENST00000522297 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
POLB-212ENST00000522297 PLA2R1Q13018 1463 aa13.42□□□□□ -0.26
POLB-212ENST00000522297 ITGAEP38570 1179 aa13.41□□□□□ -0.26
POLB-212ENST00000522297 MYO3AQ8NEV4 1616 aa13.41□□□□□ -0.26
POLB-212ENST00000522297 KANK1Q14678 1352 aa13.41□□□□□ -0.26
POLB-212ENST00000522297 ZNF335Q9H4Z2 1342 aaPredicted RBP13.4□□□□□ -0.26
POLB-212ENST00000522297 MROH1Q8NDA8 1641 aa13.4□□□□□ -0.26
POLB-212ENST00000522297 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.26
POLB-212ENST00000522297 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
POLB-212ENST00000522297 MS4A3Q96HJ5 214 aa13.4□□□□□ -0.26
POLB-212ENST00000522297 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
POLB-212ENST00000522297 NLRP1Q9C000 1473 aa13.39□□□□□ -0.27
POLB-212ENST00000522297 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
POLB-212ENST00000522297 ADGRL2O95490 1459 aa13.38□□□□□ -0.27
POLB-212ENST00000522297 ERVK-7P63135 1459 aa13.38□□□□□ -0.27
POLB-212ENST00000522297 ANKRD50Q9ULJ7 1429 aa13.37□□□□□ -0.27
POLB-212ENST00000522297 CROCC2H7BZ55 1655 aa13.37□□□□□ -0.27
POLB-212ENST00000522297 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
POLB-212ENST00000522297 UGGT1Q9NYU2 1555 aa13.36□□□□□ -0.27
POLB-212ENST00000522297 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
POLB-212ENST00000522297 GALR2O43603 387 aaPredicted RBP13.35□□□□□ -0.27
POLB-212ENST00000522297 GABBR2O75899 941 aa13.35□□□□□ -0.27
POLB-212ENST00000522297 IDI1Q13907 227 aa13.35□□□□□ -0.27
POLB-212ENST00000522297 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
POLB-212ENST00000522297 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
POLB-212ENST00000522297 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
POLB-212ENST00000522297 ROCK1Q13464 1354 aa13.33□□□□□ -0.27
POLB-212ENST00000522297 LTKP29376 864 aa13.33□□□□□ -0.28
POLB-212ENST00000522297 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
POLB-212ENST00000522297 ZC3H13Q5T200 1668 aaKnown RBP13.33□□□□□ -0.28
POLB-212ENST00000522297 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
POLB-212ENST00000522297 CEP152O94986 1710 aa13.31□□□□□ -0.28
POLB-212ENST00000522297 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
POLB-212ENST00000522297 PSEN1P49768 467 aa13.31□□□□□ -0.28
POLB-212ENST00000522297 VWDEQ8N2E2 1590 aa13.31□□□□□ -0.28
POLB-212ENST00000522297 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
POLB-212ENST00000522297 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
POLB-212ENST00000522297 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
POLB-212ENST00000522297 SLC52A1Q9NWF4 448 aa13.3□□□□□ -0.28
POLB-212ENST00000522297 EID1Q9Y6B2 187 aa13.3□□□□□ -0.28
POLB-212ENST00000522297 CFAP65Q6ZU64 1925 aaKnown RBP13.3□□□□□ -0.28
POLB-212ENST00000522297 MED14O60244 1454 aa13.29□□□□□ -0.28
POLB-212ENST00000522297 UBAP1LF5GYI3 381 aa13.29□□□□□ -0.28
POLB-212ENST00000522297 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
POLB-212ENST00000522297 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
POLB-212ENST00000522297 NOS1P29475 1434 aa13.28□□□□□ -0.28
POLB-212ENST00000522297 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
POLB-212ENST00000522297 TIE1P35590 1138 aa13.27□□□□□ -0.29
POLB-212ENST00000522297 TRPC6Q9Y210 931 aa13.27□□□□□ -0.29
POLB-212ENST00000522297 NUP155O75694 1391 aa13.27□□□□□ -0.29
POLB-212ENST00000522297 CHGAP10645 457 aaKnown RBP13.26□□□□□ -0.29
POLB-212ENST00000522297 TMEM2Q9UHN6 1383 aa13.26□□□□□ -0.29
POLB-212ENST00000522297 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
POLB-212ENST00000522297 RRBP1Q9P2E9 1410 aaKnown RBP13.25□□□□□ -0.29
POLB-212ENST00000522297 STK25O00506 426 aa13.25□□□□□ -0.29
POLB-212ENST00000522297 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
POLB-212ENST00000522297 SCAF11Q99590 1463 aaKnown RBP13.24□□□□□ -0.29
POLB-212ENST00000522297 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
POLB-212ENST00000522297 MED1Q15648 1581 aaPredicted RBP13.23□□□□□ -0.29
POLB-212ENST00000522297 SLIT1O75093 1534 aa13.23□□□□□ -0.29
POLB-212ENST00000522297 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
POLB-212ENST00000522297 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
POLB-212ENST00000522297 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
POLB-212ENST00000522297 SYNMO15061 1565 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms