RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 CROCC2H7BZ55 1655 aa14.12□□□□□ -0.15
MRPS28-207ENST00000521434 IDI1Q13907 227 aa14.12□□□□□ -0.15
MRPS28-207ENST00000521434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.151e-8■■■□□ 15.2
MRPS28-207ENST00000521434 SLAIN2Q9P270 581 aa14.11□□□□□ -0.15
MRPS28-207ENST00000521434 KANK1Q14678 1352 aa14.1□□□□□ -0.15
MRPS28-207ENST00000521434 COL16A1Q07092 1604 aaPredicted RBP14.1□□□□□ -0.15
MRPS28-207ENST00000521434 CHD2O14647 1828 aaKnown RBP14.1□□□□□ -0.15
MRPS28-207ENST00000521434 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
MRPS28-207ENST00000521434 ADGRB3O60242 1522 aa14.09□□□□□ -0.15
MRPS28-207ENST00000521434 UPF1Q92900 1129 aaKnown RBP eCLIP14.08□□□□□ -0.16
MRPS28-207ENST00000521434 LMTK2Q8IWU2 1503 aa14.08□□□□□ -0.16
MRPS28-207ENST00000521434 SPATA31A6Q5VVP1 1343 aa14.07□□□□□ -0.16
MRPS28-207ENST00000521434 ABCC5O15440 1437 aa14.07□□□□□ -0.16
MRPS28-207ENST00000521434 LRP6O75581 1613 aa14.06□□□□□ -0.16
MRPS28-207ENST00000521434 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
MRPS28-207ENST00000521434 BCANQ96GW7 911 aa14.06□□□□□ -0.16
MRPS28-207ENST00000521434 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
MRPS28-207ENST00000521434 NOS1P29475 1434 aa14.06□□□□□ -0.16
MRPS28-207ENST00000521434 FGD6Q6ZV73 1430 aa14.06□□□□□ -0.16
MRPS28-207ENST00000521434 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
MRPS28-207ENST00000521434 SRCAPQ6ZRS2 3230 aa14.05□□□□□ -0.16
MRPS28-207ENST00000521434 KANK4Q5T7N3 995 aaPredicted RBP14.05□□□□□ -0.16
MRPS28-207ENST00000521434 SHPRHQ149N8 1683 aa14.04□□□□□ -0.16
MRPS28-207ENST00000521434 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
MRPS28-207ENST00000521434 TRIM52Q96A61 297 aa14.04□□□□□ -0.16
MRPS28-207ENST00000521434 SLC52A1Q9NWF4 448 aa14.04□□□□□ -0.16
MRPS28-207ENST00000521434 PTPN23Q9H3S7 1636 aa14.04□□□□□ -0.16
MRPS28-207ENST00000521434 NCOA3Q9Y6Q9 1424 aa14.03□□□□□ -0.16
MRPS28-207ENST00000521434 AHDC1Q5TGY3 1603 aaPredicted RBP14.02□□□□□ -0.16
MRPS28-207ENST00000521434 PLEKHG1Q9ULL1 1385 aa14.02□□□□□ -0.17
MRPS28-207ENST00000521434 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
MRPS28-207ENST00000521434 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
MRPS28-207ENST00000521434 ZFYVE9O95405 1425 aa14.01□□□□□ -0.17
MRPS28-207ENST00000521434 DAPK1P53355 1430 aa14.01□□□□□ -0.17
MRPS28-207ENST00000521434 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
MRPS28-207ENST00000521434 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
MRPS28-207ENST00000521434 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
MRPS28-207ENST00000521434 CDK12Q9NYV4 1490 aaPredicted RBP13.99□□□□□ -0.17
MRPS28-207ENST00000521434 PPP1R15AO75807 674 aaPredicted RBP13.99□□□□□ -0.17
MRPS28-207ENST00000521434 RXRBP28702 533 aa13.99□□□□□ -0.17
MRPS28-207ENST00000521434 C14orf37Q86TY3 774 aa13.99□□□□□ -0.17
MRPS28-207ENST00000521434 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
MRPS28-207ENST00000521434 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
MRPS28-207ENST00000521434 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
MRPS28-207ENST00000521434 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
MRPS28-207ENST00000521434 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
MRPS28-207ENST00000521434 ATF3P18847 181 aa13.97□□□□□ -0.17
MRPS28-207ENST00000521434 C19orf44Q9H6X5 657 aa13.97□□□□□ -0.17
MRPS28-207ENST00000521434 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
MRPS28-207ENST00000521434 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
MRPS28-207ENST00000521434 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
MRPS28-207ENST00000521434 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
MRPS28-207ENST00000521434 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
MRPS28-207ENST00000521434 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
MRPS28-207ENST00000521434 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-207ENST00000521434 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-207ENST00000521434 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
MRPS28-207ENST00000521434 AFF2P51816 1311 aa13.92□□□□□ -0.18
MRPS28-207ENST00000521434 BRINP3Q76B58 766 aa13.92□□□□□ -0.18
MRPS28-207ENST00000521434 ADGRL2O95490 1459 aa13.92□□□□□ -0.18
MRPS28-207ENST00000521434 TRPM2O94759 1503 aa13.9□□□□□ -0.18
MRPS28-207ENST00000521434 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.18
MRPS28-207ENST00000521434 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.19
MRPS28-207ENST00000521434 DCCP43146 1447 aa13.9□□□□□ -0.19
MRPS28-207ENST00000521434 SETD5Q9C0A6 1442 aa13.9□□□□□ -0.19
MRPS28-207ENST00000521434 CHGAP10645 457 aaKnown RBP13.89□□□□□ -0.19
MRPS28-207ENST00000521434 RGS12O14924 1447 aa13.89□□□□□ -0.19
MRPS28-207ENST00000521434 ANKRD50Q9ULJ7 1429 aa13.89□□□□□ -0.19
MRPS28-207ENST00000521434 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
MRPS28-207ENST00000521434 APLP2Q06481 763 aa13.88□□□□□ -0.19
MRPS28-207ENST00000521434 NUTM2DQ5VT03 806 aaPredicted RBP13.88□□□□□ -0.19
MRPS28-207ENST00000521434 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
MRPS28-207ENST00000521434 QTRT2Q9H974 415 aaKnown RBP13.87□□□□□ -0.19
MRPS28-207ENST00000521434 E9PCH4 1651 aa13.87□□□□□ -0.19
MRPS28-207ENST00000521434 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
MRPS28-207ENST00000521434 EP400Q96L91 3159 aa13.86□□□□□ -0.19
MRPS28-207ENST00000521434 LRRC59Q96AG4 307 aaKnown RBP13.86□□□□□ -0.19
MRPS28-207ENST00000521434 UNC13BO14795 1591 aa13.86□□□□□ -0.19
MRPS28-207ENST00000521434 XRN1Q8IZH2 1706 aaKnown RBP13.86□□□□□ -0.19
MRPS28-207ENST00000521434 MST1RQ04912 1400 aa13.85□□□□□ -0.19
MRPS28-207ENST00000521434 LOC105371045A0A1W2PR82 267 aa13.85□□□□□ -0.19
MRPS28-207ENST00000521434 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
MRPS28-207ENST00000521434 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.2
MRPS28-207ENST00000521434 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
MRPS28-207ENST00000521434 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
MRPS28-207ENST00000521434 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
MRPS28-207ENST00000521434 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
MRPS28-207ENST00000521434 IQGAP3Q86VI3 1631 aa13.8□□□□□ -0.2
MRPS28-207ENST00000521434 NALCNQ8IZF0 1738 aa13.79□□□□□ -0.2
MRPS28-207ENST00000521434 FAM50AQ14320 339 aaKnown RBP13.79□□□□□ -0.2
MRPS28-207ENST00000521434 DDX17Q92841 729 aaKnown RBP13.79□□□□□ -0.2
MRPS28-207ENST00000521434 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
MRPS28-207ENST00000521434 ADAMTS2O95450 1211 aa13.78□□□□□ -0.2
MRPS28-207ENST00000521434 LAMC1P11047 1609 aa13.78□□□□□ -0.2
MRPS28-207ENST00000521434 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
MRPS28-207ENST00000521434 METP08581 1390 aa13.76□□□□□ -0.21
MRPS28-207ENST00000521434 USP21Q9UK80 565 aa13.76□□□□□ -0.21
MRPS28-207ENST00000521434 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-207ENST00000521434 SPHKAPQ2M3C7 1700 aa13.75□□□□□ -0.21
MRPS28-207ENST00000521434 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms