RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
SPARC-202ENST00000520687 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.21
SPARC-202ENST00000520687 LAMC1P11047 1609 aa13.71□□□□□ -0.22
SPARC-202ENST00000520687 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.22
SPARC-202ENST00000520687 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
SPARC-202ENST00000520687 ALKQ9UM73 1620 aa13.7□□□□□ -0.22
SPARC-202ENST00000520687 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
SPARC-202ENST00000520687 TET3O43151 1660 aa13.7□□□□□ -0.22
SPARC-202ENST00000520687 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
SPARC-202ENST00000520687 KDM2AQ9Y2K7 1162 aa13.7□□□□□ -0.22
SPARC-202ENST00000520687 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
SPARC-202ENST00000520687 TRPM2O94759 1503 aa13.69□□□□□ -0.22
SPARC-202ENST00000520687 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
SPARC-202ENST00000520687 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
SPARC-202ENST00000520687 CEP170BQ9Y4F5 1589 aaPredicted RBP13.69□□□□□ -0.22
SPARC-202ENST00000520687 MYT1Q01538 1121 aa13.69□□□□□ -0.22
SPARC-202ENST00000520687 MYO3AQ8NEV4 1616 aa13.69□□□□□ -0.22
SPARC-202ENST00000520687 A2MP01023 1474 aa13.69□□□□□ -0.22
SPARC-202ENST00000520687 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
SPARC-202ENST00000520687 LMTK2Q8IWU2 1503 aa13.67□□□□□ -0.22
SPARC-202ENST00000520687 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
SPARC-202ENST00000520687 MROH1Q8NDA8 1641 aa13.66□□□□□ -0.22
SPARC-202ENST00000520687 KIF3BO15066 747 aa13.66□□□□□ -0.22
SPARC-202ENST00000520687 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
SPARC-202ENST00000520687 UPF1Q92900 1129 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPARC-202ENST00000520687 E9PCH4 1651 aa13.66□□□□□ -0.22
SPARC-202ENST00000520687 SPHKAPQ2M3C7 1700 aa13.65□□□□□ -0.22
SPARC-202ENST00000520687 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
SPARC-202ENST00000520687 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
SPARC-202ENST00000520687 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
SPARC-202ENST00000520687 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
SPARC-202ENST00000520687 CEP152O94986 1710 aa13.62□□□□□ -0.23
SPARC-202ENST00000520687 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
SPARC-202ENST00000520687 EFCAB6Q5THR3 1501 aa13.6□□□□□ -0.23
SPARC-202ENST00000520687 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
SPARC-202ENST00000520687 RALBP1Q15311 655 aa13.59□□□□□ -0.23
SPARC-202ENST00000520687 CDCA8Q53HL2 280 aa13.58□□□□□ -0.23
SPARC-202ENST00000520687 MRS2Q9HD23 443 aa13.58□□□□□ -0.23
SPARC-202ENST00000520687 TMF1P82094 1093 aa13.58□□□□□ -0.24
SPARC-202ENST00000520687 A2ML1A8K2U0 1454 aa13.57□□□□□ -0.24
SPARC-202ENST00000520687 SYNMO15061 1565 aa13.57□□□□□ -0.24
SPARC-202ENST00000520687 MYOM2P54296 1465 aa13.56□□□□□ -0.24
SPARC-202ENST00000520687 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
SPARC-202ENST00000520687 CLTCL1P53675 1640 aa13.55□□□□□ -0.24
SPARC-202ENST00000520687 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
SPARC-202ENST00000520687 NEFLP07196 543 aa13.55□□□□□ -0.24
SPARC-202ENST00000520687 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
SPARC-202ENST00000520687 EIF3AQ14152 1382 aaKnown RBP13.55□□□□□ -0.24
SPARC-202ENST00000520687 TESK2Q96S53 571 aa13.54□□□□□ -0.24
SPARC-202ENST00000520687 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
SPARC-202ENST00000520687 KIAA1210Q9ULL0 1709 aa13.54□□□□□ -0.24
SPARC-202ENST00000520687 POLR3GLQ9BT43 218 aa13.54□□□□□ -0.24
SPARC-202ENST00000520687 KIF1BO60333 1816 aa13.53□□□□□ -0.24
SPARC-202ENST00000520687 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
SPARC-202ENST00000520687 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
SPARC-202ENST00000520687 BRD4O60885 1362 aaPredicted RBP13.53□□□□□ -0.24
SPARC-202ENST00000520687 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.24
SPARC-202ENST00000520687 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.25
SPARC-202ENST00000520687 ABCC3O15438 1527 aa13.52□□□□□ -0.25
SPARC-202ENST00000520687 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
SPARC-202ENST00000520687 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
SPARC-202ENST00000520687 ERICH6BQ5W0A0 696 aa13.49□□□□□ -0.25
SPARC-202ENST00000520687 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
SPARC-202ENST00000520687 NRXN1Q9ULB1 1477 aa13.49□□□□□ -0.25
SPARC-202ENST00000520687 TMC1Q8TDI8 760 aa13.49□□□□□ -0.25
SPARC-202ENST00000520687 INSRP06213 1382 aa13.48□□□□□ -0.25
SPARC-202ENST00000520687 IFT172Q9UG01 1749 aa13.48□□□□□ -0.25
SPARC-202ENST00000520687 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
SPARC-202ENST00000520687 MED14O60244 1454 aa13.48□□□□□ -0.25
SPARC-202ENST00000520687 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
SPARC-202ENST00000520687 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
SPARC-202ENST00000520687 PER1O15534 1290 aaPredicted RBP13.47□□□□□ -0.25
SPARC-202ENST00000520687 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
SPARC-202ENST00000520687 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
SPARC-202ENST00000520687 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
SPARC-202ENST00000520687 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
SPARC-202ENST00000520687 ADGRB3O60242 1522 aa13.47□□□□□ -0.25
SPARC-202ENST00000520687 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
SPARC-202ENST00000520687 NOS1P29475 1434 aa13.46□□□□□ -0.25
SPARC-202ENST00000520687 GGT6Q6P531 493 aa13.46□□□□□ -0.25
SPARC-202ENST00000520687 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
SPARC-202ENST00000520687 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
SPARC-202ENST00000520687 SBNO2Q9Y2G9 1366 aa13.45□□□□□ -0.26
SPARC-202ENST00000520687 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
SPARC-202ENST00000520687 ZNF772Q68DY9 489 aaPredicted RBP13.45□□□□□ -0.26
SPARC-202ENST00000520687 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
SPARC-202ENST00000520687 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
SPARC-202ENST00000520687 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
SPARC-202ENST00000520687 NPC1L1Q9UHC9 1359 aa13.43□□□□□ -0.26
SPARC-202ENST00000520687 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
SPARC-202ENST00000520687 FKBP8Q14318 412 aa13.42□□□□□ -0.26
SPARC-202ENST00000520687 THEMISQ8N1K5 641 aaPredicted RBP13.42□□□□□ -0.26
SPARC-202ENST00000520687 PANK3Q9H999 370 aa13.42□□□□□ -0.26
SPARC-202ENST00000520687 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
SPARC-202ENST00000520687 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
SPARC-202ENST00000520687 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
SPARC-202ENST00000520687 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
SPARC-202ENST00000520687 ADGRF5Q8IZF2 1346 aa13.41□□□□□ -0.26
SPARC-202ENST00000520687 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
SPARC-202ENST00000520687 PPLO60437 1756 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms