RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 EIF2AK4Q9P2K8 1649 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-223ENST00000520520 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
CTNNA1-223ENST00000520520 LRRC7Q96NW7 1537 aa12.29□□□□□ -0.44
CTNNA1-223ENST00000520520 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
CTNNA1-223ENST00000520520 MYOM3Q5VTT5 1437 aa12.28□□□□□ -0.44
CTNNA1-223ENST00000520520 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
CTNNA1-223ENST00000520520 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
CTNNA1-223ENST00000520520 LTKP29376 864 aa12.27□□□□□ -0.45
CTNNA1-223ENST00000520520 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.45
CTNNA1-223ENST00000520520 KIF15Q9NS87 1388 aa12.27□□□□□ -0.45
CTNNA1-223ENST00000520520 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-223ENST00000520520 DUOX2Q9NRD8 1548 aa12.27□□□□□ -0.45
CTNNA1-223ENST00000520520 SYNMO15061 1565 aa12.26□□□□□ -0.45
CTNNA1-223ENST00000520520 EID1Q9Y6B2 187 aa12.25□□□□□ -0.45
CTNNA1-223ENST00000520520 CROCC2H7BZ55 1655 aa12.24□□□□□ -0.45
CTNNA1-223ENST00000520520 PIK3C2BO00750 1634 aa12.24□□□□□ -0.45
CTNNA1-223ENST00000520520 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
CTNNA1-223ENST00000520520 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
CTNNA1-223ENST00000520520 CAPN15O75808 1086 aa12.23□□□□□ -0.45
CTNNA1-223ENST00000520520 BCANQ96GW7 911 aa12.23□□□□□ -0.45
CTNNA1-223ENST00000520520 ZNF219Q9P2Y4 722 aaPredicted RBP12.23□□□□□ -0.45
CTNNA1-223ENST00000520520 ABCC5O15440 1437 aa12.22□□□□□ -0.45
CTNNA1-223ENST00000520520 KANK1Q14678 1352 aa12.22□□□□□ -0.45
CTNNA1-223ENST00000520520 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-223ENST00000520520 SLC26A8Q96RN1 970 aa12.21□□□□□ -0.45
CTNNA1-223ENST00000520520 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.46
CTNNA1-223ENST00000520520 DAPK1P53355 1430 aa12.2□□□□□ -0.46
CTNNA1-223ENST00000520520 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
CTNNA1-223ENST00000520520 SLIT1O75093 1534 aa12.2□□□□□ -0.46
CTNNA1-223ENST00000520520 ARHGAP23Q9P227 1491 aa12.2□□□□□ -0.46
CTNNA1-223ENST00000520520 ITGAEP38570 1179 aa12.19□□□□□ -0.46
CTNNA1-223ENST00000520520 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-223ENST00000520520 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
CTNNA1-223ENST00000520520 IDI1Q13907 227 aa12.18□□□□□ -0.46
CTNNA1-223ENST00000520520 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-223ENST00000520520 ARHGAP31Q2M1Z3 1444 aa12.18□□□□□ -0.46
CTNNA1-223ENST00000520520 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
CTNNA1-223ENST00000520520 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
CTNNA1-223ENST00000520520 EFCAB6Q5THR3 1501 aa12.17□□□□□ -0.46
CTNNA1-223ENST00000520520 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-223ENST00000520520 ANKRD30AQ9BXX3 1397 aa12.17□□□□□ -0.46
CTNNA1-223ENST00000520520 RGS17Q9UGC6 210 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-223ENST00000520520 ROBO1Q9Y6N7 1651 aa12.15□□□□□ -0.46
CTNNA1-223ENST00000520520 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-223ENST00000520520 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
CTNNA1-223ENST00000520520 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
CTNNA1-223ENST00000520520 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-223ENST00000520520 KCNA6P17658 529 aa12.13□□□□□ -0.47
CTNNA1-223ENST00000520520 NUTM2DQ5VT03 806 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-223ENST00000520520 TONSLQ96HA7 1378 aa12.12□□□□□ -0.47
CTNNA1-223ENST00000520520 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
CTNNA1-223ENST00000520520 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
CTNNA1-223ENST00000520520 C14orf37Q86TY3 774 aa12.11□□□□□ -0.47
CTNNA1-223ENST00000520520 MYO5BQ9ULV0 1848 aa12.11□□□□□ -0.47
CTNNA1-223ENST00000520520 LMTK2Q8IWU2 1503 aa12.11□□□□□ -0.47
CTNNA1-223ENST00000520520 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
CTNNA1-223ENST00000520520 MSH6P52701 1360 aa12.1□□□□□ -0.47
CTNNA1-223ENST00000520520 DSG3P32926 999 aa12.1□□□□□ -0.47
CTNNA1-223ENST00000520520 SUPT16HQ9Y5B9 1047 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-223ENST00000520520 TET3O43151 1660 aa12.1□□□□□ -0.47
CTNNA1-223ENST00000520520 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-223ENST00000520520 CCER2I3L3R5 266 aa12.09□□□□□ -0.47
CTNNA1-223ENST00000520520 POLA2Q14181 598 aa12.09□□□□□ -0.47
CTNNA1-223ENST00000520520 NOS1P29475 1434 aa12.09□□□□□ -0.47
CTNNA1-223ENST00000520520 PHLPP1O60346 1717 aa12.08□□□□□ -0.47
CTNNA1-223ENST00000520520 SETD1AO15047 1707 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-223ENST00000520520 SLC52A1Q9NWF4 448 aa12.07□□□□□ -0.48
CTNNA1-223ENST00000520520 SLAIN2Q9P270 581 aa12.07□□□□□ -0.48
CTNNA1-223ENST00000520520 ANKRD50Q9ULJ7 1429 aa12.07□□□□□ -0.48
CTNNA1-223ENST00000520520 RIMS2Q9UQ26 1411 aa12.07□□□□□ -0.48
CTNNA1-223ENST00000520520 NKTRP30414 1462 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-223ENST00000520520 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
CTNNA1-223ENST00000520520 NEFLP07196 543 aa12.06□□□□□ -0.48
CTNNA1-223ENST00000520520 ANP32CO43423 234 aa12.05□□□□□ -0.48
CTNNA1-223ENST00000520520 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-223ENST00000520520 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
CTNNA1-223ENST00000520520 ABCB7O75027 752 aa12.04□□□□□ -0.48
CTNNA1-223ENST00000520520 PLEKHG1Q9ULL1 1385 aa12.04□□□□□ -0.48
CTNNA1-223ENST00000520520 ZFYVE9O95405 1425 aa12.03□□□□□ -0.48
CTNNA1-223ENST00000520520 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-223ENST00000520520 HDGFP51858 240 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-223ENST00000520520 TMEM131LA2VDJ0 1609 aa12.03□□□□□ -0.48
CTNNA1-223ENST00000520520 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.48
CTNNA1-223ENST00000520520 JCADQ9P266 1359 aa12.02□□□□□ -0.49
CTNNA1-223ENST00000520520 NAIPQ13075 1403 aa12.02□□□□□ -0.49
CTNNA1-223ENST00000520520 E9PCH4 1651 aa12.01□□□□□ -0.49
CTNNA1-223ENST00000520520 TRIM52Q96A61 297 aa12.01□□□□□ -0.49
CTNNA1-223ENST00000520520 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
CTNNA1-223ENST00000520520 NUTM2EB1AL46 878 aaPredicted RBP12□□□□□ -0.49
CTNNA1-223ENST00000520520 ATF3P18847 181 aa12□□□□□ -0.49
CTNNA1-223ENST00000520520 NUTM2AQ8IVF1 878 aaPredicted RBP12□□□□□ -0.49
CTNNA1-223ENST00000520520 ABCF1Q8NE71 845 aaKnown RBP eCLIP12□□□□□ -0.49
CTNNA1-223ENST00000520520 UNC13BO14795 1591 aa12□□□□□ -0.49
CTNNA1-223ENST00000520520 COL16A1Q07092 1604 aaPredicted RBP12□□□□□ -0.49
CTNNA1-223ENST00000520520 TBX22Q9Y458 520 aa11.99□□□□□ -0.49
CTNNA1-223ENST00000520520 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-223ENST00000520520 LRP6O75581 1613 aa11.98□□□□□ -0.49
CTNNA1-223ENST00000520520 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-223ENST00000520520 ZNF326Q5BKZ1 582 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-223ENST00000520520 SIN3AQ96ST3 1273 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms