RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 CPS1P31327 1500 aa21.12■□□□□ 0.97
VEGFA-221ENST00000520265 UBAP1LF5GYI3 381 aa21.1■□□□□ 0.97
VEGFA-221ENST00000520265 SLC26A8Q96RN1 970 aa21.1■□□□□ 0.97
VEGFA-221ENST00000520265 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
VEGFA-221ENST00000520265 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
VEGFA-221ENST00000520265 SETD5Q9C0A6 1442 aa21.08■□□□□ 0.97
VEGFA-221ENST00000520265 FOXD1Q16676 465 aa21.07■□□□□ 0.96
VEGFA-221ENST00000520265 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
VEGFA-221ENST00000520265 TRPM2O94759 1503 aa21.07■□□□□ 0.96
VEGFA-221ENST00000520265 CLTCL1P53675 1640 aa21.06■□□□□ 0.96
VEGFA-221ENST00000520265 ZFYVE9O95405 1425 aa21.05■□□□□ 0.96
VEGFA-221ENST00000520265 STRCP1A6NGW2 1772 aa21.03■□□□□ 0.96
VEGFA-221ENST00000520265 PLEKHG1Q9ULL1 1385 aa21.03■□□□□ 0.96
VEGFA-221ENST00000520265 PIP4K2BP78356 416 aa21.02■□□□□ 0.96
VEGFA-221ENST00000520265 KIF1BO60333 1816 aa21.01■□□□□ 0.95
VEGFA-221ENST00000520265 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
VEGFA-221ENST00000520265 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
VEGFA-221ENST00000520265 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
VEGFA-221ENST00000520265 TOM1O60784 492 aa20.98■□□□□ 0.95
VEGFA-221ENST00000520265 CCDC144AA2RUR9 1427 aa20.96■□□□□ 0.95
VEGFA-221ENST00000520265 ACIN1Q9UKV3 1341 aaKnown RBP20.96■□□□□ 0.95
VEGFA-221ENST00000520265 KCNA6P17658 529 aa20.95■□□□□ 0.94
VEGFA-221ENST00000520265 PROSER2Q86WR7 435 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-221ENST00000520265 RBM33Q96EV2 1170 aaKnown RBP20.95■□□□□ 0.94
VEGFA-221ENST00000520265 TMEM94Q12767 1356 aa20.91■□□□□ 0.94
VEGFA-221ENST00000520265 DIP2AQ14689 1571 aa20.91■□□□□ 0.94
VEGFA-221ENST00000520265 C14orf37Q86TY3 774 aa20.91■□□□□ 0.94
VEGFA-221ENST00000520265 TBX22Q9Y458 520 aa20.91■□□□□ 0.94
VEGFA-221ENST00000520265 NEXMIFQ5QGS0 1516 aa20.9■□□□□ 0.94
VEGFA-221ENST00000520265 RGL3Q3MIN7 710 aa20.9■□□□□ 0.94
VEGFA-221ENST00000520265 NWD1Q149M9 1564 aa20.89■□□□□ 0.94
VEGFA-221ENST00000520265 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.94
VEGFA-221ENST00000520265 ADAMTS13Q76LX8 1427 aa20.89■□□□□ 0.94
VEGFA-221ENST00000520265 CHD2O14647 1828 aaKnown RBP20.86■□□□□ 0.93
VEGFA-221ENST00000520265 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-221ENST00000520265 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
VEGFA-221ENST00000520265 SETBP1Q9Y6X0 1596 aa20.85■□□□□ 0.93
VEGFA-221ENST00000520265 MSH6P52701 1360 aa20.84■□□□□ 0.93
VEGFA-221ENST00000520265 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
VEGFA-221ENST00000520265 NRXN3Q9Y4C0 1643 aa20.83■□□□□ 0.93
VEGFA-221ENST00000520265 AMOTL2Q9Y2J4 779 aa20.83■□□□□ 0.93
VEGFA-221ENST00000520265 PIK3R4Q99570 1358 aa20.82■□□□□ 0.92
VEGFA-221ENST00000520265 PPLO60437 1756 aa20.82■□□□□ 0.92
VEGFA-221ENST00000520265 HSPA1LP34931 641 aa20.8■□□□□ 0.92
VEGFA-221ENST00000520265 METP08581 1390 aa20.79■□□□□ 0.92
VEGFA-221ENST00000520265 ALKQ9UM73 1620 aa20.78■□□□□ 0.92
VEGFA-221ENST00000520265 PTPRUQ92729 1446 aa20.78■□□□□ 0.92
VEGFA-221ENST00000520265 SPATA31E1Q6ZUB1 1445 aa20.77■□□□□ 0.91
VEGFA-221ENST00000520265 HRCP23327 699 aa20.75■□□□□ 0.91
VEGFA-221ENST00000520265 ADGRF5Q8IZF2 1346 aa20.75■□□□□ 0.91
VEGFA-221ENST00000520265 ANKRD30BQ9BXX2 1392 aa20.74■□□□□ 0.91
VEGFA-221ENST00000520265 ATF3P18847 181 aa20.74■□□□□ 0.91
VEGFA-221ENST00000520265 XRN1Q8IZH2 1706 aaKnown RBP20.73■□□□□ 0.91
VEGFA-221ENST00000520265 IFT172Q9UG01 1749 aa20.72■□□□□ 0.91
VEGFA-221ENST00000520265 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
VEGFA-221ENST00000520265 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
VEGFA-221ENST00000520265 STK26Q9P289 416 aa20.69■□□□□ 0.9
VEGFA-221ENST00000520265 NCOA3Q9Y6Q9 1424 aa20.69■□□□□ 0.9
VEGFA-221ENST00000520265 ROBO1Q9Y6N7 1651 aa20.68■□□□□ 0.9
VEGFA-221ENST00000520265 SETD1AO15047 1707 aaKnown RBP20.68■□□□□ 0.9
VEGFA-221ENST00000520265 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-221ENST00000520265 CADPS2Q86UW7 1296 aa20.68■□□□□ 0.9
VEGFA-221ENST00000520265 SLAIN2Q9P270 581 aa20.68■□□□□ 0.9
VEGFA-221ENST00000520265 KDM2AQ9Y2K7 1162 aa20.68■□□□□ 0.9
VEGFA-221ENST00000520265 PIK3C2GO75747 1445 aa20.64■□□□□ 0.89
VEGFA-221ENST00000520265 FAM135BQ49AJ0 1406 aa20.64■□□□□ 0.89
VEGFA-221ENST00000520265 TMEM132EQ6IEE7 984 aa20.64■□□□□ 0.89
VEGFA-221ENST00000520265 ROBO2Q9HCK4 1378 aa20.63■□□□□ 0.89
VEGFA-221ENST00000520265 DCAF11Q8TEB1 546 aa20.63■□□□□ 0.89
VEGFA-221ENST00000520265 MYOM2P54296 1465 aa20.62■□□□□ 0.89
VEGFA-221ENST00000520265 PTCH1Q13635 1447 aa20.62■□□□□ 0.89
VEGFA-221ENST00000520265 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
VEGFA-221ENST00000520265 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
VEGFA-221ENST00000520265 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-221ENST00000520265 CFAP70Q5T0N1 1121 aa20.6■□□□□ 0.89
VEGFA-221ENST00000520265 DCCP43146 1447 aa20.59■□□□□ 0.89
VEGFA-221ENST00000520265 PHLPP1O60346 1717 aa20.58■□□□□ 0.89
VEGFA-221ENST00000520265 LAMC1P11047 1609 aa20.58■□□□□ 0.89
VEGFA-221ENST00000520265 ASXL1Q8IXJ9 1541 aa20.57■□□□□ 0.88
VEGFA-221ENST00000520265 LRPPRCP42704 1394 aaKnown RBP20.57■□□□□ 0.88
VEGFA-221ENST00000520265 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-221ENST00000520265 MED1Q15648 1581 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-221ENST00000520265 YTHDC2Q9H6S0 1430 aaKnown RBP20.55■□□□□ 0.88
VEGFA-221ENST00000520265 WAPLQ7Z5K2 1190 aa20.55■□□□□ 0.88
VEGFA-221ENST00000520265 C14orf93Q9H972 538 aaKnown RBP20.55■□□□□ 0.88
VEGFA-221ENST00000520265 DHX57Q6P158 1386 aaKnown RBP20.55■□□□□ 0.88
VEGFA-221ENST00000520265 NRXN1Q9ULB1 1477 aa20.55■□□□□ 0.88
VEGFA-221ENST00000520265 MST1RQ04912 1400 aa20.53■□□□□ 0.88
VEGFA-221ENST00000520265 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
VEGFA-221ENST00000520265 NEUROD1Q13562 356 aa20.52■□□□□ 0.88
VEGFA-221ENST00000520265 BRINP3Q76B58 766 aa20.52■□□□□ 0.88
VEGFA-221ENST00000520265 KNDC1Q76NI1 1749 aa20.52■□□□□ 0.88
VEGFA-221ENST00000520265 PRAG1Q86YV5 1406 aa20.51■□□□□ 0.87
VEGFA-221ENST00000520265 ABCC11Q96J66 1382 aa20.5■□□□□ 0.87
VEGFA-221ENST00000520265 PLEKHH1Q9ULM0 1364 aa20.5■□□□□ 0.87
VEGFA-221ENST00000520265 NUTM2FA1L443 756 aa20.5■□□□□ 0.87
VEGFA-221ENST00000520265 POGKQ9P215 609 aa20.5■□□□□ 0.87
VEGFA-221ENST00000520265 TECPR2O15040 1411 aa20.49■□□□□ 0.87
VEGFA-221ENST00000520265 TRAK1Q9UPV9 953 aa20.48■□□□□ 0.87
VEGFA-221ENST00000520265 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms