RNA–Protein interactions for RNA: ENST00000519662.5

HMBOX1-207, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-207ENST00000519662 LTKP29376 864 aa16.3■□□□□ 0.2
HMBOX1-207ENST00000519662 TXNDC2Q86VQ3 553 aa16.3■□□□□ 0.2
HMBOX1-207ENST00000519662 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
HMBOX1-207ENST00000519662 CPS1P31327 1500 aa16.29■□□□□ 0.2
HMBOX1-207ENST00000519662 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
HMBOX1-207ENST00000519662 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
HMBOX1-207ENST00000519662 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
HMBOX1-207ENST00000519662 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.19
HMBOX1-207ENST00000519662 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
HMBOX1-207ENST00000519662 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.26■□□□□ 0.19
HMBOX1-207ENST00000519662 PPLO60437 1756 aa16.25■□□□□ 0.19
HMBOX1-207ENST00000519662 DIP2AQ14689 1571 aa16.25■□□□□ 0.19
HMBOX1-207ENST00000519662 PLEKHG1Q9ULL1 1385 aa16.25■□□□□ 0.19
HMBOX1-207ENST00000519662 ZNF335Q9H4Z2 1342 aaPredicted RBP16.24■□□□□ 0.19
HMBOX1-207ENST00000519662 NEXMIFQ5QGS0 1516 aa16.23■□□□□ 0.19
HMBOX1-207ENST00000519662 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
HMBOX1-207ENST00000519662 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
HMBOX1-207ENST00000519662 NWD1Q149M9 1564 aa16.21■□□□□ 0.19
HMBOX1-207ENST00000519662 SETBP1Q9Y6X0 1596 aa16.21■□□□□ 0.18
HMBOX1-207ENST00000519662 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
HMBOX1-207ENST00000519662 NRXN3Q9Y4C0 1643 aa16.2■□□□□ 0.18
HMBOX1-207ENST00000519662 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
HMBOX1-207ENST00000519662 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
HMBOX1-207ENST00000519662 PIK3R4Q99570 1358 aa16.17■□□□□ 0.18
HMBOX1-207ENST00000519662 SPATA31E1Q6ZUB1 1445 aa16.17■□□□□ 0.18
HMBOX1-207ENST00000519662 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
HMBOX1-207ENST00000519662 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
HMBOX1-207ENST00000519662 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
HMBOX1-207ENST00000519662 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
HMBOX1-207ENST00000519662 SETD1AO15047 1707 aaKnown RBP16.16■□□□□ 0.18
HMBOX1-207ENST00000519662 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
HMBOX1-207ENST00000519662 FOXD1Q16676 465 aa16.15■□□□□ 0.18
HMBOX1-207ENST00000519662 ANKRD30BQ9BXX2 1392 aa16.14■□□□□ 0.17
HMBOX1-207ENST00000519662 KCNA6P17658 529 aa16.14■□□□□ 0.17
HMBOX1-207ENST00000519662 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
HMBOX1-207ENST00000519662 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
HMBOX1-207ENST00000519662 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
HMBOX1-207ENST00000519662 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
HMBOX1-207ENST00000519662 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
HMBOX1-207ENST00000519662 BCANQ96GW7 911 aa16.08■□□□□ 0.16
HMBOX1-207ENST00000519662 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
HMBOX1-207ENST00000519662 ALKQ9UM73 1620 aa16.08■□□□□ 0.16
HMBOX1-207ENST00000519662 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
HMBOX1-207ENST00000519662 LAMC1P11047 1609 aa16.07■□□□□ 0.16
HMBOX1-207ENST00000519662 MYOM2P54296 1465 aa16.06■□□□□ 0.16
HMBOX1-207ENST00000519662 PRAG1Q86YV5 1406 aa16.06■□□□□ 0.16
HMBOX1-207ENST00000519662 NRXN1Q9ULB1 1477 aa16.05■□□□□ 0.16
HMBOX1-207ENST00000519662 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
HMBOX1-207ENST00000519662 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
HMBOX1-207ENST00000519662 TOM1O60784 492 aa16.03■□□□□ 0.16
HMBOX1-207ENST00000519662 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
HMBOX1-207ENST00000519662 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.16
HMBOX1-207ENST00000519662 TMEM94Q12767 1356 aa16.02■□□□□ 0.16
HMBOX1-207ENST00000519662 METP08581 1390 aa16.01■□□□□ 0.15
HMBOX1-207ENST00000519662 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
HMBOX1-207ENST00000519662 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
HMBOX1-207ENST00000519662 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
HMBOX1-207ENST00000519662 RGL3Q3MIN7 710 aa16■□□□□ 0.15
HMBOX1-207ENST00000519662 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
HMBOX1-207ENST00000519662 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
HMBOX1-207ENST00000519662 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
HMBOX1-207ENST00000519662 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
HMBOX1-207ENST00000519662 TECPR2O15040 1411 aa15.96■□□□□ 0.15
HMBOX1-207ENST00000519662 DCCP43146 1447 aa15.96■□□□□ 0.15
HMBOX1-207ENST00000519662 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
HMBOX1-207ENST00000519662 MSH6P52701 1360 aa15.96■□□□□ 0.15
HMBOX1-207ENST00000519662 NALCNQ8IZF0 1738 aa15.96■□□□□ 0.15
HMBOX1-207ENST00000519662 ASXL1Q8IXJ9 1541 aa15.95■□□□□ 0.14
HMBOX1-207ENST00000519662 C14orf93Q9H972 538 aaKnown RBP15.94■□□□□ 0.14
HMBOX1-207ENST00000519662 DHX57Q6P158 1386 aaKnown RBP15.94■□□□□ 0.14
HMBOX1-207ENST00000519662 FAM135BQ49AJ0 1406 aa15.93■□□□□ 0.14
HMBOX1-207ENST00000519662 LRPPRCP42704 1394 aaKnown RBP15.92■□□□□ 0.14
HMBOX1-207ENST00000519662 ABCC11Q96J66 1382 aa15.92■□□□□ 0.14
HMBOX1-207ENST00000519662 C19orf44Q9H6X5 657 aa15.92■□□□□ 0.14
HMBOX1-207ENST00000519662 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
HMBOX1-207ENST00000519662 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
HMBOX1-207ENST00000519662 SIRT1Q96EB6 747 aa15.9■□□□□ 0.14
HMBOX1-207ENST00000519662 YTHDC2Q9H6S0 1430 aaKnown RBP15.9■□□□□ 0.14
HMBOX1-207ENST00000519662 ADGRB1O14514 1584 aa15.9■□□□□ 0.14
HMBOX1-207ENST00000519662 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
HMBOX1-207ENST00000519662 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
HMBOX1-207ENST00000519662 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
HMBOX1-207ENST00000519662 ROBO2Q9HCK4 1378 aa15.88■□□□□ 0.13
HMBOX1-207ENST00000519662 RBM33Q96EV2 1170 aaKnown RBP15.87■□□□□ 0.13
HMBOX1-207ENST00000519662 CDC42BPGQ6DT37 1551 aa15.87■□□□□ 0.13
HMBOX1-207ENST00000519662 PIP4K2BP78356 416 aa15.86■□□□□ 0.13
HMBOX1-207ENST00000519662 SLAIN2Q9P270 581 aa15.86■□□□□ 0.13
HMBOX1-207ENST00000519662 ATF3P18847 181 aa15.85■□□□□ 0.13
HMBOX1-207ENST00000519662 CFAP70Q5T0N1 1121 aa15.85■□□□□ 0.13
HMBOX1-207ENST00000519662 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
HMBOX1-207ENST00000519662 ARHGEF28Q8N1W1 1705 aaKnown RBP15.85■□□□□ 0.13
HMBOX1-207ENST00000519662 MST1RQ04912 1400 aa15.84■□□□□ 0.13
HMBOX1-207ENST00000519662 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.13
HMBOX1-207ENST00000519662 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.13
HMBOX1-207ENST00000519662 PHLPP1O60346 1717 aa15.83■□□□□ 0.13
HMBOX1-207ENST00000519662 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
HMBOX1-207ENST00000519662 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
HMBOX1-207ENST00000519662 HSPA1LP34931 641 aa15.82■□□□□ 0.12
HMBOX1-207ENST00000519662 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
HMBOX1-207ENST00000519662 KDM2AQ9Y2K7 1162 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms