RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 ILDR1Q86SU0 546 aaPredicted RBP7.8□□□□□ -1.16
AP3B1-204ENST00000519295 DHX29Q7Z478 1369 aaKnown RBP7.8□□□□□ -1.16
AP3B1-204ENST00000519295 SPHKAPQ2M3C7 1700 aa7.8□□□□□ -1.16
AP3B1-204ENST00000519295 KDM2AQ9Y2K7 1162 aa7.79□□□□□ -1.16
AP3B1-204ENST00000519295 LRRC9Q6ZRR7 1453 aa7.79□□□□□ -1.16
AP3B1-204ENST00000519295 PAXIP1Q6ZW49 1069 aaPredicted RBP7.79□□□□□ -1.16
AP3B1-204ENST00000519295 PRDM4Q9UKN5 801 aa7.78□□□□□ -1.16
AP3B1-204ENST00000519295 NOS1P29475 1434 aa7.78□□□□□ -1.16
AP3B1-204ENST00000519295 MYO5BQ9ULV0 1848 aa7.78□□□□□ -1.16
AP3B1-204ENST00000519295 E9PCH4 1651 aa7.78□□□□□ -1.16
AP3B1-204ENST00000519295 MSH5O43196 834 aa7.77□□□□□ -1.17
AP3B1-204ENST00000519295 COL16A1Q07092 1604 aaPredicted RBP7.77□□□□□ -1.17
AP3B1-204ENST00000519295 HAP1P54257 671 aaPredicted RBP7.77□□□□□ -1.17
AP3B1-204ENST00000519295 CRYBG1Q9Y4K1 1723 aa7.76□□□□□ -1.17
AP3B1-204ENST00000519295 TMED8Q6PL24 325 aaPredicted RBP7.76□□□□□ -1.17
AP3B1-204ENST00000519295 BCCIPQ9P287 314 aaKnown RBP eCLIP7.76□□□□□ -1.17
AP3B1-204ENST00000519295 GTF2E1P29083 439 aaPredicted RBP7.75□□□□□ -1.17
AP3B1-204ENST00000519295 CHIC1Q5VXU3 224 aa7.75□□□□□ -1.17
AP3B1-204ENST00000519295 EFCAB2Q5VUJ9 269 aa7.74□□□□□ -1.17
AP3B1-204ENST00000519295 LRRC7Q96NW7 1537 aa7.74□□□□□ -1.17
AP3B1-204ENST00000519295 ZFYVE9O95405 1425 aa7.73□□□□□ -1.17
AP3B1-204ENST00000519295 BRPF3Q9ULD4 1205 aa7.73□□□□□ -1.17
AP3B1-204ENST00000519295 PPLO60437 1756 aa7.73□□□□□ -1.17
AP3B1-204ENST00000519295 PLEKHD1A6NEE1 506 aa7.73□□□□□ -1.17
AP3B1-204ENST00000519295 PUS7Q96PZ0 661 aaKnown RBP7.73□□□□□ -1.17
AP3B1-204ENST00000519295 DMRT2Q9Y5R5 561 aa7.73□□□□□ -1.17
AP3B1-204ENST00000519295 VPS8Q8N3P4 1428 aa7.73□□□□□ -1.17
AP3B1-204ENST00000519295 SUPT5HO00267 1087 aaKnown RBP7.72□□□□□ -1.17
AP3B1-204ENST00000519295 PKD2Q13563 968 aa7.72□□□□□ -1.17
AP3B1-204ENST00000519295 CDK12Q9NYV4 1490 aaPredicted RBP7.72□□□□□ -1.17
AP3B1-204ENST00000519295 FGD6Q6ZV73 1430 aa7.71□□□□□ -1.17
AP3B1-204ENST00000519295 ABCA3Q99758 1704 aa7.71□□□□□ -1.17
AP3B1-204ENST00000519295 USP54Q70EL1 1684 aa7.71□□□□□ -1.18
AP3B1-204ENST00000519295 NALCNQ8IZF0 1738 aa7.71□□□□□ -1.18
AP3B1-204ENST00000519295 ZMYM3Q14202 1370 aa7.71□□□□□ -1.18
AP3B1-204ENST00000519295 ZNF692Q9BU19 519 aaPredicted RBP7.7□□□□□ -1.18
AP3B1-204ENST00000519295 MYOM3Q5VTT5 1437 aa7.7□□□□□ -1.18
AP3B1-204ENST00000519295 DCCP43146 1447 aa7.69□□□□□ -1.18
AP3B1-204ENST00000519295 RGPD3A6NKT7 1758 aaPredicted RBP7.69□□□□□ -1.18
AP3B1-204ENST00000519295 RGPD4Q7Z3J3 1758 aa7.69□□□□□ -1.18
AP3B1-204ENST00000519295 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
AP3B1-204ENST00000519295 RAPGEF3O95398 923 aa7.68□□□□□ -1.18
AP3B1-204ENST00000519295 ROBO1Q9Y6N7 1651 aa7.68□□□□□ -1.18
AP3B1-204ENST00000519295 ROCK1Q13464 1354 aa7.68□□□□□ -1.18
AP3B1-204ENST00000519295 COL24A1Q17RW2 1714 aa7.67□□□□□ -1.18
AP3B1-204ENST00000519295 ADGRB2O60241 1585 aa7.67□□□□□ -1.18
AP3B1-204ENST00000519295 TEX2Q8IWB9 1127 aa7.67□□□□□ -1.18
AP3B1-204ENST00000519295 TRPM2O94759 1503 aa7.67□□□□□ -1.18
AP3B1-204ENST00000519295 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
AP3B1-204ENST00000519295 CDK11AQ9UQ88 783 aaPredicted RBP7.67□□□□□ -1.18
AP3B1-204ENST00000519295 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.67□□□□□ -1.18
AP3B1-204ENST00000519295 IRX6P78412 446 aaPredicted RBP7.67□□□□□ -1.18
AP3B1-204ENST00000519295 PIK3R4Q99570 1358 aa7.65□□□□□ -1.18
AP3B1-204ENST00000519295 FAM135BQ49AJ0 1406 aa7.65□□□□□ -1.18
AP3B1-204ENST00000519295 SECISBP2LQ93073 1101 aaKnown RBP7.65□□□□□ -1.18
AP3B1-204ENST00000519295 SCAF11Q99590 1463 aaKnown RBP7.65□□□□□ -1.18
AP3B1-204ENST00000519295 GRIPAP1Q4V328 841 aa7.64□□□□□ -1.19
AP3B1-204ENST00000519295 PHLPP1O60346 1717 aa7.64□□□□□ -1.19
AP3B1-204ENST00000519295 ABCC5O15440 1437 aa7.64□□□□□ -1.19
AP3B1-204ENST00000519295 DAPK1P53355 1430 aa7.64□□□□□ -1.19
AP3B1-204ENST00000519295 NEXMIFQ5QGS0 1516 aa7.64□□□□□ -1.19
AP3B1-204ENST00000519295 HSP90B1P14625 803 aaKnown RBP7.64□□□□□ -1.19
AP3B1-204ENST00000519295 KIF1BO60333 1816 aa7.64□□□□□ -1.19
AP3B1-204ENST00000519295 LRP5O75197 1615 aa7.64□□□□□ -1.19
AP3B1-204ENST00000519295 NPHP4O75161 1426 aaPredicted RBP7.63□□□□□ -1.19
AP3B1-204ENST00000519295 NWD2Q9ULI1 1742 aa7.63□□□□□ -1.19
AP3B1-204ENST00000519295 KIF1AQ12756 1690 aa7.63□□□□□ -1.19
AP3B1-204ENST00000519295 KIAA1210Q9ULL0 1709 aa7.63□□□□□ -1.19
AP3B1-204ENST00000519295 MST1RQ04912 1400 aa7.63□□□□□ -1.19
AP3B1-204ENST00000519295 A0A0U1RQG5 324 aaPredicted RBP7.63□□□□□ -1.19
AP3B1-204ENST00000519295 NECTIN2Q92692 538 aa7.62□□□□□ -1.19
AP3B1-204ENST00000519295 WNK3Q9BYP7 1800 aa7.62□□□□□ -1.19
AP3B1-204ENST00000519295 NRXN1Q9ULB1 1477 aa7.62□□□□□ -1.19
AP3B1-204ENST00000519295 CDC42BPGQ6DT37 1551 aa7.61□□□□□ -1.19
AP3B1-204ENST00000519295 IPO4Q8TEX9 1081 aaKnown RBP7.61□□□□□ -1.19
AP3B1-204ENST00000519295 NRAPQ86VF7 1730 aa7.61□□□□□ -1.19
AP3B1-204ENST00000519295 FMN2Q9NZ56 1722 aa7.61□□□□□ -1.19
AP3B1-204ENST00000519295 TNRQ92752 1358 aa7.61□□□□□ -1.19
AP3B1-204ENST00000519295 TOPAZ1Q8N9V7 1692 aa7.61□□□□□ -1.19
AP3B1-204ENST00000519295 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
AP3B1-204ENST00000519295 NAP1L2Q9ULW6 460 aaPredicted RBP7.61□□□□□ -1.19
AP3B1-204ENST00000519295 DEKP35659 375 aaKnown RBP7.6□□□□□ -1.19
AP3B1-204ENST00000519295 MMP14P50281 582 aa7.6□□□□□ -1.19
AP3B1-204ENST00000519295 TRPM3Q9HCF6 1732 aaPredicted RBP7.59□□□□□ -1.19
AP3B1-204ENST00000519295 CLTCL1P53675 1640 aa7.59□□□□□ -1.19
AP3B1-204ENST00000519295 CCNB3Q8WWL7 1395 aa7.58□□□□□ -1.2
AP3B1-204ENST00000519295 TICAM2Q86XR7 235 aa7.58□□□□□ -1.2
AP3B1-204ENST00000519295 PRDM16Q9HAZ2 1276 aa7.57□□□□□ -1.2
AP3B1-204ENST00000519295 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
AP3B1-204ENST00000519295 PLEKHG1Q9ULL1 1385 aa7.57□□□□□ -1.2
AP3B1-204ENST00000519295 TECPR2O15040 1411 aa7.57□□□□□ -1.2
AP3B1-204ENST00000519295 PTCH1Q13635 1447 aa7.57□□□□□ -1.2
AP3B1-204ENST00000519295 MTUS2Q5JR59 1369 aa7.56□□□□□ -1.2
AP3B1-204ENST00000519295 ALS2Q96Q42 1657 aa7.56□□□□□ -1.2
AP3B1-204ENST00000519295 QSER1Q2KHR3 1735 aa7.55□□□□□ -1.2
AP3B1-204ENST00000519295 PLCH1Q4KWH8 1693 aa7.55□□□□□ -1.2
AP3B1-204ENST00000519295 FAM43BQ6ZT52 329 aaPredicted RBP7.55□□□□□ -1.2
AP3B1-204ENST00000519295 RREB1Q92766 1687 aa7.55□□□□□ -1.2
AP3B1-204ENST00000519295 DLC1Q96QB1 1528 aa7.55□□□□□ -1.2
AP3B1-204ENST00000519295 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms