RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 RIMS2Q9UQ26 1411 aa24.9■■□□□ 1.58
TSNARE1-202ENST00000518720 TMEM2Q9UHN6 1383 aa24.9■■□□□ 1.58
TSNARE1-202ENST00000518720 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.58
TSNARE1-202ENST00000518720 ZFYVE9O95405 1425 aa24.87■■□□□ 1.57
TSNARE1-202ENST00000518720 STRCQ7RTU9 1775 aa24.85■■□□□ 1.57
TSNARE1-202ENST00000518720 SCAF11Q99590 1463 aaKnown RBP24.85■■□□□ 1.57
TSNARE1-202ENST00000518720 NUTM2DQ5VT03 806 aaPredicted RBP24.84■■□□□ 1.57
TSNARE1-202ENST00000518720 PPP1R15AO75807 674 aaPredicted RBP24.83■■□□□ 1.57
TSNARE1-202ENST00000518720 EID1Q9Y6B2 187 aa24.82■■□□□ 1.56
TSNARE1-202ENST00000518720 TONSLQ96HA7 1378 aa24.81■■□□□ 1.56
TSNARE1-202ENST00000518720 TXNDC2Q86VQ3 553 aa24.81■■□□□ 1.56
TSNARE1-202ENST00000518720 IQGAP1P46940 1657 aa24.81■■□□□ 1.56
TSNARE1-202ENST00000518720 NCKAP5LQ9HCH0 1330 aa24.81■■□□□ 1.56
TSNARE1-202ENST00000518720 ANKLE2Q86XL3 938 aa24.8■■□□□ 1.56
TSNARE1-202ENST00000518720 RPGRIP1LQ68CZ1 1315 aa24.8■■□□□ 1.56
TSNARE1-202ENST00000518720 LTKP29376 864 aa24.79■■□□□ 1.56
TSNARE1-202ENST00000518720 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.79■■□□□ 1.56
TSNARE1-202ENST00000518720 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
TSNARE1-202ENST00000518720 MYOM2P54296 1465 aa24.77■■□□□ 1.56
TSNARE1-202ENST00000518720 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
TSNARE1-202ENST00000518720 DCAF11Q8TEB1 546 aa24.76■■□□□ 1.55
TSNARE1-202ENST00000518720 KDM2AQ9Y2K7 1162 aa24.75■■□□□ 1.55
TSNARE1-202ENST00000518720 NPHP4O75161 1426 aaPredicted RBP24.75■■□□□ 1.55
TSNARE1-202ENST00000518720 L3MBTL2Q969R5 705 aa24.74■■□□□ 1.55
TSNARE1-202ENST00000518720 NRXN3Q9Y4C0 1643 aa24.73■■□□□ 1.55
TSNARE1-202ENST00000518720 PLEKHG1Q9ULL1 1385 aa24.73■■□□□ 1.55
TSNARE1-202ENST00000518720 BCANQ96GW7 911 aa24.73■■□□□ 1.55
TSNARE1-202ENST00000518720 MED14O60244 1454 aa24.72■■□□□ 1.55
TSNARE1-202ENST00000518720 VGFO15240 615 aaPredicted RBP24.72■■□□□ 1.55
TSNARE1-202ENST00000518720 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
TSNARE1-202ENST00000518720 ADGRF5Q8IZF2 1346 aa24.71■■□□□ 1.55
TSNARE1-202ENST00000518720 NRXN1Q9ULB1 1477 aa24.68■■□□□ 1.54
TSNARE1-202ENST00000518720 PIK3C2GO75747 1445 aa24.68■■□□□ 1.54
TSNARE1-202ENST00000518720 SETD1AO15047 1707 aaKnown RBP24.67■■□□□ 1.54
TSNARE1-202ENST00000518720 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
TSNARE1-202ENST00000518720 LAMC1P11047 1609 aa24.66■■□□□ 1.54
TSNARE1-202ENST00000518720 ALKQ9UM73 1620 aa24.64■■□□□ 1.54
TSNARE1-202ENST00000518720 PRAG1Q86YV5 1406 aa24.64■■□□□ 1.54
TSNARE1-202ENST00000518720 ADAMTS13Q76LX8 1427 aa24.63■■□□□ 1.53
TSNARE1-202ENST00000518720 SLC26A8Q96RN1 970 aa24.63■■□□□ 1.53
TSNARE1-202ENST00000518720 STAC3Q96MF2 364 aa24.62■■□□□ 1.53
TSNARE1-202ENST00000518720 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
TSNARE1-202ENST00000518720 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
TSNARE1-202ENST00000518720 TRPM1Q7Z4N2 1603 aa24.6■■□□□ 1.53
TSNARE1-202ENST00000518720 TIMELESSQ9UNS1 1208 aa24.59■■□□□ 1.53
TSNARE1-202ENST00000518720 ASXL1Q8IXJ9 1541 aa24.57■■□□□ 1.52
TSNARE1-202ENST00000518720 CFAP70Q5T0N1 1121 aa24.55■■□□□ 1.52
TSNARE1-202ENST00000518720 CHD2O14647 1828 aaKnown RBP24.54■■□□□ 1.52
TSNARE1-202ENST00000518720 NBPF8Q3BBV2 869 aa24.53■■□□□ 1.52
TSNARE1-202ENST00000518720 TBX22Q9Y458 520 aa24.53■■□□□ 1.52
TSNARE1-202ENST00000518720 METP08581 1390 aa24.53■■□□□ 1.52
TSNARE1-202ENST00000518720 STRCP1A6NGW2 1772 aa24.52■■□□□ 1.52
TSNARE1-202ENST00000518720 FBXO41Q8TF61 875 aa24.51■■□□□ 1.51
TSNARE1-202ENST00000518720 C14orf93Q9H972 538 aaKnown RBP24.51■■□□□ 1.51
TSNARE1-202ENST00000518720 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
TSNARE1-202ENST00000518720 NWD1Q149M9 1564 aa24.5■■□□□ 1.51
TSNARE1-202ENST00000518720 XRN1Q8IZH2 1706 aaKnown RBP24.5■■□□□ 1.51
TSNARE1-202ENST00000518720 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
TSNARE1-202ENST00000518720 TMEM132EQ6IEE7 984 aa24.48■■□□□ 1.51
TSNARE1-202ENST00000518720 KNDC1Q76NI1 1749 aa24.48■■□□□ 1.51
TSNARE1-202ENST00000518720 PTPRUQ92729 1446 aa24.48■■□□□ 1.51
TSNARE1-202ENST00000518720 ROCK2O75116 1388 aaKnown RBP24.47■■□□□ 1.51
TSNARE1-202ENST00000518720 PIK3R4Q99570 1358 aa24.47■■□□□ 1.51
TSNARE1-202ENST00000518720 ZNF335Q9H4Z2 1342 aaPredicted RBP24.47■■□□□ 1.51
TSNARE1-202ENST00000518720 NBPF1Q3BBV0 1214 aa24.45■■□□□ 1.5
TSNARE1-202ENST00000518720 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
TSNARE1-202ENST00000518720 STK26Q9P289 416 aa24.43■■□□□ 1.5
TSNARE1-202ENST00000518720 ARHGEF28Q8N1W1 1705 aaKnown RBP24.43■■□□□ 1.5
TSNARE1-202ENST00000518720 LRPPRCP42704 1394 aaKnown RBP24.42■■□□□ 1.5
TSNARE1-202ENST00000518720 CPS1P31327 1500 aa24.41■■□□□ 1.5
TSNARE1-202ENST00000518720 NKTRP30414 1462 aaKnown RBP24.41■■□□□ 1.5
TSNARE1-202ENST00000518720 KCNA6P17658 529 aa24.41■■□□□ 1.5
TSNARE1-202ENST00000518720 AMOTL2Q9Y2J4 779 aa24.41■■□□□ 1.5
TSNARE1-202ENST00000518720 LTBP4Q8N2S1 1624 aa24.37■■□□□ 1.49
TSNARE1-202ENST00000518720 TRAK1Q9UPV9 953 aa24.37■■□□□ 1.49
TSNARE1-202ENST00000518720 GPRASP1Q5JY77 1395 aa24.37■■□□□ 1.49
TSNARE1-202ENST00000518720 TECPR2O15040 1411 aa24.36■■□□□ 1.49
TSNARE1-202ENST00000518720 PTCH1Q13635 1447 aa24.36■■□□□ 1.49
TSNARE1-202ENST00000518720 CARD11Q9BXL7 1154 aa24.36■■□□□ 1.49
TSNARE1-202ENST00000518720 DLC1Q96QB1 1528 aa24.35■■□□□ 1.49
TSNARE1-202ENST00000518720 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
TSNARE1-202ENST00000518720 XIRP1Q702N8 1843 aaKnown RBP24.35■■□□□ 1.49
TSNARE1-202ENST00000518720 ABCC11Q96J66 1382 aa24.34■■□□□ 1.49
TSNARE1-202ENST00000518720 ROBO2Q9HCK4 1378 aa24.34■■□□□ 1.49
TSNARE1-202ENST00000518720 QRICH2Q9H0J4 1663 aa24.32■■□□□ 1.48
TSNARE1-202ENST00000518720 LRRC7Q96NW7 1537 aa24.31■■□□□ 1.48
TSNARE1-202ENST00000518720 PROSER2Q86WR7 435 aaPredicted RBP24.31■■□□□ 1.48
TSNARE1-202ENST00000518720 NALCNQ8IZF0 1738 aa24.31■■□□□ 1.48
TSNARE1-202ENST00000518720 RBM33Q96EV2 1170 aaKnown RBP24.3■■□□□ 1.48
TSNARE1-202ENST00000518720 PLEKHH1Q9ULM0 1364 aa24.29■■□□□ 1.48
TSNARE1-202ENST00000518720 EIF3AQ14152 1382 aaKnown RBP24.29■■□□□ 1.48
TSNARE1-202ENST00000518720 FAM135BQ49AJ0 1406 aa24.28■■□□□ 1.48
TSNARE1-202ENST00000518720 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
TSNARE1-202ENST00000518720 SAFB2Q14151 953 aaKnown RBP eCLIP24.27■■□□□ 1.48
TSNARE1-202ENST00000518720 PRAM1Q96QH2 718 aa24.27■■□□□ 1.48
TSNARE1-202ENST00000518720 POGKQ9P215 609 aa24.27■■□□□ 1.48
TSNARE1-202ENST00000518720 WAPLQ7Z5K2 1190 aa24.26■■□□□ 1.47
TSNARE1-202ENST00000518720 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.26■■□□□ 1.47
TSNARE1-202ENST00000518720 USP47Q96K76 1375 aa24.26■■□□□ 1.47
TSNARE1-202ENST00000518720 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms