RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SLC4A1APQ9BWU0 796 aaKnown RBP36.89■■■■□ 3.5
PVT1-204ENST00000517525 TRPM2O94759 1503 aa36.89■■■■□ 3.5
PVT1-204ENST00000517525 STRCP1A6NGW2 1772 aa36.87■■■■□ 3.49
PVT1-204ENST00000517525 LRRC7Q96NW7 1537 aa36.87■■■■□ 3.49
PVT1-204ENST00000517525 UBAP1LF5GYI3 381 aa36.86■■■■□ 3.49
PVT1-204ENST00000517525 KCNA6P17658 529 aa36.84■■■■□ 3.49
PVT1-204ENST00000517525 SLC26A8Q96RN1 970 aa36.84■■■■□ 3.49
PVT1-204ENST00000517525 PPP1R15AO75807 674 aaPredicted RBP36.83■■■■□ 3.49
PVT1-204ENST00000517525 SETD5Q9C0A6 1442 aa36.82■■■■□ 3.48
PVT1-204ENST00000517525 TBX22Q9Y458 520 aa36.81■■■■□ 3.48
PVT1-204ENST00000517525 TOM1O60784 492 aa36.78■■■■□ 3.48
PVT1-204ENST00000517525 CLTCL1P53675 1640 aa36.77■■■■□ 3.48
PVT1-204ENST00000517525 BCANQ96GW7 911 aa36.75■■■■□ 3.47
PVT1-204ENST00000517525 MPHOSPH9Q99550 1183 aa36.74■■■■□ 3.47
PVT1-204ENST00000517525 ADAMTS13Q76LX8 1427 aa36.73■■■■□ 3.47
PVT1-204ENST00000517525 NWD1Q149M9 1564 aa36.72■■■■□ 3.47
PVT1-204ENST00000517525 NKTRP30414 1462 aaKnown RBP36.7■■■■□ 3.47
PVT1-204ENST00000517525 PIK3R4Q99570 1358 aa36.7■■■■□ 3.47
PVT1-204ENST00000517525 DIP2AQ14689 1571 aa36.7■■■■□ 3.46
PVT1-204ENST00000517525 NUTM2DQ5VT03 806 aaPredicted RBP36.68■■■■□ 3.46
PVT1-204ENST00000517525 ZNF326Q5BKZ1 582 aaKnown RBP36.67■■■■□ 3.46
PVT1-204ENST00000517525 ALKQ9UM73 1620 aa36.66■■■■□ 3.46
PVT1-204ENST00000517525 RAB3GAP2Q9H2M9 1393 aa36.65■■■■□ 3.46
PVT1-204ENST00000517525 HRCP23327 699 aa36.64■■■■□ 3.46
PVT1-204ENST00000517525 TMEM94Q12767 1356 aa36.64■■■■□ 3.46
PVT1-204ENST00000517525 RPGRIP1LQ68CZ1 1315 aa36.63■■■■□ 3.45
PVT1-204ENST00000517525 KIF1BO60333 1816 aa36.63■■■■□ 3.45
PVT1-204ENST00000517525 NEXMIFQ5QGS0 1516 aa36.63■■■■□ 3.45
PVT1-204ENST00000517525 SETBP1Q9Y6X0 1596 aa36.62■■■■□ 3.45
PVT1-204ENST00000517525 PROSER2Q86WR7 435 aaPredicted RBP36.62■■■■□ 3.45
PVT1-204ENST00000517525 FOXD1Q16676 465 aa36.61■■■■□ 3.45
PVT1-204ENST00000517525 CHD2O14647 1828 aaKnown RBP36.61■■■■□ 3.45
PVT1-204ENST00000517525 XIRP1Q702N8 1843 aaKnown RBP36.58■■■■□ 3.45
PVT1-204ENST00000517525 SENP3Q9H4L4 574 aaPredicted RBP36.56■■■■□ 3.44
PVT1-204ENST00000517525 CCDC144AA2RUR9 1427 aa36.56■■■■□ 3.44
PVT1-204ENST00000517525 NCOA3Q9Y6Q9 1424 aa36.56■■■■□ 3.44
PVT1-204ENST00000517525 VGFO15240 615 aaPredicted RBP36.55■■■■□ 3.44
PVT1-204ENST00000517525 NRXN3Q9Y4C0 1643 aa36.55■■■■□ 3.44
PVT1-204ENST00000517525 PIP4K2BP78356 416 aa36.54■■■■□ 3.44
PVT1-204ENST00000517525 SPATA31E1Q6ZUB1 1445 aa36.5■■■■□ 3.43
PVT1-204ENST00000517525 DISP3Q9P2K9 1392 aa36.49■■■■□ 3.43
PVT1-204ENST00000517525 SCAF1Q9H7N4 1312 aaKnown RBP36.48■■■■□ 3.43
PVT1-204ENST00000517525 PTPRUQ92729 1446 aa36.48■■■■□ 3.43
PVT1-204ENST00000517525 AMOTL2Q9Y2J4 779 aa36.47■■■■□ 3.43
PVT1-204ENST00000517525 HSPA1LP34931 641 aa36.44■■■■□ 3.42
PVT1-204ENST00000517525 METP08581 1390 aa36.43■■■■□ 3.42
PVT1-204ENST00000517525 MSH6P52701 1360 aa36.42■■■■□ 3.42
PVT1-204ENST00000517525 RBM33Q96EV2 1170 aaKnown RBP36.42■■■■□ 3.42
PVT1-204ENST00000517525 FAM135BQ49AJ0 1406 aa36.42■■■■□ 3.42
PVT1-204ENST00000517525 ANKRD30BQ9BXX2 1392 aa36.39■■■■□ 3.42
PVT1-204ENST00000517525 PPLO60437 1756 aa36.38■■■■□ 3.41
PVT1-204ENST00000517525 ILDR2Q71H61 639 aa36.38■■■■□ 3.41
PVT1-204ENST00000517525 XRN1Q8IZH2 1706 aaKnown RBP36.38■■■■□ 3.41
PVT1-204ENST00000517525 C19orf44Q9H6X5 657 aa36.34■■■■□ 3.41
PVT1-204ENST00000517525 RGL3Q3MIN7 710 aa36.32■■■■□ 3.4
PVT1-204ENST00000517525 PRAG1Q86YV5 1406 aa36.32■■■■□ 3.4
PVT1-204ENST00000517525 SLAIN2Q9P270 581 aa36.29■■■■□ 3.4
PVT1-204ENST00000517525 ADGRF5Q8IZF2 1346 aa36.29■■■■□ 3.4
PVT1-204ENST00000517525 SETD1AO15047 1707 aaKnown RBP36.28■■■■□ 3.4
PVT1-204ENST00000517525 CADPS2Q86UW7 1296 aa36.27■■■■□ 3.4
PVT1-204ENST00000517525 IFT172Q9UG01 1749 aa36.25■■■■□ 3.39
PVT1-204ENST00000517525 DCCP43146 1447 aa36.25■■■■□ 3.39
PVT1-204ENST00000517525 C14orf37Q86TY3 774 aa36.24■■■■□ 3.39
PVT1-204ENST00000517525 PTCH1Q13635 1447 aa36.24■■■■□ 3.39
PVT1-204ENST00000517525 PIK3C2GO75747 1445 aa36.2■■■■□ 3.39
PVT1-204ENST00000517525 ATF3P18847 181 aa36.2■■■■□ 3.39
PVT1-204ENST00000517525 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.2■■■■□ 3.38
PVT1-204ENST00000517525 NRXN1Q9ULB1 1477 aa36.18■■■■□ 3.38
PVT1-204ENST00000517525 SOCS7O14512 581 aa36.17■■■■□ 3.38
PVT1-204ENST00000517525 MYOM2P54296 1465 aa36.17■■■■□ 3.38
PVT1-204ENST00000517525 ROBO1Q9Y6N7 1651 aa36.16■■■■□ 3.38
PVT1-204ENST00000517525 ADGRL3Q9HAR2 1447 aa36.16■■■■□ 3.38
PVT1-204ENST00000517525 ROBO2Q9HCK4 1378 aa36.15■■■■□ 3.38
PVT1-204ENST00000517525 STAC3Q96MF2 364 aa36.12■■■■□ 3.37
PVT1-204ENST00000517525 C14orf93Q9H972 538 aaKnown RBP36.11■■■■□ 3.37
PVT1-204ENST00000517525 TECPR2O15040 1411 aa36.1■■■■□ 3.37
PVT1-204ENST00000517525 LRPPRCP42704 1394 aaKnown RBP36.09■■■■□ 3.37
PVT1-204ENST00000517525 ABCC11Q96J66 1382 aa36.08■■■■□ 3.37
PVT1-204ENST00000517525 MST1RQ04912 1400 aa36.04■■■■□ 3.36
PVT1-204ENST00000517525 ASXL1Q8IXJ9 1541 aa36.03■■■■□ 3.36
PVT1-204ENST00000517525 SIRT1Q96EB6 747 aa36.02■■■■□ 3.36
PVT1-204ENST00000517525 BRINP3Q76B58 766 aa36■■■■□ 3.35
PVT1-204ENST00000517525 MED1Q15648 1581 aaPredicted RBP36■■■■□ 3.35
PVT1-204ENST00000517525 NALCNQ8IZF0 1738 aa36■■■■□ 3.35
PVT1-204ENST00000517525 TMEM132EQ6IEE7 984 aa35.99■■■■□ 3.35
PVT1-204ENST00000517525 YTHDC2Q9H6S0 1430 aaKnown RBP35.99■■■■□ 3.35
PVT1-204ENST00000517525 LAMC1P11047 1609 aa35.97■■■■□ 3.35
PVT1-204ENST00000517525 CFAP70Q5T0N1 1121 aa35.97■■■■□ 3.35
PVT1-204ENST00000517525 AHDC1Q5TGY3 1603 aaPredicted RBP35.97■■■■□ 3.35
PVT1-204ENST00000517525 DHX57Q6P158 1386 aaKnown RBP35.96■■■■□ 3.35
PVT1-204ENST00000517525 DCAF11Q8TEB1 546 aa35.94■■■■□ 3.34
PVT1-204ENST00000517525 STK26Q9P289 416 aa35.94■■■■□ 3.34
PVT1-204ENST00000517525 KNDC1Q76NI1 1749 aa35.94■■■■□ 3.34
PVT1-204ENST00000517525 PHLPP1O60346 1717 aa35.91■■■■□ 3.34
PVT1-204ENST00000517525 COL16A1Q07092 1604 aaPredicted RBP35.9■■■■□ 3.34
PVT1-204ENST00000517525 JCADQ9P266 1359 aa35.9■■■■□ 3.34
PVT1-204ENST00000517525 C1orf167Q5SNV9 1468 aa35.9■■■■□ 3.34
PVT1-204ENST00000517525 WAPLQ7Z5K2 1190 aa35.88■■■■□ 3.33
PVT1-204ENST00000517525 CDC42BPGQ6DT37 1551 aa35.86■■■■□ 3.33
PVT1-204ENST00000517525 KDM2AQ9Y2K7 1162 aa35.86■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms