RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NBPF14Q5TI25 921 aa6.35□□□□□ -1.39
SCARNA13-201ENST00000516672 KRT27Q7Z3Y8 459 aa6.35□□□□□ -1.39
SCARNA13-201ENST00000516672 CAMKK2Q96RR4 588 aa6.35□□□□□ -1.39
SCARNA13-201ENST00000516672 FAM135AQ9P2D6 1515 aa6.35□□□□□ -1.39
SCARNA13-201ENST00000516672 SETD5Q9C0A6 1442 aa6.34□□□□□ -1.39
SCARNA13-201ENST00000516672 SEPT12Q8IYM1 358 aa6.34□□□□□ -1.39
SCARNA13-201ENST00000516672 PELP1Q8IZL8 1130 aaKnown RBP6.34□□□□□ -1.39
SCARNA13-201ENST00000516672 GLI3P10071 1580 aa6.34□□□□□ -1.39
SCARNA13-201ENST00000516672 ABCC3O15438 1527 aa6.34□□□□□ -1.39
SCARNA13-201ENST00000516672 PNPLA6Q8IY17 1366 aa6.33□□□□□ -1.4
SCARNA13-201ENST00000516672 UGGT1Q9NYU2 1555 aa6.33□□□□□ -1.4
SCARNA13-201ENST00000516672 PTGER2P43116 358 aa6.33□□□□□ -1.4
SCARNA13-201ENST00000516672 PRDM10Q9NQV6 1147 aa6.33□□□□□ -1.4
SCARNA13-201ENST00000516672 CACNA1AO00555 2505 aa6.33□□□□□ -1.4
SCARNA13-201ENST00000516672 TNRQ92752 1358 aa6.32□□□□□ -1.4
SCARNA13-201ENST00000516672 PRDM15P57071 1507 aaPredicted RBP6.32□□□□□ -1.4
SCARNA13-201ENST00000516672 UGGT2Q9NYU1 1516 aa6.32□□□□□ -1.4
SCARNA13-201ENST00000516672 SNX27Q96L92 541 aa6.32□□□□□ -1.4
SCARNA13-201ENST00000516672 KDM5AP29375 1690 aaKnown RBP6.32□□□□□ -1.4
SCARNA13-201ENST00000516672 ZNF518AQ6AHZ1 1483 aa6.31□□□□□ -1.4
SCARNA13-201ENST00000516672 TOMM70O94826 608 aa6.31□□□□□ -1.4
SCARNA13-201ENST00000516672 AFAP1Q8N556 730 aa6.31□□□□□ -1.4
SCARNA13-201ENST00000516672 LRRC59Q96AG4 307 aaKnown RBP6.31□□□□□ -1.4
SCARNA13-201ENST00000516672 CFAP44Q96MT7 982 aa6.31□□□□□ -1.4
SCARNA13-201ENST00000516672 NUP188Q5SRE5 1749 aa6.3□□□□□ -1.4
SCARNA13-201ENST00000516672 TNS1Q9HBL0 1735 aaKnown RBP6.3□□□□□ -1.4
SCARNA13-201ENST00000516672 ZBTB7AO95365 584 aa6.3□□□□□ -1.4
SCARNA13-201ENST00000516672 MAST1Q9Y2H9 1570 aa6.3□□□□□ -1.4
SCARNA13-201ENST00000516672 RREB1Q92766 1687 aa6.3□□□□□ -1.4
SCARNA13-201ENST00000516672 FOXN1O15353 648 aa6.29□□□□□ -1.4
SCARNA13-201ENST00000516672 ATF5Q9Y2D1 282 aaPredicted RBP6.29□□□□□ -1.4
SCARNA13-201ENST00000516672 GOLGB1Q14789 3259 aaKnown RBP6.29□□□□□ -1.4
SCARNA13-201ENST00000516672 ADCY9O60503 1353 aa6.29□□□□□ -1.4
SCARNA13-201ENST00000516672 PDE4DIPQ5VU43 2346 aa6.28□□□□□ -1.4
SCARNA13-201ENST00000516672 PTCH1Q13635 1447 aa6.28□□□□□ -1.4
SCARNA13-201ENST00000516672 KCNA6P17658 529 aa6.28□□□□□ -1.4
SCARNA13-201ENST00000516672 FBXO31Q5XUX0 539 aaPredicted RBP6.28□□□□□ -1.4
SCARNA13-201ENST00000516672 BRINP3Q76B58 766 aa6.28□□□□□ -1.4
SCARNA13-201ENST00000516672 PARD3Q8TEW0 1356 aa6.28□□□□□ -1.4
SCARNA13-201ENST00000516672 CASZ1Q86V15 1759 aa6.27□□□□□ -1.41
SCARNA13-201ENST00000516672 EFCAB6Q5THR3 1501 aa6.27□□□□□ -1.41
SCARNA13-201ENST00000516672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.27□□□□□ -1.41
SCARNA13-201ENST00000516672 HNRNPUL2Q1KMD3 747 aaKnown RBP6.27□□□□□ -1.41
SCARNA13-201ENST00000516672 HABP4Q5JVS0 413 aaKnown RBP6.27□□□□□ -1.41
SCARNA13-201ENST00000516672 GCC1Q96CN9 775 aa6.27□□□□□ -1.41
SCARNA13-201ENST00000516672 ADGRB2O60241 1585 aa6.27□□□□□ -1.41
SCARNA13-201ENST00000516672 PDGFDQ9GZP0 370 aaPredicted RBP6.26□□□□□ -1.41
SCARNA13-201ENST00000516672 HNRNPMP52272 730 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCARNA13-201ENST00000516672 FAM182BQ5T319 152 aa6.25□□□□□ -1.41
SCARNA13-201ENST00000516672 IGSF5Q9NSI5 407 aa6.25□□□□□ -1.41
SCARNA13-201ENST00000516672 DHX57Q6P158 1386 aaKnown RBP6.25□□□□□ -1.41
SCARNA13-201ENST00000516672 MAP3K5Q99683 1374 aa6.25□□□□□ -1.41
SCARNA13-201ENST00000516672 NKTRP30414 1462 aaKnown RBP6.24□□□□□ -1.41
SCARNA13-201ENST00000516672 NLRP1Q9C000 1473 aa6.24□□□□□ -1.41
SCARNA13-201ENST00000516672 MLH3Q9UHC1 1453 aa6.24□□□□□ -1.41
SCARNA13-201ENST00000516672 IGF1RP08069 1367 aa6.24□□□□□ -1.41
SCARNA13-201ENST00000516672 GRIN3BO60391 1043 aa6.23□□□□□ -1.41
SCARNA13-201ENST00000516672 APBA3O96018 575 aa6.23□□□□□ -1.41
SCARNA13-201ENST00000516672 MROH1Q8NDA8 1641 aa6.23□□□□□ -1.41
SCARNA13-201ENST00000516672 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.22□□□□□ -1.41
SCARNA13-201ENST00000516672 ASXL1Q8IXJ9 1541 aa6.22□□□□□ -1.41
SCARNA13-201ENST00000516672 CTCFP49711 727 aaPredicted RBP6.22□□□□□ -1.41
SCARNA13-201ENST00000516672 FXR1P51114 621 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCARNA13-201ENST00000516672 COL26A1Q96A83 441 aa6.22□□□□□ -1.41
SCARNA13-201ENST00000516672 A0A0G2JS52 829 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 ONECUT3O60422 494 aaPredicted RBP6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 YBX3P16989 372 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 LTKP29376 864 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 MYT1Q01538 1121 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 GGT6Q6P531 493 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 CADPS2Q86UW7 1296 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 UNC5CLQ8IV45 518 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 DDX17Q92841 729 aaKnown RBP6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 ARXQ96QS3 562 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 SGIP1Q9BQI5 828 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 SAMD9LQ8IVG5 1584 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 CUL9Q8IWT3 2517 aa6.21□□□□□ -1.42
SCARNA13-201ENST00000516672 FMN1Q68DA7 1419 aa6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 MIA2Q96PC5 1412 aa6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 TRIM37O94972 964 aa6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 MNX1P50219 401 aaPredicted RBP6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 LBX1P52954 281 aa6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 TXNDC2Q86VQ3 553 aa6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 RBM46Q8TBY0 533 aaKnown RBP6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 NCOA2Q15596 1464 aa6.2□□□□□ -1.42
SCARNA13-201ENST00000516672 ATF3P18847 181 aa6.19□□□□□ -1.42
SCARNA13-201ENST00000516672 A0A0C4DFX4 3053 aa6.19□□□□□ -1.42
SCARNA13-201ENST00000516672 ARHGAP35Q9NRY4 1499 aa6.18□□□□□ -1.42
SCARNA13-201ENST00000516672 PPP1R15AO75807 674 aaPredicted RBP6.18□□□□□ -1.42
SCARNA13-201ENST00000516672 FSTL1Q12841 308 aa6.18□□□□□ -1.42
SCARNA13-201ENST00000516672 EFCAB2Q5VUJ9 269 aa6.18□□□□□ -1.42
SCARNA13-201ENST00000516672 C14orf37Q86TY3 774 aa6.18□□□□□ -1.42
SCARNA13-201ENST00000516672 KLHL34Q8N239 644 aa6.18□□□□□ -1.42
SCARNA13-201ENST00000516672 PLA2G5P39877 138 aa6.17□□□□□ -1.42
SCARNA13-201ENST00000516672 AIDAQ96BJ3 306 aa6.17□□□□□ -1.42
SCARNA13-201ENST00000516672 CROCC2H7BZ55 1655 aa6.17□□□□□ -1.42
SCARNA13-201ENST00000516672 ABCC5O15440 1437 aa6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 PZPP20742 1482 aa6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 KIDINS220Q9ULH0 1771 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms