RNA–Protein interactions for RNA: ENST00000512883.1

ARHGEF28-211, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2 BASIC

Gene ARHGEF28, Length 2,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-211ENST00000512883 ADGRL2O95490 1459 aa20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 ESPNB1AK53 854 aa20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 TROQ12816 1431 aaPredicted RBP20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 MRE11P49959 708 aa20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
ARHGEF28-211ENST00000512883 TRIM44Q96DX7 344 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF28-211ENST00000512883 GRPEL1Q9HAV7 217 aa20.53■□□□□ 0.88
ARHGEF28-211ENST00000512883 NLRP1Q9C000 1473 aa20.53■□□□□ 0.88
ARHGEF28-211ENST00000512883 C9orf84Q5VXU9 1444 aa20.53■□□□□ 0.88
ARHGEF28-211ENST00000512883 E9PSI1 815 aa20.52■□□□□ 0.88
ARHGEF28-211ENST00000512883 TRMT2AQ8IZ69 625 aaKnown RBP20.52■□□□□ 0.88
ARHGEF28-211ENST00000512883 PCDHB15Q9Y5E8 787 aa20.52■□□□□ 0.88
ARHGEF28-211ENST00000512883 AMER1Q5JTC6 1135 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF28-211ENST00000512883 CHMP5Q9NZZ3 219 aa20.5■□□□□ 0.87
ARHGEF28-211ENST00000512883 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
ARHGEF28-211ENST00000512883 KDM5DQ9BY66 1539 aa20.5■□□□□ 0.87
ARHGEF28-211ENST00000512883 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
ARHGEF28-211ENST00000512883 MAGI2Q86UL8 1455 aa20.49■□□□□ 0.87
ARHGEF28-211ENST00000512883 TRPM1Q7Z4N2 1603 aa20.48■□□□□ 0.87
ARHGEF28-211ENST00000512883 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
ARHGEF28-211ENST00000512883 RLBP1P12271 317 aa20.46■□□□□ 0.87
ARHGEF28-211ENST00000512883 PMFBP1Q8TBY8 1022 aa20.46■□□□□ 0.87
ARHGEF28-211ENST00000512883 C22orf23Q9BZE7 217 aa20.46■□□□□ 0.87
ARHGEF28-211ENST00000512883 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
ARHGEF28-211ENST00000512883 VIRMAQ69YN4 1812 aaKnown RBP20.45■□□□□ 0.86
ARHGEF28-211ENST00000512883 RAPGEF6Q8TEU7 1601 aa20.44■□□□□ 0.86
ARHGEF28-211ENST00000512883 A2MP01023 1474 aa20.44■□□□□ 0.86
ARHGEF28-211ENST00000512883 GPRASP1Q5JY77 1395 aa20.44■□□□□ 0.86
ARHGEF28-211ENST00000512883 PLB1Q6P1J6 1458 aa20.43■□□□□ 0.86
ARHGEF28-211ENST00000512883 DISP1Q96F81 1524 aa20.42■□□□□ 0.86
ARHGEF28-211ENST00000512883 PLEKHD1A6NEE1 506 aa20.42■□□□□ 0.86
ARHGEF28-211ENST00000512883 GAS2L3Q86XJ1 694 aa20.42■□□□□ 0.86
ARHGEF28-211ENST00000512883 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
ARHGEF28-211ENST00000512883 ITSN2Q9NZM3 1697 aa20.41■□□□□ 0.86
ARHGEF28-211ENST00000512883 CROCC2H7BZ55 1655 aa20.41■□□□□ 0.86
ARHGEF28-211ENST00000512883 FOXD4L1Q9NU39 408 aa20.41■□□□□ 0.86
ARHGEF28-211ENST00000512883 DDX11L8A8MPP1 907 aa20.4■□□□□ 0.86
ARHGEF28-211ENST00000512883 WWC1Q8IX03 1113 aa20.4■□□□□ 0.86
ARHGEF28-211ENST00000512883 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.85
ARHGEF28-211ENST00000512883 RWDD1Q9H446 243 aaPredicted RBP20.39■□□□□ 0.85
ARHGEF28-211ENST00000512883 WDR7Q9Y4E6 1490 aa20.39■□□□□ 0.85
ARHGEF28-211ENST00000512883 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
ARHGEF28-211ENST00000512883 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
ARHGEF28-211ENST00000512883 RBM10P98175 930 aaKnown RBP20.38■□□□□ 0.85
ARHGEF28-211ENST00000512883 KIAA1211Q6ZU35 1233 aa20.38■□□□□ 0.85
ARHGEF28-211ENST00000512883 FAM135AQ9P2D6 1515 aa20.38■□□□□ 0.85
ARHGEF28-211ENST00000512883 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
ARHGEF28-211ENST00000512883 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF28-211ENST00000512883 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
ARHGEF28-211ENST00000512883 PTPRGP23470 1445 aa20.35■□□□□ 0.85
ARHGEF28-211ENST00000512883 ARID3AQ99856 593 aa20.35■□□□□ 0.85
ARHGEF28-211ENST00000512883 TNPO1Q92973 898 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-211ENST00000512883 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
ARHGEF28-211ENST00000512883 FBLN2P98095 1184 aa20.34■□□□□ 0.85
ARHGEF28-211ENST00000512883 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
ARHGEF28-211ENST00000512883 PLA2R1Q13018 1463 aa20.34■□□□□ 0.85
ARHGEF28-211ENST00000512883 TPM2P07951 284 aa20.33■□□□□ 0.84
ARHGEF28-211ENST00000512883 HSP90AB1P08238 724 aaKnown RBP20.32■□□□□ 0.84
ARHGEF28-211ENST00000512883 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
ARHGEF28-211ENST00000512883 PDCL3Q9H2J4 239 aa20.31■□□□□ 0.84
ARHGEF28-211ENST00000512883 CDCA8Q53HL2 280 aa20.31■□□□□ 0.84
ARHGEF28-211ENST00000512883 ZNF692Q9BU19 519 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF28-211ENST00000512883 FTSJ3Q8IY81 847 aaKnown RBP20.3■□□□□ 0.84
ARHGEF28-211ENST00000512883 CLASP1Q7Z460 1538 aa20.3■□□□□ 0.84
ARHGEF28-211ENST00000512883 ASXL1Q8IXJ9 1541 aa20.3■□□□□ 0.84
ARHGEF28-211ENST00000512883 NINLQ9Y2I6 1382 aa20.3■□□□□ 0.84
ARHGEF28-211ENST00000512883 CDC42BPAQ5VT25 1732 aa20.29■□□□□ 0.84
ARHGEF28-211ENST00000512883 ADCY10Q96PN6 1610 aa20.28■□□□□ 0.84
ARHGEF28-211ENST00000512883 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
ARHGEF28-211ENST00000512883 GBP4Q96PP9 640 aa20.27■□□□□ 0.84
ARHGEF28-211ENST00000512883 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
ARHGEF28-211ENST00000512883 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.84
ARHGEF28-211ENST00000512883 SHANK2Q9UPX8 1470 aa20.27■□□□□ 0.84
ARHGEF28-211ENST00000512883 RTEL1-TNFRSF6BF6WH68 1400 aa20.25■□□□□ 0.83
ARHGEF28-211ENST00000512883 MSNP26038 577 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-211ENST00000512883 NASPP49321 788 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-211ENST00000512883 ISY1Q9ULR0 285 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-211ENST00000512883 ANP32BQ92688 251 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-211ENST00000512883 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
ARHGEF28-211ENST00000512883 MVPQ14764 893 aaKnown RBP20.24■□□□□ 0.83
ARHGEF28-211ENST00000512883 R3HCC1Q9Y3T6 440 aaKnown RBP20.24■□□□□ 0.83
ARHGEF28-211ENST00000512883 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
ARHGEF28-211ENST00000512883 ITPRIPQ8IWB1 547 aa20.23■□□□□ 0.83
ARHGEF28-211ENST00000512883 NCLP19338 710 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-211ENST00000512883 ZSCAN30Q86W11 494 aa20.22■□□□□ 0.83
ARHGEF28-211ENST00000512883 DZIP1LQ8IYY4 767 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-211ENST00000512883 ABCC10Q5T3U5 1492 aa20.21■□□□□ 0.83
ARHGEF28-211ENST00000512883 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
ARHGEF28-211ENST00000512883 CCDC173Q0VFZ6 552 aa20.2■□□□□ 0.82
ARHGEF28-211ENST00000512883 ZKSCAN2Q63HK3 967 aa20.2■□□□□ 0.82
ARHGEF28-211ENST00000512883 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
ARHGEF28-211ENST00000512883 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
ARHGEF28-211ENST00000512883 DDX49Q9Y6V7 483 aaKnown RBP20.2■□□□□ 0.82
ARHGEF28-211ENST00000512883 SSFA2P28290 1259 aa20.2■□□□□ 0.82
ARHGEF28-211ENST00000512883 AAMPQ13685 434 aa20.2■□□□□ 0.82
ARHGEF28-211ENST00000512883 SKOR2Q2VWA4 1001 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms