RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.73□□□□□ -0.37
DEPDC1B-205ENST00000512078 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
DEPDC1B-205ENST00000512078 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
DEPDC1B-205ENST00000512078 EHBP1L1Q8N3D4 1523 aa12.72□□□□□ -0.37
DEPDC1B-205ENST00000512078 MTUS2Q5JR59 1369 aa12.72□□□□□ -0.37
DEPDC1B-205ENST00000512078 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
DEPDC1B-205ENST00000512078 SLC26A8Q96RN1 970 aa12.72□□□□□ -0.37
DEPDC1B-205ENST00000512078 MAST1Q9Y2H9 1570 aa12.71□□□□□ -0.38
DEPDC1B-205ENST00000512078 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
DEPDC1B-205ENST00000512078 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
DEPDC1B-205ENST00000512078 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
DEPDC1B-205ENST00000512078 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
DEPDC1B-205ENST00000512078 EP400Q96L91 3159 aa12.68□□□□□ -0.38
DEPDC1B-205ENST00000512078 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
DEPDC1B-205ENST00000512078 ADGRB3O60242 1522 aa12.66□□□□□ -0.38
DEPDC1B-205ENST00000512078 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
DEPDC1B-205ENST00000512078 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
DEPDC1B-205ENST00000512078 MSH5O43196 834 aa12.64□□□□□ -0.39
DEPDC1B-205ENST00000512078 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
DEPDC1B-205ENST00000512078 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
DEPDC1B-205ENST00000512078 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
DEPDC1B-205ENST00000512078 C8orf37Q96NL8 207 aa12.64□□□□□ -0.39
DEPDC1B-205ENST00000512078 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
DEPDC1B-205ENST00000512078 MYO5BQ9ULV0 1848 aa12.63□□□□□ -0.39
DEPDC1B-205ENST00000512078 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
DEPDC1B-205ENST00000512078 DUOX2Q9NRD8 1548 aa12.62□□□□□ -0.39
DEPDC1B-205ENST00000512078 ATF3P18847 181 aa12.61□□□□□ -0.39
DEPDC1B-205ENST00000512078 C19orf44Q9H6X5 657 aa12.61□□□□□ -0.39
DEPDC1B-205ENST00000512078 PLEKHG1Q9ULL1 1385 aa12.61□□□□□ -0.39
DEPDC1B-205ENST00000512078 IDI1Q13907 227 aa12.6□□□□□ -0.39
DEPDC1B-205ENST00000512078 C14orf37Q86TY3 774 aa12.6□□□□□ -0.39
DEPDC1B-205ENST00000512078 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
DEPDC1B-205ENST00000512078 ZFYVE9O95405 1425 aa12.59□□□□□ -0.39
DEPDC1B-205ENST00000512078 DCCP43146 1447 aa12.59□□□□□ -0.39
DEPDC1B-205ENST00000512078 BCANQ96GW7 911 aa12.59□□□□□ -0.39
DEPDC1B-205ENST00000512078 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
DEPDC1B-205ENST00000512078 LMTK2Q8IWU2 1503 aa12.58□□□□□ -0.4
DEPDC1B-205ENST00000512078 ATRNO75882 1429 aa12.57□□□□□ -0.4
DEPDC1B-205ENST00000512078 TRPC5Q9UL62 973 aaPredicted RBP12.57□□□□□ -0.4
DEPDC1B-205ENST00000512078 NOS1P29475 1434 aa12.57□□□□□ -0.4
DEPDC1B-205ENST00000512078 GCC2Q8IWJ2 1684 aa12.56□□□□□ -0.4
DEPDC1B-205ENST00000512078 ERBINQ96RT1 1412 aa12.56□□□□□ -0.4
DEPDC1B-205ENST00000512078 TBX22Q9Y458 520 aa12.56□□□□□ -0.4
DEPDC1B-205ENST00000512078 BLMP54132 1417 aaPredicted RBP12.55□□□□□ -0.4
DEPDC1B-205ENST00000512078 MST1RQ04912 1400 aa12.55□□□□□ -0.4
DEPDC1B-205ENST00000512078 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
DEPDC1B-205ENST00000512078 USP21Q9UK80 565 aa12.55□□□□□ -0.4
DEPDC1B-205ENST00000512078 LAMC1P11047 1609 aa12.54□□□□□ -0.4
DEPDC1B-205ENST00000512078 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
DEPDC1B-205ENST00000512078 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
DEPDC1B-205ENST00000512078 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
DEPDC1B-205ENST00000512078 MARF1Q9Y4F3 1742 aaKnown RBP12.53□□□□□ -0.4
DEPDC1B-205ENST00000512078 UNC13BO14795 1591 aa12.52□□□□□ -0.4
DEPDC1B-205ENST00000512078 ADAMTS2O95450 1211 aa12.52□□□□□ -0.4
DEPDC1B-205ENST00000512078 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.4
DEPDC1B-205ENST00000512078 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.4
DEPDC1B-205ENST00000512078 BRWD3Q6RI45 1802 aa12.52□□□□□ -0.4
DEPDC1B-205ENST00000512078 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.41
DEPDC1B-205ENST00000512078 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
DEPDC1B-205ENST00000512078 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
DEPDC1B-205ENST00000512078 CROCC2H7BZ55 1655 aa12.52□□□□□ -0.41
DEPDC1B-205ENST00000512078 KANK1Q14678 1352 aa12.51□□□□□ -0.41
DEPDC1B-205ENST00000512078 XRN1Q8IZH2 1706 aaKnown RBP12.51□□□□□ -0.41
DEPDC1B-205ENST00000512078 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.51□□□□□ -0.41
DEPDC1B-205ENST00000512078 TRPM2O94759 1503 aa12.51□□□□□ -0.41
DEPDC1B-205ENST00000512078 COL22A1Q8NFW1 1626 aaPredicted RBP12.51□□□□□ -0.41
DEPDC1B-205ENST00000512078 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
DEPDC1B-205ENST00000512078 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
DEPDC1B-205ENST00000512078 HDGFP51858 240 aaKnown RBP12.49□□□□□ -0.41
DEPDC1B-205ENST00000512078 DEFB132Q7Z7B7 95 aa12.49□□□□□ -0.41
DEPDC1B-205ENST00000512078 DDX17Q92841 729 aaKnown RBP12.47□□□□□ -0.41
DEPDC1B-205ENST00000512078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■□□□ 11.6
DEPDC1B-205ENST00000512078 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
DEPDC1B-205ENST00000512078 HRCP23327 699 aa12.47□□□□□ -0.41
DEPDC1B-205ENST00000512078 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
DEPDC1B-205ENST00000512078 YY1P25490 414 aa12.46□□□□□ -0.42
DEPDC1B-205ENST00000512078 IFFO2Q5TF58 517 aa12.46□□□□□ -0.42
DEPDC1B-205ENST00000512078 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.42
DEPDC1B-205ENST00000512078 GLI3P10071 1580 aa12.45□□□□□ -0.42
DEPDC1B-205ENST00000512078 AMOTL2Q9Y2J4 779 aa12.45□□□□□ -0.42
DEPDC1B-205ENST00000512078 MYOM3Q5VTT5 1437 aa12.44□□□□□ -0.42
DEPDC1B-205ENST00000512078 SF3B2Q13435 895 aaKnown RBP12.44□□□□□ -0.42
DEPDC1B-205ENST00000512078 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.44□□□□□ -0.42
DEPDC1B-205ENST00000512078 PSDA5PKW4 1024 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1B-205ENST00000512078 GJD4Q96KN9 370 aaPredicted RBP12.43□□□□□ -0.42
DEPDC1B-205ENST00000512078 ADGRL3Q9HAR2 1447 aa12.43□□□□□ -0.42
DEPDC1B-205ENST00000512078 MYOM2P54296 1465 aa12.43□□□□□ -0.42
DEPDC1B-205ENST00000512078 SOS2Q07890 1332 aaPredicted RBP12.42□□□□□ -0.42
DEPDC1B-205ENST00000512078 NRXN3Q9Y4C0 1643 aa12.42□□□□□ -0.42
DEPDC1B-205ENST00000512078 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
DEPDC1B-205ENST00000512078 RALGAPBQ86X10 1494 aa12.41□□□□□ -0.42
DEPDC1B-205ENST00000512078 RRP7BPQ9NSQ0 103 aa12.4□□□□□ -0.42
DEPDC1B-205ENST00000512078 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
DEPDC1B-205ENST00000512078 ABCC5O15440 1437 aa12.39□□□□□ -0.43
DEPDC1B-205ENST00000512078 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
DEPDC1B-205ENST00000512078 SLIT2O94813 1529 aa12.37□□□□□ -0.43
DEPDC1B-205ENST00000512078 BAG6P46379 1132 aa12.36□□□□□ -0.43
DEPDC1B-205ENST00000512078 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
DEPDC1B-205ENST00000512078 UNC5CLQ8IV45 518 aa12.34□□□□□ -0.43
DEPDC1B-205ENST00000512078 DAPK1P53355 1430 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms