RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 RIMS2Q9UQ26 1411 aa25.59■■□□□ 1.69
CLDND1-221ENST00000510541 KIF1BO60333 1816 aa25.58■■□□□ 1.68
CLDND1-221ENST00000510541 RPGRIP1LQ68CZ1 1315 aa25.57■■□□□ 1.68
CLDND1-221ENST00000510541 CPS1P31327 1500 aa25.56■■□□□ 1.68
CLDND1-221ENST00000510541 CCDC144AA2RUR9 1427 aa25.54■■□□□ 1.68
CLDND1-221ENST00000510541 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
CLDND1-221ENST00000510541 CERKQ8TCT0 537 aa25.53■■□□□ 1.68
CLDND1-221ENST00000510541 DIP2AQ14689 1571 aa25.51■■□□□ 1.67
CLDND1-221ENST00000510541 ZNF335Q9H4Z2 1342 aaPredicted RBP25.5■■□□□ 1.67
CLDND1-221ENST00000510541 SPATA31E1Q6ZUB1 1445 aa25.49■■□□□ 1.67
CLDND1-221ENST00000510541 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
CLDND1-221ENST00000510541 ANKRD30BQ9BXX2 1392 aa25.49■■□□□ 1.67
CLDND1-221ENST00000510541 TBX22Q9Y458 520 aa25.49■■□□□ 1.67
CLDND1-221ENST00000510541 NEXMIFQ5QGS0 1516 aa25.48■■□□□ 1.67
CLDND1-221ENST00000510541 CHGAP10645 457 aaKnown RBP25.47■■□□□ 1.67
CLDND1-221ENST00000510541 SETBP1Q9Y6X0 1596 aa25.47■■□□□ 1.67
CLDND1-221ENST00000510541 VGFO15240 615 aaPredicted RBP25.44■■□□□ 1.66
CLDND1-221ENST00000510541 FOXD1Q16676 465 aa25.44■■□□□ 1.66
CLDND1-221ENST00000510541 ADAMTS13Q76LX8 1427 aa25.44■■□□□ 1.66
CLDND1-221ENST00000510541 PPP1R15AO75807 674 aaPredicted RBP25.43■■□□□ 1.66
CLDND1-221ENST00000510541 FBXO41Q8TF61 875 aa25.42■■□□□ 1.66
CLDND1-221ENST00000510541 NWD1Q149M9 1564 aa25.42■■□□□ 1.66
CLDND1-221ENST00000510541 KCNA6P17658 529 aa25.41■■□□□ 1.66
CLDND1-221ENST00000510541 STAC3Q96MF2 364 aa25.41■■□□□ 1.66
CLDND1-221ENST00000510541 NKTRP30414 1462 aaKnown RBP25.4■■□□□ 1.66
CLDND1-221ENST00000510541 PPLO60437 1756 aa25.39■■□□□ 1.66
CLDND1-221ENST00000510541 ZNF326Q5BKZ1 582 aaKnown RBP25.39■■□□□ 1.66
CLDND1-221ENST00000510541 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
CLDND1-221ENST00000510541 STRCP1A6NGW2 1772 aa25.37■■□□□ 1.65
CLDND1-221ENST00000510541 CHD2O14647 1828 aaKnown RBP25.36■■□□□ 1.65
CLDND1-221ENST00000510541 NCOA3Q9Y6Q9 1424 aa25.36■■□□□ 1.65
CLDND1-221ENST00000510541 LRRC7Q96NW7 1537 aa25.35■■□□□ 1.65
CLDND1-221ENST00000510541 IFT172Q9UG01 1749 aa25.34■■□□□ 1.65
CLDND1-221ENST00000510541 SLC26A8Q96RN1 970 aa25.34■■□□□ 1.65
CLDND1-221ENST00000510541 PRAG1Q86YV5 1406 aa25.34■■□□□ 1.65
CLDND1-221ENST00000510541 MYOM2P54296 1465 aa25.31■■□□□ 1.64
CLDND1-221ENST00000510541 NRXN1Q9ULB1 1477 aa25.3■■□□□ 1.64
CLDND1-221ENST00000510541 BCANQ96GW7 911 aa25.27■■□□□ 1.64
CLDND1-221ENST00000510541 SETD1AO15047 1707 aaKnown RBP25.26■■□□□ 1.63
CLDND1-221ENST00000510541 NUTM2DQ5VT03 806 aaPredicted RBP25.25■■□□□ 1.63
CLDND1-221ENST00000510541 PIK3C2GO75747 1445 aa25.25■■□□□ 1.63
CLDND1-221ENST00000510541 ALKQ9UM73 1620 aa25.25■■□□□ 1.63
CLDND1-221ENST00000510541 XRN1Q8IZH2 1706 aaKnown RBP25.24■■□□□ 1.63
CLDND1-221ENST00000510541 RGL3Q3MIN7 710 aa25.22■■□□□ 1.63
CLDND1-221ENST00000510541 PTPRUQ92729 1446 aa25.21■■□□□ 1.63
CLDND1-221ENST00000510541 XIRP1Q702N8 1843 aaKnown RBP25.21■■□□□ 1.63
CLDND1-221ENST00000510541 ILDR1Q86SU0 546 aaPredicted RBP25.21■■□□□ 1.63
CLDND1-221ENST00000510541 METP08581 1390 aa25.2■■□□□ 1.63
CLDND1-221ENST00000510541 DHX57Q6P158 1386 aaKnown RBP25.2■■□□□ 1.63
CLDND1-221ENST00000510541 TOM1O60784 492 aa25.2■■□□□ 1.62
CLDND1-221ENST00000510541 TMEM94Q12767 1356 aa25.19■■□□□ 1.62
CLDND1-221ENST00000510541 ADGRF5Q8IZF2 1346 aa25.19■■□□□ 1.62
CLDND1-221ENST00000510541 LAMC1P11047 1609 aa25.19■■□□□ 1.62
CLDND1-221ENST00000510541 AMOTL2Q9Y2J4 779 aa25.18■■□□□ 1.62
CLDND1-221ENST00000510541 PTCH1Q13635 1447 aa25.18■■□□□ 1.62
CLDND1-221ENST00000510541 PROSER2Q86WR7 435 aaPredicted RBP25.17■■□□□ 1.62
CLDND1-221ENST00000510541 C14orf93Q9H972 538 aaKnown RBP25.16■■□□□ 1.62
CLDND1-221ENST00000510541 TECPR2O15040 1411 aa25.15■■□□□ 1.62
CLDND1-221ENST00000510541 DCCP43146 1447 aa25.13■■□□□ 1.61
CLDND1-221ENST00000510541 SIRT1Q96EB6 747 aa25.13■■□□□ 1.61
CLDND1-221ENST00000510541 ABCC11Q96J66 1382 aa25.12■■□□□ 1.61
CLDND1-221ENST00000510541 UBAP1LF5GYI3 381 aa25.11■■□□□ 1.61
CLDND1-221ENST00000510541 LRPPRCP42704 1394 aaKnown RBP25.09■■□□□ 1.61
CLDND1-221ENST00000510541 MSH6P52701 1360 aa25.09■■□□□ 1.61
CLDND1-221ENST00000510541 C19orf44Q9H6X5 657 aa25.09■■□□□ 1.61
CLDND1-221ENST00000510541 KNDC1Q76NI1 1749 aa25.07■■□□□ 1.6
CLDND1-221ENST00000510541 FAM135BQ49AJ0 1406 aa25.06■■□□□ 1.6
CLDND1-221ENST00000510541 DCAF11Q8TEB1 546 aa25.06■■□□□ 1.6
CLDND1-221ENST00000510541 CLSPNQ9HAW4 1339 aa25.06■■□□□ 1.6
CLDND1-221ENST00000510541 ASXL1Q8IXJ9 1541 aa25.06■■□□□ 1.6
CLDND1-221ENST00000510541 KIAA1210Q9ULL0 1709 aa25.04■■□□□ 1.6
CLDND1-221ENST00000510541 CADPS2Q86UW7 1296 aa25.03■■□□□ 1.6
CLDND1-221ENST00000510541 YTHDC2Q9H6S0 1430 aaKnown RBP25.03■■□□□ 1.6
CLDND1-221ENST00000510541 ADGRL3Q9HAR2 1447 aa25.03■■□□□ 1.6
CLDND1-221ENST00000510541 ADGRB1O14514 1584 aa25.02■■□□□ 1.6
CLDND1-221ENST00000510541 DLC1Q96QB1 1528 aa25.02■■□□□ 1.6
CLDND1-221ENST00000510541 ROBO2Q9HCK4 1378 aa25.01■■□□□ 1.59
CLDND1-221ENST00000510541 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
CLDND1-221ENST00000510541 SIPA1L2Q9P2F8 1722 aaPredicted RBP25■■□□□ 1.59
CLDND1-221ENST00000510541 CFAP70Q5T0N1 1121 aa24.99■■□□□ 1.59
CLDND1-221ENST00000510541 SLAIN2Q9P270 581 aa24.96■■□□□ 1.59
CLDND1-221ENST00000510541 ATF3P18847 181 aa24.94■■□□□ 1.58
CLDND1-221ENST00000510541 L3MBTL2Q969R5 705 aa24.94■■□□□ 1.58
CLDND1-221ENST00000510541 SIN3AQ96ST3 1273 aa24.94■■□□□ 1.58
CLDND1-221ENST00000510541 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
CLDND1-221ENST00000510541 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
CLDND1-221ENST00000510541 NALCNQ8IZF0 1738 aa24.92■■□□□ 1.58
CLDND1-221ENST00000510541 TMEM132EQ6IEE7 984 aa24.92■■□□□ 1.58
CLDND1-221ENST00000510541 RBM33Q96EV2 1170 aaKnown RBP24.91■■□□□ 1.58
CLDND1-221ENST00000510541 CDC42BPGQ6DT37 1551 aa24.91■■□□□ 1.58
CLDND1-221ENST00000510541 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
CLDND1-221ENST00000510541 TIMELESSQ9UNS1 1208 aa24.9■■□□□ 1.58
CLDND1-221ENST00000510541 MST1RQ04912 1400 aa24.88■■□□□ 1.57
CLDND1-221ENST00000510541 ROBO1Q9Y6N7 1651 aa24.86■■□□□ 1.57
CLDND1-221ENST00000510541 PIP4K2BP78356 416 aa24.86■■□□□ 1.57
CLDND1-221ENST00000510541 ADGRB2O60241 1585 aa24.84■■□□□ 1.57
CLDND1-221ENST00000510541 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
CLDND1-221ENST00000510541 STK26Q9P289 416 aa24.83■■□□□ 1.57
CLDND1-221ENST00000510541 TONSLQ96HA7 1378 aa24.82■■□□□ 1.56
CLDND1-221ENST00000510541 AHDC1Q5TGY3 1603 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms