RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
SNF8-207ENST00000509995 NUTM2AQ8IVF1 878 aaPredicted RBP17.71■□□□□ 0.43
SNF8-207ENST00000509995 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
SNF8-207ENST00000509995 RBM6P78332 1123 aaKnown RBP17.7■□□□□ 0.42
SNF8-207ENST00000509995 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
SNF8-207ENST00000509995 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
SNF8-207ENST00000509995 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
SNF8-207ENST00000509995 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
SNF8-207ENST00000509995 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
SNF8-207ENST00000509995 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.42
SNF8-207ENST00000509995 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
SNF8-207ENST00000509995 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
SNF8-207ENST00000509995 LRP5O75197 1615 aa17.63■□□□□ 0.41
SNF8-207ENST00000509995 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
SNF8-207ENST00000509995 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
SNF8-207ENST00000509995 C8orf37Q96NL8 207 aa17.61■□□□□ 0.41
SNF8-207ENST00000509995 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
SNF8-207ENST00000509995 NGLY1Q96IV0 654 aa17.6■□□□□ 0.41
SNF8-207ENST00000509995 NHSL1Q5SYE7 1610 aa17.6■□□□□ 0.41
SNF8-207ENST00000509995 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.41
SNF8-207ENST00000509995 BRINP3Q76B58 766 aa17.58■□□□□ 0.4
SNF8-207ENST00000509995 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
SNF8-207ENST00000509995 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
SNF8-207ENST00000509995 ATF3P18847 181 aa17.57■□□□□ 0.4
SNF8-207ENST00000509995 IDI1Q13907 227 aa17.57■□□□□ 0.4
SNF8-207ENST00000509995 BCANQ96GW7 911 aa17.57■□□□□ 0.4
SNF8-207ENST00000509995 C19orf44Q9H6X5 657 aa17.56■□□□□ 0.4
SNF8-207ENST00000509995 PLEKHG1Q9ULL1 1385 aa17.54■□□□□ 0.4
SNF8-207ENST00000509995 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
SNF8-207ENST00000509995 ZFYVE9O95405 1425 aa17.53■□□□□ 0.4
SNF8-207ENST00000509995 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.4
SNF8-207ENST00000509995 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.39
SNF8-207ENST00000509995 DCCP43146 1447 aa17.5■□□□□ 0.39
SNF8-207ENST00000509995 ERBINQ96RT1 1412 aa17.5■□□□□ 0.39
SNF8-207ENST00000509995 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
SNF8-207ENST00000509995 NOS1P29475 1434 aa17.49■□□□□ 0.39
SNF8-207ENST00000509995 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
SNF8-207ENST00000509995 TRPC5Q9UL62 973 aaPredicted RBP17.47■□□□□ 0.39
SNF8-207ENST00000509995 TBX22Q9Y458 520 aa17.47■□□□□ 0.39
SNF8-207ENST00000509995 GCC2Q8IWJ2 1684 aa17.46■□□□□ 0.39
SNF8-207ENST00000509995 ADAMTS2O95450 1211 aa17.46■□□□□ 0.39
SNF8-207ENST00000509995 USP21Q9UK80 565 aa17.46■□□□□ 0.39
SNF8-207ENST00000509995 ATRNO75882 1429 aa17.46■□□□□ 0.39
SNF8-207ENST00000509995 MST1RQ04912 1400 aa17.46■□□□□ 0.39
SNF8-207ENST00000509995 KANK1Q14678 1352 aa17.45■□□□□ 0.38
SNF8-207ENST00000509995 KIF15Q9NS87 1388 aa17.45■□□□□ 0.38
SNF8-207ENST00000509995 PPP1R15AO75807 674 aaPredicted RBP17.45■□□□□ 0.38
SNF8-207ENST00000509995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■■■■□ 19.4
SNF8-207ENST00000509995 RIMS2Q9UQ26 1411 aa17.45■□□□□ 0.38
SNF8-207ENST00000509995 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
SNF8-207ENST00000509995 PIK3R4Q99570 1358 aa17.43■□□□□ 0.38
SNF8-207ENST00000509995 SLC52A1Q9NWF4 448 aa17.43■□□□□ 0.38
SNF8-207ENST00000509995 BLMP54132 1417 aaPredicted RBP17.43■□□□□ 0.38
SNF8-207ENST00000509995 CROCC2H7BZ55 1655 aa17.42■□□□□ 0.38
SNF8-207ENST00000509995 TMEM131LA2VDJ0 1609 aa17.41■□□□□ 0.38
SNF8-207ENST00000509995 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
SNF8-207ENST00000509995 TRPM2O94759 1503 aa17.41■□□□□ 0.38
SNF8-207ENST00000509995 DDX17Q92841 729 aaKnown RBP17.4■□□□□ 0.38
SNF8-207ENST00000509995 PTCH1Q13635 1447 aa17.39■□□□□ 0.38
SNF8-207ENST00000509995 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
SNF8-207ENST00000509995 LAMC1P11047 1609 aa17.38■□□□□ 0.37
SNF8-207ENST00000509995 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
SNF8-207ENST00000509995 DEFB132Q7Z7B7 95 aa17.37■□□□□ 0.37
SNF8-207ENST00000509995 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
SNF8-207ENST00000509995 PTPRUQ92729 1446 aa17.37■□□□□ 0.37
SNF8-207ENST00000509995 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
SNF8-207ENST00000509995 UNC13BO14795 1591 aa17.36■□□□□ 0.37
SNF8-207ENST00000509995 AMOTL2Q9Y2J4 779 aa17.35■□□□□ 0.37
SNF8-207ENST00000509995 RPRD2Q5VT52 1461 aaKnown RBP17.35■□□□□ 0.37
SNF8-207ENST00000509995 COL22A1Q8NFW1 1626 aaPredicted RBP17.35■□□□□ 0.37
SNF8-207ENST00000509995 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
SNF8-207ENST00000509995 RRP7BPQ9NSQ0 103 aa17.34■□□□□ 0.37
SNF8-207ENST00000509995 MARF1Q9Y4F3 1742 aaKnown RBP17.34■□□□□ 0.37
SNF8-207ENST00000509995 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.37
SNF8-207ENST00000509995 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNF8-207ENST00000509995 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.36
SNF8-207ENST00000509995 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.33■□□□□ 0.36
SNF8-207ENST00000509995 HRCP23327 699 aa17.32■□□□□ 0.36
SNF8-207ENST00000509995 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
SNF8-207ENST00000509995 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
SNF8-207ENST00000509995 YY1P25490 414 aa17.3■□□□□ 0.36
SNF8-207ENST00000509995 GLI3P10071 1580 aa17.29■□□□□ 0.36
SNF8-207ENST00000509995 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
SNF8-207ENST00000509995 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
SNF8-207ENST00000509995 ABCC5O15440 1437 aa17.29■□□□□ 0.36
SNF8-207ENST00000509995 SOS2Q07890 1332 aaPredicted RBP17.28■□□□□ 0.36
SNF8-207ENST00000509995 MYOM2P54296 1465 aa17.28■□□□□ 0.36
SNF8-207ENST00000509995 NRXN3Q9Y4C0 1643 aa17.27■□□□□ 0.36
SNF8-207ENST00000509995 C1orf167Q5SNV9 1468 aa17.26■□□□□ 0.35
SNF8-207ENST00000509995 RALGAPBQ86X10 1494 aa17.25■□□□□ 0.35
SNF8-207ENST00000509995 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
SNF8-207ENST00000509995 IFFO2Q5TF58 517 aa17.22■□□□□ 0.35
SNF8-207ENST00000509995 DAPK1P53355 1430 aa17.21■□□□□ 0.35
SNF8-207ENST00000509995 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
SNF8-207ENST00000509995 ANKRD30AQ9BXX3 1397 aa17.18■□□□□ 0.34
SNF8-207ENST00000509995 SLIT2O94813 1529 aa17.17■□□□□ 0.34
SNF8-207ENST00000509995 BAG6P46379 1132 aa17.17■□□□□ 0.34
SNF8-207ENST00000509995 ORAI2Q96SN7 254 aa17.17■□□□□ 0.34
SNF8-207ENST00000509995 IQGAP3Q86VI3 1631 aa17.17■□□□□ 0.34
SNF8-207ENST00000509995 METP08581 1390 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms