RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 KIAA1210Q9ULL0 1709 aa23.82■■□□□ 1.4
CCHCR1-228ENST00000509552 SLC24A1O60721 1099 aa23.81■■□□□ 1.4
CCHCR1-228ENST00000509552 CDCA7LQ96GN5 454 aa23.81■■□□□ 1.4
CCHCR1-228ENST00000509552 ASXL2Q76L83 1435 aa23.8■■□□□ 1.4
CCHCR1-228ENST00000509552 PPP2R1AP30153 589 aa23.79■■□□□ 1.4
CCHCR1-228ENST00000509552 AMER1Q5JTC6 1135 aaPredicted RBP23.78■■□□□ 1.4
CCHCR1-228ENST00000509552 EXOC6Q8TAG9 804 aa23.78■■□□□ 1.4
CCHCR1-228ENST00000509552 WDR43Q15061 677 aaKnown RBP eCLIP23.77■■□□□ 1.4
CCHCR1-228ENST00000509552 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.4
CCHCR1-228ENST00000509552 ADAMTS8Q9UP79 889 aa23.77■■□□□ 1.4
CCHCR1-228ENST00000509552 ASXL1Q8IXJ9 1541 aa23.76■■□□□ 1.39
CCHCR1-228ENST00000509552 MYOM2P54296 1465 aa23.76■■□□□ 1.39
CCHCR1-228ENST00000509552 MAP3K4Q9Y6R4 1608 aa23.75■■□□□ 1.39
CCHCR1-228ENST00000509552 EFCAB6Q5THR3 1501 aa23.75■■□□□ 1.39
CCHCR1-228ENST00000509552 NPC1L1Q9UHC9 1359 aa23.74■■□□□ 1.39
CCHCR1-228ENST00000509552 KIF1BO60333 1816 aa23.73■■□□□ 1.39
CCHCR1-228ENST00000509552 KDM5AP29375 1690 aaKnown RBP23.73■■□□□ 1.39
CCHCR1-228ENST00000509552 ZNF518AQ6AHZ1 1483 aa23.73■■□□□ 1.39
CCHCR1-228ENST00000509552 CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
CCHCR1-228ENST00000509552 KIDINS220Q9ULH0 1771 aa23.71■■□□□ 1.39
CCHCR1-228ENST00000509552 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
CCHCR1-228ENST00000509552 NPM1P06748 294 aaKnown RBP eCLIP23.71■■□□□ 1.39
CCHCR1-228ENST00000509552 MYOM1P52179 1685 aa23.71■■□□□ 1.39
CCHCR1-228ENST00000509552 PIK3C2GO75747 1445 aa23.7■■□□□ 1.39
CCHCR1-228ENST00000509552 ADGRF5Q8IZF2 1346 aa23.7■■□□□ 1.38
CCHCR1-228ENST00000509552 ABCA6Q8N139 1617 aa23.7■■□□□ 1.38
CCHCR1-228ENST00000509552 LMTK2Q8IWU2 1503 aa23.69■■□□□ 1.38
CCHCR1-228ENST00000509552 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
CCHCR1-228ENST00000509552 ANP32AP39687 249 aaKnown RBP23.66■■□□□ 1.38
CCHCR1-228ENST00000509552 IFT172Q9UG01 1749 aa23.66■■□□□ 1.38
CCHCR1-228ENST00000509552 TCERG1O14776 1098 aaKnown RBP23.65■■□□□ 1.38
CCHCR1-228ENST00000509552 ERVK-7P63135 1459 aa23.64■■□□□ 1.38
CCHCR1-228ENST00000509552 PLIN1O60240 522 aa23.64■■□□□ 1.37
CCHCR1-228ENST00000509552 CFAP74Q9C0B2 1584 aa23.63■■□□□ 1.37
CCHCR1-228ENST00000509552 NRXN1Q9ULB1 1477 aa23.63■■□□□ 1.37
CCHCR1-228ENST00000509552 NOP58Q9Y2X3 529 aaKnown RBP23.63■■□□□ 1.37
CCHCR1-228ENST00000509552 PLEKHH1Q9ULM0 1364 aa23.62■■□□□ 1.37
CCHCR1-228ENST00000509552 MROH2AA6NES4 1674 aa23.62■■□□□ 1.37
CCHCR1-228ENST00000509552 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
CCHCR1-228ENST00000509552 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
CCHCR1-228ENST00000509552 CD109Q6YHK3 1445 aa23.6■■□□□ 1.37
CCHCR1-228ENST00000509552 SBNO2Q9Y2G9 1366 aa23.6■■□□□ 1.37
CCHCR1-228ENST00000509552 ADGRB3O60242 1522 aa23.6■■□□□ 1.37
CCHCR1-228ENST00000509552 CRBNQ96SW2 442 aa23.59■■□□□ 1.37
CCHCR1-228ENST00000509552 NOS1P29475 1434 aa23.59■■□□□ 1.37
CCHCR1-228ENST00000509552 POGZQ7Z3K3 1410 aa23.59■■□□□ 1.37
CCHCR1-228ENST00000509552 ZNF521Q96K83 1311 aa23.59■■□□□ 1.37
CCHCR1-228ENST00000509552 DUSP27Q5VZP5 1158 aa23.59■■□□□ 1.37
CCHCR1-228ENST00000509552 MYO3AQ8NEV4 1616 aa23.58■■□□□ 1.37
CCHCR1-228ENST00000509552 MLH3Q9UHC1 1453 aa23.58■■□□□ 1.37
CCHCR1-228ENST00000509552 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
CCHCR1-228ENST00000509552 CENPJQ9HC77 1338 aaPredicted RBP23.57■■□□□ 1.36
CCHCR1-228ENST00000509552 IPO9Q96P70 1041 aaKnown RBP23.56■■□□□ 1.36
CCHCR1-228ENST00000509552 MS4A1P11836 297 aa23.56■■□□□ 1.36
CCHCR1-228ENST00000509552 GGT6Q6P531 493 aa23.56■■□□□ 1.36
CCHCR1-228ENST00000509552 NPATQ14207 1427 aa23.55■■□□□ 1.36
CCHCR1-228ENST00000509552 OSCARQ8IYS5 282 aa23.55■■□□□ 1.36
CCHCR1-228ENST00000509552 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.54■■□□□ 1.36
CCHCR1-228ENST00000509552 CARD14Q9BXL6 1004 aa23.54■■□□□ 1.36
CCHCR1-228ENST00000509552 HECW2Q9P2P5 1572 aa23.54■■□□□ 1.36
CCHCR1-228ENST00000509552 FRMPD1Q5SYB0 1578 aa23.52■■□□□ 1.36
CCHCR1-228ENST00000509552 SLFN5Q08AF3 891 aa23.52■■□□□ 1.36
CCHCR1-228ENST00000509552 CCDC146Q8IYE0 955 aa23.52■■□□□ 1.36
CCHCR1-228ENST00000509552 RPGRIP1LQ68CZ1 1315 aa23.52■■□□□ 1.36
CCHCR1-228ENST00000509552 C14orf93Q9H972 538 aaKnown RBP23.51■■□□□ 1.35
CCHCR1-228ENST00000509552 PDE4AP27815 886 aa23.5■■□□□ 1.35
CCHCR1-228ENST00000509552 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
CCHCR1-228ENST00000509552 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
CCHCR1-228ENST00000509552 PPLO60437 1756 aa23.5■■□□□ 1.35
CCHCR1-228ENST00000509552 ZBTB47Q9UFB7 747 aaPredicted RBP23.49■■□□□ 1.35
CCHCR1-228ENST00000509552 APAF1O14727 1248 aa23.49■■□□□ 1.35
CCHCR1-228ENST00000509552 C20orf194Q5TEA3 1177 aa23.49■■□□□ 1.35
CCHCR1-228ENST00000509552 PAK3O75914 559 aaPredicted RBP23.48■■□□□ 1.35
CCHCR1-228ENST00000509552 TRMT2AQ8IZ69 625 aaKnown RBP23.47■■□□□ 1.35
CCHCR1-228ENST00000509552 CFAP65Q6ZU64 1925 aaKnown RBP23.47■■□□□ 1.35
CCHCR1-228ENST00000509552 ABCC3O15438 1527 aa23.47■■□□□ 1.35
CCHCR1-228ENST00000509552 BACH2Q9BYV9 841 aa23.46■■□□□ 1.35
CCHCR1-228ENST00000509552 POLR3AO14802 1390 aaPredicted RBP23.45■■□□□ 1.34
CCHCR1-228ENST00000509552 E9PSI1 815 aa23.44■■□□□ 1.34
CCHCR1-228ENST00000509552 ADGRB1O14514 1584 aa23.44■■□□□ 1.34
CCHCR1-228ENST00000509552 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
CCHCR1-228ENST00000509552 NSD3Q9BZ95 1437 aa23.43■■□□□ 1.34
CCHCR1-228ENST00000509552 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
CCHCR1-228ENST00000509552 MORC1Q86VD1 984 aa23.43■■□□□ 1.34
CCHCR1-228ENST00000509552 NEO1Q92859 1461 aa23.43■■□□□ 1.34
CCHCR1-228ENST00000509552 ZC3H13Q5T200 1668 aaKnown RBP23.42■■□□□ 1.34
CCHCR1-228ENST00000509552 TMEM132EQ6IEE7 984 aa23.42■■□□□ 1.34
CCHCR1-228ENST00000509552 CAMSAP1Q5T5Y3 1602 aa23.41■■□□□ 1.34
CCHCR1-228ENST00000509552 CENPQQ7L2Z9 268 aaPredicted RBP23.41■■□□□ 1.34
CCHCR1-228ENST00000509552 NPM2Q86SE8 214 aaKnown RBP23.41■■□□□ 1.34
CCHCR1-228ENST00000509552 SLC12A5Q9H2X9 1139 aa23.4■■□□□ 1.34
CCHCR1-228ENST00000509552 VGFO15240 615 aaPredicted RBP23.39■■□□□ 1.34
CCHCR1-228ENST00000509552 KDM2BQ8NHM5 1336 aa23.39■■□□□ 1.34
CCHCR1-228ENST00000509552 SPINK5Q9NQ38 1064 aaPredicted RBP23.38■■□□□ 1.33
CCHCR1-228ENST00000509552 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
CCHCR1-228ENST00000509552 PUS7Q96PZ0 661 aaKnown RBP23.37■■□□□ 1.33
CCHCR1-228ENST00000509552 CGNL1Q0VF96 1302 aa23.35■■□□□ 1.33
CCHCR1-228ENST00000509552 EVC2Q86UK5 1308 aa23.35■■□□□ 1.33
CCHCR1-228ENST00000509552 PIK3C2BO00750 1634 aa23.35■■□□□ 1.33
CCHCR1-228ENST00000509552 GLI2P10070 1586 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 816.1 ms