RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RIMS2Q9UQ26 1411 aa28■■■□□ 2.07
UBE3D-207ENST00000509102 SPHKAPQ2M3C7 1700 aa27.96■■■□□ 2.07
UBE3D-207ENST00000509102 ZFYVE9O95405 1425 aa27.96■■■□□ 2.07
UBE3D-207ENST00000509102 SLC26A8Q96RN1 970 aa27.96■■■□□ 2.07
UBE3D-207ENST00000509102 MYO5BQ9ULV0 1848 aa27.96■■■□□ 2.07
UBE3D-207ENST00000509102 SCAF1Q9H7N4 1312 aaKnown RBP27.95■■■□□ 2.07
UBE3D-207ENST00000509102 LRRC7Q96NW7 1537 aa27.95■■■□□ 2.06
UBE3D-207ENST00000509102 PLEKHG1Q9ULL1 1385 aa27.94■■■□□ 2.06
UBE3D-207ENST00000509102 STRCP1A6NGW2 1772 aa27.93■■■□□ 2.06
UBE3D-207ENST00000509102 SLC4A1APQ9BWU0 796 aaKnown RBP27.91■■■□□ 2.06
UBE3D-207ENST00000509102 KCNA6P17658 529 aa27.9■■■□□ 2.06
UBE3D-207ENST00000509102 PIP4K2BP78356 416 aa27.9■■■□□ 2.06
UBE3D-207ENST00000509102 ZNF326Q5BKZ1 582 aaKnown RBP27.87■■■□□ 2.05
UBE3D-207ENST00000509102 TRPM2O94759 1503 aa27.87■■■□□ 2.05
UBE3D-207ENST00000509102 ACIN1Q9UKV3 1341 aaKnown RBP27.86■■■□□ 2.05
UBE3D-207ENST00000509102 NUTM2DQ5VT03 806 aaPredicted RBP27.84■■■□□ 2.05
UBE3D-207ENST00000509102 TBX22Q9Y458 520 aa27.83■■■□□ 2.05
UBE3D-207ENST00000509102 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.04
UBE3D-207ENST00000509102 PROSER2Q86WR7 435 aaPredicted RBP27.82■■■□□ 2.04
UBE3D-207ENST00000509102 DIP2AQ14689 1571 aa27.8■■■□□ 2.04
UBE3D-207ENST00000509102 CLTCL1P53675 1640 aa27.8■■■□□ 2.04
UBE3D-207ENST00000509102 NWD1Q149M9 1564 aa27.79■■■□□ 2.04
UBE3D-207ENST00000509102 TMEM94Q12767 1356 aa27.79■■■□□ 2.04
UBE3D-207ENST00000509102 KIF1BO60333 1816 aa27.76■■■□□ 2.04
UBE3D-207ENST00000509102 PIK3R4Q99570 1358 aa27.75■■■□□ 2.03
UBE3D-207ENST00000509102 ADAMTS13Q76LX8 1427 aa27.74■■■□□ 2.03
UBE3D-207ENST00000509102 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
UBE3D-207ENST00000509102 CHD2O14647 1828 aaKnown RBP27.72■■■□□ 2.03
UBE3D-207ENST00000509102 HSPA1LP34931 641 aa27.72■■■□□ 2.03
UBE3D-207ENST00000509102 XIRP1Q702N8 1843 aaKnown RBP27.71■■■□□ 2.03
UBE3D-207ENST00000509102 MPHOSPH9Q99550 1183 aa27.71■■■□□ 2.03
UBE3D-207ENST00000509102 MSH6P52701 1360 aa27.71■■■□□ 2.03
UBE3D-207ENST00000509102 ALKQ9UM73 1620 aa27.7■■■□□ 2.03
UBE3D-207ENST00000509102 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
UBE3D-207ENST00000509102 RBM33Q96EV2 1170 aaKnown RBP27.68■■■□□ 2.02
UBE3D-207ENST00000509102 SETBP1Q9Y6X0 1596 aa27.68■■■□□ 2.02
UBE3D-207ENST00000509102 CCDC144AA2RUR9 1427 aa27.67■■■□□ 2.02
UBE3D-207ENST00000509102 NEXMIFQ5QGS0 1516 aa27.67■■■□□ 2.02
UBE3D-207ENST00000509102 VGFO15240 615 aaPredicted RBP27.67■■■□□ 2.02
UBE3D-207ENST00000509102 FOXD1Q16676 465 aa27.67■■■□□ 2.02
UBE3D-207ENST00000509102 C14orf37Q86TY3 774 aa27.67■■■□□ 2.02
UBE3D-207ENST00000509102 RPGRIP1LQ68CZ1 1315 aa27.67■■■□□ 2.02
UBE3D-207ENST00000509102 NCOA3Q9Y6Q9 1424 aa27.65■■■□□ 2.02
UBE3D-207ENST00000509102 AMOTL2Q9Y2J4 779 aa27.63■■■□□ 2.01
UBE3D-207ENST00000509102 RAB3GAP2Q9H2M9 1393 aa27.61■■■□□ 2.01
UBE3D-207ENST00000509102 NRXN3Q9Y4C0 1643 aa27.6■■■□□ 2.01
UBE3D-207ENST00000509102 FAM135BQ49AJ0 1406 aa27.59■■■□□ 2.01
UBE3D-207ENST00000509102 PTPRUQ92729 1446 aa27.55■■■□□ 2
UBE3D-207ENST00000509102 METP08581 1390 aa27.54■■■□□ 2
UBE3D-207ENST00000509102 ATF3P18847 181 aa27.54■■■□□ 2
UBE3D-207ENST00000509102 CADPS2Q86UW7 1296 aa27.54■■■□□ 2
UBE3D-207ENST00000509102 C19orf44Q9H6X5 657 aa27.54■■■□□ 2
UBE3D-207ENST00000509102 SLAIN2Q9P270 581 aa27.54■■■□□ 2
UBE3D-207ENST00000509102 RGL3Q3MIN7 710 aa27.52■■■□□ 2
UBE3D-207ENST00000509102 XRN1Q8IZH2 1706 aaKnown RBP27.52■■■□□ 2
UBE3D-207ENST00000509102 PPLO60437 1756 aa27.51■■□□□ 1.99
UBE3D-207ENST00000509102 ROBO1Q9Y6N7 1651 aa27.5■■□□□ 1.99
UBE3D-207ENST00000509102 ANKRD30BQ9BXX2 1392 aa27.49■■□□□ 1.99
UBE3D-207ENST00000509102 HRCP23327 699 aa27.48■■□□□ 1.99
UBE3D-207ENST00000509102 SPATA31E1Q6ZUB1 1445 aa27.48■■□□□ 1.99
UBE3D-207ENST00000509102 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.45■■□□□ 1.99
UBE3D-207ENST00000509102 DCCP43146 1447 aa27.45■■□□□ 1.98
UBE3D-207ENST00000509102 MED1Q15648 1581 aaPredicted RBP27.44■■□□□ 1.98
UBE3D-207ENST00000509102 PTCH1Q13635 1447 aa27.41■■□□□ 1.98
UBE3D-207ENST00000509102 ADGRF5Q8IZF2 1346 aa27.4■■□□□ 1.98
UBE3D-207ENST00000509102 SETD1AO15047 1707 aaKnown RBP27.39■■□□□ 1.98
UBE3D-207ENST00000509102 ADGRL3Q9HAR2 1447 aa27.38■■□□□ 1.97
UBE3D-207ENST00000509102 IFT172Q9UG01 1749 aa27.37■■□□□ 1.97
UBE3D-207ENST00000509102 PHLPP1O60346 1717 aa27.35■■□□□ 1.97
UBE3D-207ENST00000509102 PRAG1Q86YV5 1406 aa27.34■■□□□ 1.97
UBE3D-207ENST00000509102 ROBO2Q9HCK4 1378 aa27.33■■□□□ 1.97
UBE3D-207ENST00000509102 PIK3C2GO75747 1445 aa27.33■■□□□ 1.96
UBE3D-207ENST00000509102 ILDR2Q71H61 639 aa27.32■■□□□ 1.96
UBE3D-207ENST00000509102 NALCNQ8IZF0 1738 aa27.3■■□□□ 1.96
UBE3D-207ENST00000509102 BRINP3Q76B58 766 aa27.29■■□□□ 1.96
UBE3D-207ENST00000509102 JCADQ9P266 1359 aa27.29■■□□□ 1.96
UBE3D-207ENST00000509102 MST1RQ04912 1400 aa27.29■■□□□ 1.96
UBE3D-207ENST00000509102 MYOM2P54296 1465 aa27.29■■□□□ 1.96
UBE3D-207ENST00000509102 STK26Q9P289 416 aa27.27■■□□□ 1.96
UBE3D-207ENST00000509102 AHDC1Q5TGY3 1603 aaPredicted RBP27.27■■□□□ 1.96
UBE3D-207ENST00000509102 LRPPRCP42704 1394 aaKnown RBP27.26■■□□□ 1.95
UBE3D-207ENST00000509102 ASXL1Q8IXJ9 1541 aa27.24■■□□□ 1.95
UBE3D-207ENST00000509102 LAMC1P11047 1609 aa27.23■■□□□ 1.95
UBE3D-207ENST00000509102 COL16A1Q07092 1604 aaPredicted RBP27.23■■□□□ 1.95
UBE3D-207ENST00000509102 TMEM132EQ6IEE7 984 aa27.23■■□□□ 1.95
UBE3D-207ENST00000509102 C14orf93Q9H972 538 aaKnown RBP27.23■■□□□ 1.95
UBE3D-207ENST00000509102 NRXN1Q9ULB1 1477 aa27.23■■□□□ 1.95
UBE3D-207ENST00000509102 TECPR2O15040 1411 aa27.23■■□□□ 1.95
UBE3D-207ENST00000509102 ABCC11Q96J66 1382 aa27.22■■□□□ 1.95
UBE3D-207ENST00000509102 STAC3Q96MF2 364 aa27.22■■□□□ 1.95
UBE3D-207ENST00000509102 DHX57Q6P158 1386 aaKnown RBP27.21■■□□□ 1.95
UBE3D-207ENST00000509102 YTHDC2Q9H6S0 1430 aaKnown RBP27.2■■□□□ 1.94
UBE3D-207ENST00000509102 DCAF11Q8TEB1 546 aa27.19■■□□□ 1.94
UBE3D-207ENST00000509102 C1orf167Q5SNV9 1468 aa27.19■■□□□ 1.94
UBE3D-207ENST00000509102 KNDC1Q76NI1 1749 aa27.19■■□□□ 1.94
UBE3D-207ENST00000509102 CFAP70Q5T0N1 1121 aa27.18■■□□□ 1.94
UBE3D-207ENST00000509102 SPATA31A6Q5VVP1 1343 aa27.17■■□□□ 1.94
UBE3D-207ENST00000509102 SOCS7O14512 581 aa27.17■■□□□ 1.94
UBE3D-207ENST00000509102 KDM2AQ9Y2K7 1162 aa27.17■■□□□ 1.94
UBE3D-207ENST00000509102 CDC42BPGQ6DT37 1551 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms