RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 NUTM2DQ5VT03 806 aaPredicted RBP36.07■■■■□ 3.36
SRPK1-210ENST00000508473 SLC26A8Q96RN1 970 aa36.07■■■■□ 3.36
SRPK1-210ENST00000508473 HDGFP51858 240 aaKnown RBP36.06■■■■□ 3.36
SRPK1-210ENST00000508473 SETD5Q9C0A6 1442 aa36.02■■■■□ 3.36
SRPK1-210ENST00000508473 UBAP1LF5GYI3 381 aa36.01■■■■□ 3.36
SRPK1-210ENST00000508473 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.01■■■■□ 3.36
SRPK1-210ENST00000508473 FOXD1Q16676 465 aa36■■■■□ 3.35
SRPK1-210ENST00000508473 STRCP1A6NGW2 1772 aa35.99■■■■□ 3.35
SRPK1-210ENST00000508473 TRPM2O94759 1503 aa35.99■■■■□ 3.35
SRPK1-210ENST00000508473 PLEKHG1Q9ULL1 1385 aa35.98■■■■□ 3.35
SRPK1-210ENST00000508473 ZNF326Q5BKZ1 582 aaKnown RBP35.97■■■■□ 3.35
SRPK1-210ENST00000508473 CLTCL1P53675 1640 aa35.97■■■■□ 3.35
SRPK1-210ENST00000508473 MPHOSPH9Q99550 1183 aa35.96■■■■□ 3.35
SRPK1-210ENST00000508473 LRRC7Q96NW7 1537 aa35.93■■■■□ 3.34
SRPK1-210ENST00000508473 RAB3GAP2Q9H2M9 1393 aa35.9■■■■□ 3.34
SRPK1-210ENST00000508473 KCNA6P17658 529 aa35.89■■■■□ 3.34
SRPK1-210ENST00000508473 ACIN1Q9UKV3 1341 aaKnown RBP35.83■■■■□ 3.33
SRPK1-210ENST00000508473 TOM1O60784 492 aa35.83■■■■□ 3.33
SRPK1-210ENST00000508473 TBX22Q9Y458 520 aa35.83■■■■□ 3.33
SRPK1-210ENST00000508473 ADAMTS13Q76LX8 1427 aa35.83■■■■□ 3.33
SRPK1-210ENST00000508473 SCAF1Q9H7N4 1312 aaKnown RBP35.82■■■■□ 3.32
SRPK1-210ENST00000508473 PIP4K2BP78356 416 aa35.81■■■■□ 3.32
SRPK1-210ENST00000508473 KIF1BO60333 1816 aa35.79■■■■□ 3.32
SRPK1-210ENST00000508473 PROSER2Q86WR7 435 aaPredicted RBP35.79■■■■□ 3.32
SRPK1-210ENST00000508473 RBM33Q96EV2 1170 aaKnown RBP35.79■■■■□ 3.32
SRPK1-210ENST00000508473 TMEM94Q12767 1356 aa35.76■■■■□ 3.31
SRPK1-210ENST00000508473 NEXMIFQ5QGS0 1516 aa35.75■■■■□ 3.31
SRPK1-210ENST00000508473 CCDC144AA2RUR9 1427 aa35.74■■■■□ 3.31
SRPK1-210ENST00000508473 NWD1Q149M9 1564 aa35.73■■■■□ 3.31
SRPK1-210ENST00000508473 NKTRP30414 1462 aaKnown RBP35.7■■■■□ 3.31
SRPK1-210ENST00000508473 DIP2AQ14689 1571 aa35.7■■■■□ 3.31
SRPK1-210ENST00000508473 ALKQ9UM73 1620 aa35.69■■■■□ 3.3
SRPK1-210ENST00000508473 XIRP1Q702N8 1843 aaKnown RBP35.68■■■■□ 3.3
SRPK1-210ENST00000508473 CHD2O14647 1828 aaKnown RBP35.67■■■■□ 3.3
SRPK1-210ENST00000508473 RGL3Q3MIN7 710 aa35.67■■■■□ 3.3
SRPK1-210ENST00000508473 RPGRIP1LQ68CZ1 1315 aa35.66■■■■□ 3.3
SRPK1-210ENST00000508473 NRXN3Q9Y4C0 1643 aa35.66■■■■□ 3.3
SRPK1-210ENST00000508473 SETBP1Q9Y6X0 1596 aa35.66■■■■□ 3.3
SRPK1-210ENST00000508473 PIK3R4Q99570 1358 aa35.65■■■■□ 3.3
SRPK1-210ENST00000508473 VGFO15240 615 aaPredicted RBP35.65■■■■□ 3.3
SRPK1-210ENST00000508473 AMOTL2Q9Y2J4 779 aa35.64■■■■□ 3.3
SRPK1-210ENST00000508473 HRCP23327 699 aa35.63■■■■□ 3.29
SRPK1-210ENST00000508473 PTPRUQ92729 1446 aa35.62■■■■□ 3.29
SRPK1-210ENST00000508473 METP08581 1390 aa35.61■■■■□ 3.29
SRPK1-210ENST00000508473 SPATA31E1Q6ZUB1 1445 aa35.59■■■■□ 3.29
SRPK1-210ENST00000508473 HSPA1LP34931 641 aa35.59■■■■□ 3.29
SRPK1-210ENST00000508473 MSH6P52701 1360 aa35.54■■■■□ 3.28
SRPK1-210ENST00000508473 C14orf37Q86TY3 774 aa35.54■■■■□ 3.28
SRPK1-210ENST00000508473 PPLO60437 1756 aa35.53■■■■□ 3.28
SRPK1-210ENST00000508473 ADGRF5Q8IZF2 1346 aa35.52■■■■□ 3.28
SRPK1-210ENST00000508473 ANKRD30BQ9BXX2 1392 aa35.5■■■■□ 3.27
SRPK1-210ENST00000508473 NCOA3Q9Y6Q9 1424 aa35.46■■■■□ 3.27
SRPK1-210ENST00000508473 XRN1Q8IZH2 1706 aaKnown RBP35.45■■■■□ 3.27
SRPK1-210ENST00000508473 C19orf44Q9H6X5 657 aa35.41■■■■□ 3.26
SRPK1-210ENST00000508473 SLAIN2Q9P270 581 aa35.39■■■■□ 3.26
SRPK1-210ENST00000508473 SETD1AO15047 1707 aaKnown RBP35.39■■■■□ 3.26
SRPK1-210ENST00000508473 FAM135BQ49AJ0 1406 aa35.39■■■■□ 3.26
SRPK1-210ENST00000508473 IFT172Q9UG01 1749 aa35.38■■■■□ 3.25
SRPK1-210ENST00000508473 ATF3P18847 181 aa35.36■■■■□ 3.25
SRPK1-210ENST00000508473 CADPS2Q86UW7 1296 aa35.34■■■■□ 3.25
SRPK1-210ENST00000508473 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.32■■■■□ 3.25
SRPK1-210ENST00000508473 ROBO2Q9HCK4 1378 aa35.32■■■■□ 3.24
SRPK1-210ENST00000508473 PIK3C2GO75747 1445 aa35.32■■■■□ 3.24
SRPK1-210ENST00000508473 ROBO1Q9Y6N7 1651 aa35.3■■■■□ 3.24
SRPK1-210ENST00000508473 DISP3Q9P2K9 1392 aa35.29■■■■□ 3.24
SRPK1-210ENST00000508473 TMEM132EQ6IEE7 984 aa35.29■■■■□ 3.24
SRPK1-210ENST00000508473 STK26Q9P289 416 aa35.28■■■■□ 3.24
SRPK1-210ENST00000508473 PTCH1Q13635 1447 aa35.28■■■■□ 3.24
SRPK1-210ENST00000508473 KDM2AQ9Y2K7 1162 aa35.26■■■■□ 3.24
SRPK1-210ENST00000508473 MYOM2P54296 1465 aa35.26■■■■□ 3.23
SRPK1-210ENST00000508473 ADGRL3Q9HAR2 1447 aa35.24■■■■□ 3.23
SRPK1-210ENST00000508473 CFAP70Q5T0N1 1121 aa35.24■■■■□ 3.23
SRPK1-210ENST00000508473 NRXN1Q9ULB1 1477 aa35.23■■■■□ 3.23
SRPK1-210ENST00000508473 DCAF11Q8TEB1 546 aa35.23■■■■□ 3.23
SRPK1-210ENST00000508473 C14orf93Q9H972 538 aaKnown RBP35.23■■■■□ 3.23
SRPK1-210ENST00000508473 DCCP43146 1447 aa35.22■■■■□ 3.23
SRPK1-210ENST00000508473 ASXL1Q8IXJ9 1541 aa35.22■■■■□ 3.23
SRPK1-210ENST00000508473 PRAG1Q86YV5 1406 aa35.21■■■■□ 3.23
SRPK1-210ENST00000508473 LRPPRCP42704 1394 aaKnown RBP35.2■■■■□ 3.23
SRPK1-210ENST00000508473 TRIM26Q12899 539 aaPredicted RBP35.17■■■■□ 3.22
SRPK1-210ENST00000508473 NALCNQ8IZF0 1738 aa35.17■■■■□ 3.22
SRPK1-210ENST00000508473 DHX57Q6P158 1386 aaKnown RBP35.15■■■■□ 3.22
SRPK1-210ENST00000508473 WAPLQ7Z5K2 1190 aa35.15■■■■□ 3.22
SRPK1-210ENST00000508473 MST1RQ04912 1400 aa35.15■■■■□ 3.22
SRPK1-210ENST00000508473 YTHDC2Q9H6S0 1430 aaKnown RBP35.15■■■■□ 3.22
SRPK1-210ENST00000508473 ABCC11Q96J66 1382 aa35.14■■■■□ 3.22
SRPK1-210ENST00000508473 BRINP3Q76B58 766 aa35.13■■■■□ 3.21
SRPK1-210ENST00000508473 TECPR2O15040 1411 aa35.12■■■■□ 3.21
SRPK1-210ENST00000508473 PLEKHH1Q9ULM0 1364 aa35.1■■■■□ 3.21
SRPK1-210ENST00000508473 MED1Q15648 1581 aaPredicted RBP35.09■■■■□ 3.21
SRPK1-210ENST00000508473 LAMC1P11047 1609 aa35.07■■■■□ 3.21
SRPK1-210ENST00000508473 PHLPP1O60346 1717 aa35.07■■■■□ 3.2
SRPK1-210ENST00000508473 STAC3Q96MF2 364 aa35.07■■■■□ 3.2
SRPK1-210ENST00000508473 ILDR2Q71H61 639 aa35.04■■■■□ 3.2
SRPK1-210ENST00000508473 KNDC1Q76NI1 1749 aa35.03■■■■□ 3.2
SRPK1-210ENST00000508473 C1orf167Q5SNV9 1468 aa35.03■■■■□ 3.2
SRPK1-210ENST00000508473 SIN3AQ96ST3 1273 aa35.02■■■■□ 3.2
SRPK1-210ENST00000508473 SIRT1Q96EB6 747 aa35■■■■□ 3.19
SRPK1-210ENST00000508473 AHDC1Q5TGY3 1603 aaPredicted RBP34.99■■■■□ 3.19
SRPK1-210ENST00000508473 DDX17Q92841 729 aaKnown RBP34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms