RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 REREQ9P2R6 1566 aa24.17■■□□□ 1.46
SFXN1-208ENST00000507823 WASHC2CQ9Y4E1 1318 aa24.17■■□□□ 1.46
SFXN1-208ENST00000507823 PER1O15534 1290 aaPredicted RBP24.16■■□□□ 1.46
SFXN1-208ENST00000507823 RALBP1Q15311 655 aa24.16■■□□□ 1.46
SFXN1-208ENST00000507823 GGT6Q6P531 493 aa24.16■■□□□ 1.46
SFXN1-208ENST00000507823 SETBP1Q9Y6X0 1596 aa24.15■■□□□ 1.46
SFXN1-208ENST00000507823 SYNMO15061 1565 aa24.13■■□□□ 1.45
SFXN1-208ENST00000507823 PARD3Q8TEW0 1356 aa24.13■■□□□ 1.45
SFXN1-208ENST00000507823 FAM69CQ0P6D2 419 aa24.13■■□□□ 1.45
SFXN1-208ENST00000507823 EIF3AQ14152 1382 aaKnown RBP24.12■■□□□ 1.45
SFXN1-208ENST00000507823 BRD4O60885 1362 aaPredicted RBP24.12■■□□□ 1.45
SFXN1-208ENST00000507823 MYO3AQ8NEV4 1616 aa24.12■■□□□ 1.45
SFXN1-208ENST00000507823 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
SFXN1-208ENST00000507823 ZBED9Q6R2W3 1325 aa24.11■■□□□ 1.45
SFXN1-208ENST00000507823 ADGRF5Q8IZF2 1346 aa24.11■■□□□ 1.45
SFXN1-208ENST00000507823 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
SFXN1-208ENST00000507823 CFAP65Q6ZU64 1925 aaKnown RBP24.09■■□□□ 1.45
SFXN1-208ENST00000507823 FAM9BQ8IZU0 186 aa24.09■■□□□ 1.45
SFXN1-208ENST00000507823 AGLP35573 1532 aa24.09■■□□□ 1.45
SFXN1-208ENST00000507823 PIK3C2GO75747 1445 aa24.08■■□□□ 1.45
SFXN1-208ENST00000507823 SLC24A1O60721 1099 aa24.06■■□□□ 1.44
SFXN1-208ENST00000507823 PNISRQ8TF01 805 aaKnown RBP24.06■■□□□ 1.44
SFXN1-208ENST00000507823 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
SFXN1-208ENST00000507823 CDCA8Q53HL2 280 aa24.05■■□□□ 1.44
SFXN1-208ENST00000507823 TSPOAP1O95153 1857 aa24.05■■□□□ 1.44
SFXN1-208ENST00000507823 CFAP70Q5T0N1 1121 aa24.05■■□□□ 1.44
SFXN1-208ENST00000507823 SBNO2Q9Y2G9 1366 aa24.05■■□□□ 1.44
SFXN1-208ENST00000507823 MYOM1P52179 1685 aa24.04■■□□□ 1.44
SFXN1-208ENST00000507823 KIF13AQ9H1H9 1805 aa24.03■■□□□ 1.44
SFXN1-208ENST00000507823 ADGRB1O14514 1584 aa24.03■■□□□ 1.44
SFXN1-208ENST00000507823 PREX1Q8TCU6 1659 aa24.03■■□□□ 1.44
SFXN1-208ENST00000507823 NEXMIFQ5QGS0 1516 aa24.02■■□□□ 1.44
SFXN1-208ENST00000507823 PANK3Q9H999 370 aa24.01■■□□□ 1.43
SFXN1-208ENST00000507823 KDM5AP29375 1690 aaKnown RBP24.01■■□□□ 1.43
SFXN1-208ENST00000507823 C14orf93Q9H972 538 aaKnown RBP24■■□□□ 1.43
SFXN1-208ENST00000507823 ZFYVE9O95405 1425 aa23.99■■□□□ 1.43
SFXN1-208ENST00000507823 NLRP13Q86W25 1043 aa23.99■■□□□ 1.43
SFXN1-208ENST00000507823 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
SFXN1-208ENST00000507823 TMC1Q8TDI8 760 aa23.98■■□□□ 1.43
SFXN1-208ENST00000507823 ERVK-7P63135 1459 aa23.98■■□□□ 1.43
SFXN1-208ENST00000507823 SLC52A1Q9NWF4 448 aa23.97■■□□□ 1.43
SFXN1-208ENST00000507823 INSRP06213 1382 aa23.97■■□□□ 1.43
SFXN1-208ENST00000507823 FKBP8Q14318 412 aa23.95■■□□□ 1.42
SFXN1-208ENST00000507823 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
SFXN1-208ENST00000507823 NPC1L1Q9UHC9 1359 aa23.95■■□□□ 1.42
SFXN1-208ENST00000507823 NEFLP07196 543 aa23.94■■□□□ 1.42
SFXN1-208ENST00000507823 ARHGEF40Q8TER5 1519 aa23.93■■□□□ 1.42
SFXN1-208ENST00000507823 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
SFXN1-208ENST00000507823 IDI1Q13907 227 aa23.91■■□□□ 1.42
SFXN1-208ENST00000507823 CNGB1Q14028 1251 aaPredicted RBP23.9■■□□□ 1.42
SFXN1-208ENST00000507823 ASXL1Q8IXJ9 1541 aa23.9■■□□□ 1.42
SFXN1-208ENST00000507823 SMG6Q86US8 1419 aaKnown RBP23.9■■□□□ 1.42
SFXN1-208ENST00000507823 VGFO15240 615 aaPredicted RBP23.9■■□□□ 1.42
SFXN1-208ENST00000507823 MYO5BQ9ULV0 1848 aa23.89■■□□□ 1.41
SFXN1-208ENST00000507823 QRICH2Q9H0J4 1663 aa23.88■■□□□ 1.41
SFXN1-208ENST00000507823 AMER1Q5JTC6 1135 aaPredicted RBP23.88■■□□□ 1.41
SFXN1-208ENST00000507823 CENPJQ9HC77 1338 aaPredicted RBP23.87■■□□□ 1.41
SFXN1-208ENST00000507823 SPATA31D1Q6ZQQ2 1576 aa23.86■■□□□ 1.41
SFXN1-208ENST00000507823 ARHGEF28Q8N1W1 1705 aaKnown RBP23.85■■□□□ 1.41
SFXN1-208ENST00000507823 CC2D1BQ5T0F9 858 aaKnown RBP23.84■■□□□ 1.41
SFXN1-208ENST00000507823 KNSTRNQ9Y448 316 aa23.84■■□□□ 1.41
SFXN1-208ENST00000507823 CLTCQ00610 1675 aaKnown RBP23.84■■□□□ 1.41
SFXN1-208ENST00000507823 PELP1Q8IZL8 1130 aaKnown RBP23.84■■□□□ 1.41
SFXN1-208ENST00000507823 ERICH6BQ5W0A0 696 aa23.83■■□□□ 1.41
SFXN1-208ENST00000507823 PUS7Q96PZ0 661 aaKnown RBP23.81■■□□□ 1.4
SFXN1-208ENST00000507823 BLMP54132 1417 aaPredicted RBP23.81■■□□□ 1.4
SFXN1-208ENST00000507823 NUDCQ9Y266 331 aa23.78■■□□□ 1.4
SFXN1-208ENST00000507823 TRAK1Q9UPV9 953 aa23.77■■□□□ 1.4
SFXN1-208ENST00000507823 FBXO31Q5XUX0 539 aaPredicted RBP23.76■■□□□ 1.39
SFXN1-208ENST00000507823 TMEM132EQ6IEE7 984 aa23.76■■□□□ 1.39
SFXN1-208ENST00000507823 PPP2R1AP30153 589 aa23.75■■□□□ 1.39
SFXN1-208ENST00000507823 USP32Q8NFA0 1604 aa23.74■■□□□ 1.39
SFXN1-208ENST00000507823 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
SFXN1-208ENST00000507823 TULP4Q9NRJ4 1543 aa23.73■■□□□ 1.39
SFXN1-208ENST00000507823 A2ML1A8K2U0 1454 aa23.72■■□□□ 1.39
SFXN1-208ENST00000507823 CARD14Q9BXL6 1004 aa23.72■■□□□ 1.39
SFXN1-208ENST00000507823 BCANQ96GW7 911 aa23.71■■□□□ 1.39
SFXN1-208ENST00000507823 ALKQ9UM73 1620 aa23.69■■□□□ 1.38
SFXN1-208ENST00000507823 PTPRMP28827 1452 aa23.69■■□□□ 1.38
SFXN1-208ENST00000507823 PDE3BQ13370 1112 aa23.68■■□□□ 1.38
SFXN1-208ENST00000507823 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
SFXN1-208ENST00000507823 SETD1AO15047 1707 aaKnown RBP23.66■■□□□ 1.38
SFXN1-208ENST00000507823 EVC2Q86UK5 1308 aa23.65■■□□□ 1.38
SFXN1-208ENST00000507823 YTHDC2Q9H6S0 1430 aaKnown RBP23.65■■□□□ 1.38
SFXN1-208ENST00000507823 DLC1Q96QB1 1528 aa23.63■■□□□ 1.37
SFXN1-208ENST00000507823 ZMYM3Q14202 1370 aa23.62■■□□□ 1.37
SFXN1-208ENST00000507823 NINLQ9Y2I6 1382 aa23.62■■□□□ 1.37
SFXN1-208ENST00000507823 NSD3Q9BZ95 1437 aa23.61■■□□□ 1.37
SFXN1-208ENST00000507823 RIMS2Q9UQ26 1411 aa23.61■■□□□ 1.37
SFXN1-208ENST00000507823 ANKRD36BQ8N2N9 1353 aa23.59■■□□□ 1.37
SFXN1-208ENST00000507823 SLC12A5Q9H2X9 1139 aa23.59■■□□□ 1.37
SFXN1-208ENST00000507823 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
SFXN1-208ENST00000507823 PPP4R2Q9NY27 417 aa23.59■■□□□ 1.37
SFXN1-208ENST00000507823 ADAMTS8Q9UP79 889 aa23.59■■□□□ 1.37
SFXN1-208ENST00000507823 NRXN3Q9Y4C0 1643 aa23.57■■□□□ 1.36
SFXN1-208ENST00000507823 IRX6P78412 446 aaPredicted RBP23.57■■□□□ 1.36
SFXN1-208ENST00000507823 POLR3AO14802 1390 aaPredicted RBP23.56■■□□□ 1.36
SFXN1-208ENST00000507823 STAG3Q9UJ98 1225 aa23.56■■□□□ 1.36
SFXN1-208ENST00000507823 MLECQ14165 292 aa23.56■■□□□ 1.36
SFXN1-208ENST00000507823 NSD2O96028 1365 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms